RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 DEC1Q9P2X7 70 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 OR52A1Q9UKL2 312 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 FBXO5Q9UKT4 447 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 C2orf16Q68DN1 1984 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 ADAMTSL3P82987 1691 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 RTL9Q8NET4 1388 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 ABCC11Q96J66 1382 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 WDR97A6NE52 1622 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 CACNA1SQ13698 1873 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 SYNMO15061 1565 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 RIMS1Q86UR5 1692 aaKnown RBP1.94□□□□□ -2.1
SPG11-206ENST00000558093 IGHV1OR21-1A0A087WYE8 117 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 CENPVL3A0A0U1RRI6 287 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 ANKRD20A5PA0PJZ0 165 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 VPS37CA5D8V6 355 aaPredicted RBP1.94□□□□□ -2.1
SPG11-206ENST00000558093 OR6C6A6NF89 314 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 OR11H12B2RN74 326 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 RAD51CO43502 376 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 CLDN11O75508 207 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 RP2O75695 350 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 S1PR2O95136 353 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 PTTG1O95997 202 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 HBE1P02100 147 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 RLN2P04090 185 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 S100GP29377 79 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 KIR2DS4P43632 304 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 VDAC2P45880 294 aaPredicted RBP1.94□□□□□ -2.1
SPG11-206ENST00000558093 GABRA4P48169 554 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 TFPI2P48307 235 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 STC1P52823 247 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 KRTAP10-10P60014 251 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 RAB8AP61006 207 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 NAA20P61599 178 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 DEFA6Q01524 100 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 GUSBP1Q15486 140 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 OR1Q1Q15612 314 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 WHAMMP3Q1A5X7 153 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 TBC1D28Q2M2D7 210 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 NSUN5P1Q3KNT7 163 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 C11orf71Q6IPW1 123 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 MBOAT2Q6ZWT7 520 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 OLIG3Q7RTU3 272 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 CAMK2N1Q7Z7J9 78 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 SMIM20Q8N5G0 67 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 ATPAF2Q8N5M1 289 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 EIF4E3Q8N5X7 224 aaKnown RBP1.94□□□□□ -2.1
SPG11-206ENST00000558093 EID2Q8N6I1 236 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 METTL13Q8N6R0 699 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 PRELID2Q8N945 189 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 SLC26A10Q8NG04 563 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 OR11H1Q8NG94 326 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 OR8J3Q8NGG0 315 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 OR11H2Q8NH07 326 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 GRPEL2Q8TAA5 225 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 STOML3Q8TAV4 291 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 SYNPRQ8TBG9 265 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 ZNF502Q8TBZ5 544 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 FAM45AQ8TCE6 357 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 CASTOR1Q8WTX7 329 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 SMIM12Q96EX1 92 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 OR10C1Q96KK4 312 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 SCGB3A2Q96PL1 93 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 RBP7Q96R05 134 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 TBX5Q99593 518 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 FOXC2Q99958 501 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 C2orf88Q9BSF0 95 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 MED18Q9BUE0 208 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 KIFC1Q9BW19 673 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 TMEM59Q9BXS4 323 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 ACTR6Q9GZN1 396 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 MAP1LC3AQ9H492 121 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 CWH43Q9H720 699 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 HRASLS2Q9NWW9 162 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 CD84Q9UIB8 345 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 HHLA2Q9UM44 414 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 PRELID3BQ9Y3B1 194 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 UFC1Q9Y3C8 167 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 OR51B4Q9Y5P0 310 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 CNTNAP1P78357 1384 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 MYO5BQ9ULV0 1848 aa1.94□□□□□ -2.1
SPG11-206ENST00000558093 BICRAQ9NZM4 1560 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 CLUHO75153 1309 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 DOCK3Q8IZD9 2030 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 CCDC144AA2RUR9 1427 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 ISPDA4D126 451 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 CLDN24A6NM45 220 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 ZNF878C9JN71 531 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 M0QYV0 167 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 KPNA4O00629 521 aaPredicted RBP1.93□□□□□ -2.1
SPG11-206ENST00000558093 BHLHE40O14503 412 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 CDIPTO14735 213 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 PHYHO14832 338 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 AGPAT2O15120 278 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 CDC40O60508 579 aaKnown RBP eCLIP1.93□□□□□ -2.1
SPG11-206ENST00000558093 SLC16A7O60669 478 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 SERPINB7O75635 380 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 DCTN3O75935 186 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 LSM8O95777 96 aaKnown RBP1.93□□□□□ -2.1
SPG11-206ENST00000558093 MT-CO2P00403 227 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 GCGP01275 180 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms