RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 SFTPBP07988 381 aa10.29□□□□□ -0.76
SLIRP-209ENST00000557342 PRKACAP17612 351 aa10.29□□□□□ -0.76
SLIRP-209ENST00000557342 CRHBPP24387 322 aa10.29□□□□□ -0.76
SLIRP-209ENST00000557342 CEBPDP49716 269 aaPredicted RBP10.29□□□□□ -0.76
SLIRP-209ENST00000557342 RPS11P62280 158 aaKnown RBP eCLIP10.29□□□□□ -0.76
SLIRP-209ENST00000557342 ZNF146Q15072 292 aa10.29□□□□□ -0.76
SLIRP-209ENST00000557342 SPHARQ15513 63 aa10.29□□□□□ -0.76
SLIRP-209ENST00000557342 C1orf122Q6ZSJ8 110 aa10.29□□□□□ -0.76
SLIRP-209ENST00000557342 VMO1Q7Z5L0 202 aa10.29□□□□□ -0.76
SLIRP-209ENST00000557342 SATL1Q86VE3 508 aa10.29□□□□□ -0.76
SLIRP-209ENST00000557342 FAM185AQ8N0U4 392 aa10.29□□□□□ -0.76
SLIRP-209ENST00000557342 ASCC1Q8N9N2 400 aaKnown RBP10.29□□□□□ -0.76
SLIRP-209ENST00000557342 PXT1Q8NFP0 134 aa10.29□□□□□ -0.76
SLIRP-209ENST00000557342 OR51A2Q8NGJ7 313 aa10.29□□□□□ -0.76
SLIRP-209ENST00000557342 OR5D18Q8NGL1 313 aa10.29□□□□□ -0.76
SLIRP-209ENST00000557342 OR13C5Q8NGS8 318 aa10.29□□□□□ -0.76
SLIRP-209ENST00000557342 PPP1R35Q8TAP8 253 aa10.29□□□□□ -0.76
SLIRP-209ENST00000557342 ZFAND2BQ8WV99 257 aa10.29□□□□□ -0.76
SLIRP-209ENST00000557342 SNX22Q96L94 193 aa10.29□□□□□ -0.76
SLIRP-209ENST00000557342 MDFIQ99750 246 aa10.29□□□□□ -0.76
SLIRP-209ENST00000557342 ELL3Q9HB65 397 aaPredicted RBP10.29□□□□□ -0.76
SLIRP-209ENST00000557342 HMG20AQ9NP66 347 aa10.29□□□□□ -0.76
SLIRP-209ENST00000557342 RBFOX1Q9NWB1 397 aaKnown RBP10.29□□□□□ -0.76
SLIRP-209ENST00000557342 PAK1IP1Q9NWT1 392 aaPredicted RBP10.29□□□□□ -0.76
SLIRP-209ENST00000557342 IGKV1-12A0A0C4DH73 117 aa10.28□□□□□ -0.76
SLIRP-209ENST00000557342 CENPVL3A0A0U1RRI6 287 aa10.28□□□□□ -0.76
SLIRP-209ENST00000557342 TRIM77I1YAP6 450 aa10.28□□□□□ -0.76
SLIRP-209ENST00000557342 SH2D1BO14796 132 aa10.28□□□□□ -0.76
SLIRP-209ENST00000557342 GPX5O75715 221 aa10.28□□□□□ -0.76
SLIRP-209ENST00000557342 VENTXO95231 258 aa10.28□□□□□ -0.76
SLIRP-209ENST00000557342 IGKV1D-12P01611 117 aa10.28□□□□□ -0.76
SLIRP-209ENST00000557342 FSTP19883 344 aa10.28□□□□□ -0.76
SLIRP-209ENST00000557342 MAPK3P27361 379 aaPredicted RBP10.28□□□□□ -0.76
SLIRP-209ENST00000557342 BDKRB2P30411 391 aa10.28□□□□□ -0.76
SLIRP-209ENST00000557342 MTNR1BP49286 362 aa10.28□□□□□ -0.76
SLIRP-209ENST00000557342 ZP1P60852 638 aa10.28□□□□□ -0.76
SLIRP-209ENST00000557342 RPL31P62899 125 aaKnown RBP10.28□□□□□ -0.76
SLIRP-209ENST00000557342 GUCA2AQ02747 115 aa10.28□□□□□ -0.76
SLIRP-209ENST00000557342 IRF3Q14653 427 aa10.28□□□□□ -0.76
SLIRP-209ENST00000557342 MED22Q15528 200 aa10.28□□□□□ -0.76
SLIRP-209ENST00000557342 TUSC1Q2TAM9 212 aa10.28□□□□□ -0.76
SLIRP-209ENST00000557342 DDI2Q5TDH0 399 aa10.28□□□□□ -0.76
SLIRP-209ENST00000557342 CRIP3Q6Q6R5 217 aa10.28□□□□□ -0.76
SLIRP-209ENST00000557342 METAP1DQ6UB28 335 aaPredicted RBP10.28□□□□□ -0.76
SLIRP-209ENST00000557342 GDPD3Q7L5L3 318 aa10.28□□□□□ -0.76
SLIRP-209ENST00000557342 PRSS48Q7RTY5 328 aa10.28□□□□□ -0.76
SLIRP-209ENST00000557342 MS4A15Q8N5U1 240 aa10.28□□□□□ -0.76
SLIRP-209ENST00000557342 OR52N4Q8NGI2 321 aa10.28□□□□□ -0.76
SLIRP-209ENST00000557342 LHX4Q969G2 390 aa10.28□□□□□ -0.76
SLIRP-209ENST00000557342 EXOSC4Q9NPD3 245 aaKnown RBP10.28□□□□□ -0.76
SLIRP-209ENST00000557342 FOXJ3Q9UPW0 622 aa10.28□□□□□ -0.76
SLIRP-209ENST00000557342 TRBV5-7A0A0A0MS05 114 aa10.27□□□□□ -0.77
SLIRP-209ENST00000557342 IGHV1-69DA0A0B4J2H0 117 aa10.27□□□□□ -0.77
SLIRP-209ENST00000557342 hCG_1809904A0A1W2PP81 198 aa10.27□□□□□ -0.77
SLIRP-209ENST00000557342 A0A1W2PPE2 198 aa10.27□□□□□ -0.77
SLIRP-209ENST00000557342 A0A1W2PR64 198 aa10.27□□□□□ -0.77
SLIRP-209ENST00000557342 A0A1W2PRV1 198 aa10.27□□□□□ -0.77
SLIRP-209ENST00000557342 GABRPO00591 440 aa10.27□□□□□ -0.77
SLIRP-209ENST00000557342 ZNF737O75373 536 aa10.27□□□□□ -0.77
SLIRP-209ENST00000557342 RGS9O75916 674 aaPredicted RBP10.27□□□□□ -0.77
SLIRP-209ENST00000557342 IGHV1-69P01742 117 aa10.27□□□□□ -0.77
SLIRP-209ENST00000557342 IGFBP3P17936 291 aaPredicted RBP10.27□□□□□ -0.77
SLIRP-209ENST00000557342 ZNF93P35789 620 aaPredicted RBP10.27□□□□□ -0.77
SLIRP-209ENST00000557342 GPR50Q13585 617 aa10.27□□□□□ -0.77
SLIRP-209ENST00000557342 KRTAP24-1Q3LI83 254 aa10.27□□□□□ -0.77
SLIRP-209ENST00000557342 NCR3LG1Q68D85 454 aa10.27□□□□□ -0.77
SLIRP-209ENST00000557342 ELP2Q6IA86 826 aa10.27□□□□□ -0.77
SLIRP-209ENST00000557342 ASPHD2Q6ICH7 369 aa10.27□□□□□ -0.77
SLIRP-209ENST00000557342 BRD3OSQ6XYD6 125 aa10.27□□□□□ -0.77
SLIRP-209ENST00000557342 RNF144BQ7Z419 303 aa10.27□□□□□ -0.77
SLIRP-209ENST00000557342 BCL6BQ8N143 479 aaPredicted RBP10.27□□□□□ -0.77
SLIRP-209ENST00000557342 OR8H2Q8N162 312 aa10.27□□□□□ -0.77
SLIRP-209ENST00000557342 SIGLECL1Q8N7X8 197 aa10.27□□□□□ -0.77
SLIRP-209ENST00000557342 TNFAIP8L1Q8WVP5 186 aa10.27□□□□□ -0.77
SLIRP-209ENST00000557342 OR14A2Q96R54 314 aa10.27□□□□□ -0.77
SLIRP-209ENST00000557342 OR5M11Q96RB7 305 aa10.27□□□□□ -0.77
SLIRP-209ENST00000557342 S100A13Q99584 98 aa10.27□□□□□ -0.77
SLIRP-209ENST00000557342 CCDC90BQ9GZT6 254 aa10.27□□□□□ -0.77
SLIRP-209ENST00000557342 FAM192AQ9GZU8 254 aa10.27□□□□□ -0.77
SLIRP-209ENST00000557342 METTL8Q9H825 291 aaKnown RBP10.27□□□□□ -0.77
SLIRP-209ENST00000557342 ZMAT3Q9HA38 289 aaKnown RBP10.27□□□□□ -0.77
SLIRP-209ENST00000557342 ISYNA1Q9NPH2 558 aa10.27□□□□□ -0.77
SLIRP-209ENST00000557342 PCDHB16Q9NRJ7 776 aa10.27□□□□□ -0.77
SLIRP-209ENST00000557342 C19orf12Q9NSK7 152 aa10.27□□□□□ -0.77
SLIRP-209ENST00000557342 GSTK1Q9Y2Q3 226 aa10.27□□□□□ -0.77
SLIRP-209ENST00000557342 LSM2Q9Y333 95 aaKnown RBP10.27□□□□□ -0.77
SLIRP-209ENST00000557342 CALCBP10092 127 aa10.26□□□□□ -0.77
SLIRP-209ENST00000557342 GABRR1P24046 479 aa10.26□□□□□ -0.77
SLIRP-209ENST00000557342 PRTN3P24158 256 aa10.26□□□□□ -0.77
SLIRP-209ENST00000557342 EEF1B2P24534 225 aaKnown RBP10.26□□□□□ -0.77
SLIRP-209ENST00000557342 TGFBR2P37173 567 aa10.26□□□□□ -0.77
SLIRP-209ENST00000557342 PTGFRP43088 359 aa10.26□□□□□ -0.77
SLIRP-209ENST00000557342 SNU13P55769 128 aaKnown RBP10.26□□□□□ -0.77
SLIRP-209ENST00000557342 EDDM3BP56851 147 aa10.26□□□□□ -0.77
SLIRP-209ENST00000557342 SRSF2Q01130 221 aaKnown RBP10.26□□□□□ -0.77
SLIRP-209ENST00000557342 MEF2CQ06413 473 aaPredicted RBP10.26□□□□□ -0.77
SLIRP-209ENST00000557342 DOC2BQ14184 412 aa10.26□□□□□ -0.77
SLIRP-209ENST00000557342 RSU1Q15404 277 aa10.26□□□□□ -0.77
SLIRP-209ENST00000557342 GRK1Q15835 563 aa10.26□□□□□ -0.77
SLIRP-209ENST00000557342 TMEM200BQ69YZ2 307 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms