RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 TMEM100Q9NV29 134 aa7.2□□□□□ -1.26
SPG11-209ENST00000558253 ZNF701Q9NV72 531 aaPredicted RBP7.2□□□□□ -1.26
SPG11-209ENST00000558253 MBD2Q9UBB5 411 aa7.2□□□□□ -1.26
SPG11-209ENST00000558253 ZNF230Q9UIE0 474 aaPredicted RBP7.2□□□□□ -1.26
SPG11-209ENST00000558253 AK3Q9UIJ7 227 aa7.2□□□□□ -1.26
SPG11-209ENST00000558253 TUBD1Q9UJT1 453 aa7.2□□□□□ -1.26
SPG11-209ENST00000558253 MPC1Q9Y5U8 109 aa7.2□□□□□ -1.26
SPG11-209ENST00000558253 SZT2Q5T011 3432 aa7.2□□□□□ -1.26
SPG11-209ENST00000558253 KIR2DS1A0A191URI9 304 aa7.19□□□□□ -1.26
SPG11-209ENST00000558253 DUXBA0A1W2PPF3 345 aa7.19□□□□□ -1.26
SPG11-209ENST00000558253 PQLC2LA1A4F0 135 aa7.19□□□□□ -1.26
SPG11-209ENST00000558253 C5orf63A6NC05 138 aa7.19□□□□□ -1.26
SPG11-209ENST00000558253 PINLYPA6NC86 204 aa7.19□□□□□ -1.26
SPG11-209ENST00000558253 OR5B21A6NL26 309 aa7.19□□□□□ -1.26
SPG11-209ENST00000558253 CCSO14618 274 aa7.19□□□□□ -1.26
SPG11-209ENST00000558253 CDX4O14627 284 aaPredicted RBP7.19□□□□□ -1.26
SPG11-209ENST00000558253 FGF16O43320 207 aa7.19□□□□□ -1.26
SPG11-209ENST00000558253 GAPDHP04406 335 aaKnown RBP7.19□□□□□ -1.26
SPG11-209ENST00000558253 ZNF728P0DKX0 622 aa7.19□□□□□ -1.26
SPG11-209ENST00000558253 TUBG1P23258 451 aa7.19□□□□□ -1.26
SPG11-209ENST00000558253 GLRA1P23415 457 aa7.19□□□□□ -1.26
SPG11-209ENST00000558253 KIR2DS4P43632 304 aa7.19□□□□□ -1.26
SPG11-209ENST00000558253 LUMP51884 338 aaPredicted RBP7.19□□□□□ -1.26
SPG11-209ENST00000558253 MRPL49Q13405 166 aaKnown RBP7.19□□□□□ -1.26
SPG11-209ENST00000558253 RBM39Q14498 530 aaKnown RBP7.19□□□□□ -1.26
SPG11-209ENST00000558253 KIR2DS1Q14954 304 aa7.19□□□□□ -1.26
SPG11-209ENST00000558253 NKAPLQ5M9Q1 402 aa7.19□□□□□ -1.26
SPG11-209ENST00000558253 GPR157Q5UAW9 335 aa7.19□□□□□ -1.26
SPG11-209ENST00000558253 C20orf204Q6ZNR8 217 aa7.19□□□□□ -1.26
SPG11-209ENST00000558253 MRPL21Q7Z2W9 205 aaKnown RBP7.19□□□□□ -1.26
SPG11-209ENST00000558253 RNF144BQ7Z419 303 aa7.19□□□□□ -1.26
SPG11-209ENST00000558253 C6orf201Q7Z4U5 140 aa7.19□□□□□ -1.26
SPG11-209ENST00000558253 ZNF573Q86YE8 665 aa7.19□□□□□ -1.26
SPG11-209ENST00000558253 ZDHHC23Q8IYP9 409 aa7.19□□□□□ -1.26
SPG11-209ENST00000558253 LGI3Q8N145 548 aa7.19□□□□□ -1.26
SPG11-209ENST00000558253 FBXL14Q8N1E6 418 aa7.19□□□□□ -1.26
SPG11-209ENST00000558253 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.19□□□□□ -1.26
SPG11-209ENST00000558253 TMEM178AQ8NBL3 297 aa7.19□□□□□ -1.26
SPG11-209ENST00000558253 CLRN3Q8NCR9 226 aa7.19□□□□□ -1.26
SPG11-209ENST00000558253 MDS2Q8NDY4 140 aa7.19□□□□□ -1.26
SPG11-209ENST00000558253 ABHD3Q8WU67 409 aa7.19□□□□□ -1.26
SPG11-209ENST00000558253 PIGCQ92535 297 aa7.19□□□□□ -1.26
SPG11-209ENST00000558253 MARC2Q969Z3 335 aa7.19□□□□□ -1.26
SPG11-209ENST00000558253 MOB3AQ96BX8 217 aa7.19□□□□□ -1.26
SPG11-209ENST00000558253 ABHD14BQ96IU4 210 aa7.19□□□□□ -1.26
SPG11-209ENST00000558253 FAAP24Q9BTP7 215 aa7.19□□□□□ -1.26
SPG11-209ENST00000558253 RNF126Q9BV68 326 aa7.19□□□□□ -1.26
SPG11-209ENST00000558253 TUBG2Q9NRH3 451 aa7.19□□□□□ -1.26
SPG11-209ENST00000558253 SLC7A10Q9NS82 523 aa7.19□□□□□ -1.26
SPG11-209ENST00000558253 FOXJ2Q9P0K8 574 aa7.19□□□□□ -1.26
SPG11-209ENST00000558253 NDRG3Q9UGV2 375 aa7.19□□□□□ -1.26
SPG11-209ENST00000558253 ST3GAL6Q9Y274 331 aa7.19□□□□□ -1.26
SPG11-209ENST00000558253 ALPK2Q86TB3 2170 aa7.19□□□□□ -1.26
SPG11-209ENST00000558253 CACNA1CQ13936 2221 aa7.18□□□□□ -1.26
SPG11-209ENST00000558253 IGKV1-27A0A075B6S5 117 aa7.18□□□□□ -1.26
SPG11-209ENST00000558253 TRBV6-6A0A0A6YYG2 114 aa7.18□□□□□ -1.26
SPG11-209ENST00000558253 ZNF98A6NK75 572 aa7.18□□□□□ -1.26
SPG11-209ENST00000558253 H7C1Q1 480 aa7.18□□□□□ -1.26
SPG11-209ENST00000558253 SDCBPO00560 298 aaPredicted RBP7.18□□□□□ -1.26
SPG11-209ENST00000558253 SS18L1O75177 396 aaPredicted RBP7.18□□□□□ -1.26
SPG11-209ENST00000558253 JTBO76095 146 aa7.18□□□□□ -1.26
SPG11-209ENST00000558253 TNFSF15O95150 251 aa7.18□□□□□ -1.26
SPG11-209ENST00000558253 CNOT4O95628 575 aaKnown RBP7.18□□□□□ -1.26
SPG11-209ENST00000558253 DIRAS3O95661 229 aa7.18□□□□□ -1.26
SPG11-209ENST00000558253 IFNA4P05014 189 aa7.18□□□□□ -1.26
SPG11-209ENST00000558253 LIPCP11150 499 aa7.18□□□□□ -1.26
SPG11-209ENST00000558253 EDN3P14138 238 aa7.18□□□□□ -1.26
SPG11-209ENST00000558253 ZNF250P15622 560 aa7.18□□□□□ -1.26
SPG11-209ENST00000558253 S100GP29377 79 aa7.18□□□□□ -1.26
SPG11-209ENST00000558253 FGF12P61328 243 aa7.18□□□□□ -1.26
SPG11-209ENST00000558253 HERV-K104P61576 105 aa7.18□□□□□ -1.26
SPG11-209ENST00000558253 RND3P61587 244 aa7.18□□□□□ -1.26
SPG11-209ENST00000558253 PPIAP62937 165 aaKnown RBP7.18□□□□□ -1.26
SPG11-209ENST00000558253 TGFBR3Q03167 851 aa7.18□□□□□ -1.26
SPG11-209ENST00000558253 HGFACQ04756 655 aa7.18□□□□□ -1.26
SPG11-209ENST00000558253 SLC9A3R2Q15599 337 aa7.18□□□□□ -1.26
SPG11-209ENST00000558253 TAF9Q16594 264 aa7.18□□□□□ -1.26
SPG11-209ENST00000558253 LPAL2Q16609 132 aa7.18□□□□□ -1.26
SPG11-209ENST00000558253 ANKRD55Q3KP44 614 aa7.18□□□□□ -1.26
SPG11-209ENST00000558253 LRRC37A5PQ49AS3 106 aa7.18□□□□□ -1.26
SPG11-209ENST00000558253 TCEAL6Q6IPX3 200 aa7.18□□□□□ -1.26
SPG11-209ENST00000558253 IL34Q6ZMJ4 242 aa7.18□□□□□ -1.26
SPG11-209ENST00000558253 NUFIP2Q7Z417 695 aaKnown RBP7.18□□□□□ -1.26
SPG11-209ENST00000558253 TMEM251Q8N6I4 163 aa7.18□□□□□ -1.26
SPG11-209ENST00000558253 CPEB3Q8NE35 698 aaKnown RBP7.18□□□□□ -1.26
SPG11-209ENST00000558253 OR10AD1Q8NGE0 317 aa7.18□□□□□ -1.26
SPG11-209ENST00000558253 OR2AE1Q8NHA4 323 aa7.18□□□□□ -1.26
SPG11-209ENST00000558253 TCEAL3Q969E4 200 aa7.18□□□□□ -1.26
SPG11-209ENST00000558253 ZNF845Q96IR2 970 aaPredicted RBP7.18□□□□□ -1.26
SPG11-209ENST00000558253 SIGLEC12Q96PQ1 595 aa7.18□□□□□ -1.26
SPG11-209ENST00000558253 RSRP1Q9BUV0 290 aa7.18□□□□□ -1.26
SPG11-209ENST00000558253 PKIBQ9C010 78 aa7.18□□□□□ -1.26
SPG11-209ENST00000558253 NAA60Q9H7X0 242 aa7.18□□□□□ -1.26
SPG11-209ENST00000558253 TAS2R3Q9NYW6 316 aa7.18□□□□□ -1.26
SPG11-209ENST00000558253 STARD10Q9Y365 291 aa7.18□□□□□ -1.26
SPG11-209ENST00000558253 TMED3Q9Y3Q3 217 aa7.18□□□□□ -1.26
SPG11-209ENST00000558253 POMT1Q9Y6A1 747 aa7.18□□□□□ -1.26
SPG11-209ENST00000558253 LRP5LA4QPB2 252 aa7.17□□□□□ -1.26
SPG11-209ENST00000558253 ANKRD30BLA7E2S9 258 aa7.17□□□□□ -1.26
SPG11-209ENST00000558253 E5RGE8 158 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms