RNA–Protein interactions for RNA: ENST00000557320.5

PAPOLA-223, Transcript of poly(A) polymerase alpha, human

TSL 1 (best) BASIC

Gene PAPOLA, Length 3,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAPOLA-223	ENST00000557320	LCN15	Q6UWW0	184 aa		13.12	□□□□□ -0.31
PAPOLA-223	ENST00000557320	ORAOV1	Q8WV07	137 aa		13.12	□□□□□ -0.31
PAPOLA-223	ENST00000557320	EMG1	Q92979	244 aa	Known RBP	13.12	□□□□□ -0.31
PAPOLA-223	ENST00000557320	NICN1	Q9BSH3	213 aa		13.12	□□□□□ -0.31
PAPOLA-223	ENST00000557320	PELI2	Q9HAT8	420 aa		13.12	□□□□□ -0.31
PAPOLA-223	ENST00000557320	THAP10	Q9P2Z0	257 aa	Predicted RBP	13.12	□□□□□ -0.31
PAPOLA-223	ENST00000557320	B3GALT1	Q9Y5Z6	326 aa		13.12	□□□□□ -0.31
PAPOLA-223	ENST00000557320	TTC28	Q96AY4	2481 aa		13.12	□□□□□ -0.31
PAPOLA-223	ENST00000557320	HBE1	P02100	147 aa		13.12	□□□□□ -0.31
PAPOLA-223	ENST00000557320	MRPS34	P82930	218 aa	Known RBP	13.12	□□□□□ -0.31
PAPOLA-223	ENST00000557320	C1QL3	Q5VWW1	255 aa		13.12	□□□□□ -0.31
PAPOLA-223	ENST00000557320	CDC20B	Q86Y33	519 aa		13.12	□□□□□ -0.31
PAPOLA-223	ENST00000557320	TMEM170A	Q8WVE7	144 aa		13.12	□□□□□ -0.31
PAPOLA-223	ENST00000557320	BTF3L4	Q96K17	158 aa		13.12	□□□□□ -0.31
PAPOLA-223	ENST00000557320	OR8B4	Q96RC9	309 aa		13.12	□□□□□ -0.31
PAPOLA-223	ENST00000557320	SMIM7	Q9BQ49	75 aa		13.12	□□□□□ -0.31
PAPOLA-223	ENST00000557320	C20orf144	Q9BQM9	153 aa		13.12	□□□□□ -0.31
PAPOLA-223	ENST00000557320	BANF2	Q9H503	90 aa		13.12	□□□□□ -0.31
PAPOLA-223	ENST00000557320	ZNF701	Q9NV72	531 aa	Predicted RBP	13.12	□□□□□ -0.31
PAPOLA-223	ENST00000557320	OSGIN2	Q9Y236	505 aa		13.12	□□□□□ -0.31
PAPOLA-223	ENST00000557320	WIPF3	A6NGB9	483 aa		13.12	□□□□□ -0.31
PAPOLA-223	ENST00000557320	ARPC3	O15145	178 aa		13.12	□□□□□ -0.31
PAPOLA-223	ENST00000557320	PTGER4	P35408	488 aa		13.12	□□□□□ -0.31
PAPOLA-223	ENST00000557320	REEP5	Q00765	189 aa		13.12	□□□□□ -0.31
PAPOLA-223	ENST00000557320	ALG10	Q5BKT4	473 aa		13.12	□□□□□ -0.31
PAPOLA-223	ENST00000557320	ASPHD2	Q6ICH7	369 aa		13.12	□□□□□ -0.31
PAPOLA-223	ENST00000557320	OR13G1	Q8NGZ3	307 aa		13.12	□□□□□ -0.31
PAPOLA-223	ENST00000557320	RBMXL1	Q96E39	390 aa	Known RBP	13.12	□□□□□ -0.31
PAPOLA-223	ENST00000557320	MAP1LC3B2	A6NCE7	125 aa		13.11	□□□□□ -0.31
PAPOLA-223	ENST00000557320	FAM24A	A6NFZ4	105 aa		13.11	□□□□□ -0.31
PAPOLA-223	ENST00000557320	ST8SIA3	O43173	380 aa		13.11	□□□□□ -0.31
PAPOLA-223	ENST00000557320	CD46	P15529	392 aa		13.11	□□□□□ -0.31
PAPOLA-223	ENST00000557320	DTYMK	P23919	212 aa		13.11	□□□□□ -0.31
PAPOLA-223	ENST00000557320	FAM3B	P58499	235 aa	Predicted RBP	13.11	□□□□□ -0.31
PAPOLA-223	ENST00000557320	RUNX1	Q01196	453 aa		13.11	□□□□□ -0.31
PAPOLA-223	ENST00000557320	SLC17A1	Q14916	467 aa		13.11	□□□□□ -0.31
PAPOLA-223	ENST00000557320		Q6ZS52	159 aa		13.11	□□□□□ -0.31
PAPOLA-223	ENST00000557320	SYT13	Q7L8C5	426 aa		13.11	□□□□□ -0.31
PAPOLA-223	ENST00000557320	SUMF1	Q8NBK3	374 aa		13.11	□□□□□ -0.31
PAPOLA-223	ENST00000557320	PTPMT1	Q8WUK0	201 aa	Predicted RBP	13.11	□□□□□ -0.31
PAPOLA-223	ENST00000557320	ZNF764	Q96H86	408 aa	Predicted RBP	13.11	□□□□□ -0.31
PAPOLA-223	ENST00000557320	SAMD10	Q9BYL1	202 aa		13.11	□□□□□ -0.31
PAPOLA-223	ENST00000557320	MAP1LC3B	Q9GZQ8	125 aa		13.11	□□□□□ -0.31
PAPOLA-223	ENST00000557320	CTDSP1	Q9GZU7	261 aa		13.11	□□□□□ -0.31
PAPOLA-223	ENST00000557320	PLSCR2	Q9NRY7	297 aa		13.11	□□□□□ -0.31
PAPOLA-223	ENST00000557320	IL19	Q9UHD0	177 aa		13.11	□□□□□ -0.31
PAPOLA-223	ENST00000557320	MMP17	Q9ULZ9	603 aa		13.11	□□□□□ -0.31
PAPOLA-223	ENST00000557320	EMC9	Q9Y3B6	208 aa		13.11	□□□□□ -0.31
PAPOLA-223	ENST00000557320	CLEC3A	O75596	197 aa		13.11	□□□□□ -0.31
PAPOLA-223	ENST00000557320	UBE2G2	P60604	165 aa		13.11	□□□□□ -0.31
PAPOLA-223	ENST00000557320	FBLN7	Q53RD9	439 aa		13.11	□□□□□ -0.31
PAPOLA-223	ENST00000557320	TMEM108	Q6UXF1	575 aa		13.11	□□□□□ -0.31
PAPOLA-223	ENST00000557320	PCBD2	Q9H0N5	130 aa		13.11	□□□□□ -0.31
PAPOLA-223	ENST00000557320	RBKS	Q9H477	322 aa		13.11	□□□□□ -0.31
PAPOLA-223	ENST00000557320	GPR35	Q9HC97	309 aa		13.11	□□□□□ -0.31
PAPOLA-223	ENST00000557320	TMEM242	Q9NWH2	141 aa		13.11	□□□□□ -0.31
PAPOLA-223	ENST00000557320	MPDZ	O75970	2070 aa		13.11	□□□□□ -0.31
PAPOLA-223	ENST00000557320	HOXC12	P31275	282 aa		13.1	□□□□□ -0.31
PAPOLA-223	ENST00000557320	GPR1	P46091	355 aa		13.1	□□□□□ -0.31
PAPOLA-223	ENST00000557320	SNU13	P55769	128 aa	Known RBP	13.1	□□□□□ -0.31
PAPOLA-223	ENST00000557320	RAB38	P57729	211 aa		13.1	□□□□□ -0.31
PAPOLA-223	ENST00000557320	ZNF596	Q8TC21	504 aa		13.1	□□□□□ -0.31
PAPOLA-223	ENST00000557320	MOB3A	Q96BX8	217 aa		13.1	□□□□□ -0.31
PAPOLA-223	ENST00000557320	TBL1XR1	Q9BZK7	514 aa		13.1	□□□□□ -0.31
PAPOLA-223	ENST00000557320	GPR89A	B7ZAQ6	455 aa		13.1	□□□□□ -0.31
PAPOLA-223	ENST00000557320	GALR2	O43603	387 aa	Predicted RBP	13.1	□□□□□ -0.31
PAPOLA-223	ENST00000557320	GPR89B	P0CG08	455 aa		13.1	□□□□□ -0.31
PAPOLA-223	ENST00000557320	SFTPD	P35247	375 aa		13.1	□□□□□ -0.31
PAPOLA-223	ENST00000557320	CSNK1A1	P48729	337 aa		13.1	□□□□□ -0.31
PAPOLA-223	ENST00000557320	CSNK1G2	P78368	415 aa		13.1	□□□□□ -0.31
PAPOLA-223	ENST00000557320	FHL1	Q13642	323 aa		13.1	□□□□□ -0.31
PAPOLA-223	ENST00000557320	ABCA11P	Q4W5N1	156 aa		13.1	□□□□□ -0.31
PAPOLA-223	ENST00000557320	CLDND2	Q8NHS1	167 aa		13.1	□□□□□ -0.31
PAPOLA-223	ENST00000557320	CMTM2	Q8TAZ6	248 aa		13.1	□□□□□ -0.31
PAPOLA-223	ENST00000557320	RPUSD4	Q96CM3	377 aa	Known RBP	13.1	□□□□□ -0.31
PAPOLA-223	ENST00000557320	CLUHP3	Q96NS8	147 aa		13.1	□□□□□ -0.31
PAPOLA-223	ENST00000557320	HSPB9	Q9BQS6	159 aa		13.1	□□□□□ -0.31
PAPOLA-223	ENST00000557320	LAMTOR2	Q9Y2Q5	125 aa		13.1	□□□□□ -0.31
PAPOLA-223	ENST00000557320	ZNF318	Q5VUA4	2279 aa		13.1	□□□□□ -0.31
PAPOLA-223	ENST00000557320	RTTN	Q86VV8	2226 aa		13.1	□□□□□ -0.31
PAPOLA-223	ENST00000557320	LMX1B	O60663	402 aa		13.1	□□□□□ -0.31
PAPOLA-223	ENST00000557320	HPN	P05981	417 aa		13.1	□□□□□ -0.31
PAPOLA-223	ENST00000557320	BMI1	P35226	326 aa		13.1	□□□□□ -0.31
PAPOLA-223	ENST00000557320	ABHD17C	Q6PCB6	329 aa		13.1	□□□□□ -0.31
PAPOLA-223	ENST00000557320	OR2T10	Q8NGZ9	312 aa		13.1	□□□□□ -0.31
PAPOLA-223	ENST00000557320	SDF2L1	Q9HCN8	221 aa		13.1	□□□□□ -0.31
PAPOLA-223	ENST00000557320	SLC2A9	Q9NRM0	540 aa		13.1	□□□□□ -0.31
PAPOLA-223	ENST00000557320	TMEM106B	Q9NUM4	274 aa		13.1	□□□□□ -0.31
PAPOLA-223	ENST00000557320	APOBEC3B	Q9UH17	382 aa	Known RBP	13.1	□□□□□ -0.31
PAPOLA-223	ENST00000557320	LOC105371242	A0A075B767	164 aa		13.09	□□□□□ -0.31
PAPOLA-223	ENST00000557320	LOC107986453	A0A1B0GWG9	222 aa		13.09	□□□□□ -0.31
PAPOLA-223	ENST00000557320	LDB3	O75112	727 aa		13.09	□□□□□ -0.31
PAPOLA-223	ENST00000557320	CST7	O76096	145 aa		13.09	□□□□□ -0.31
PAPOLA-223	ENST00000557320	ATXN8OS	P0DMR3	200 aa		13.09	□□□□□ -0.31
PAPOLA-223	ENST00000557320	VSIG8	P0DPA2	414 aa		13.09	□□□□□ -0.31
PAPOLA-223	ENST00000557320	RIPPLY3	P57055	190 aa		13.09	□□□□□ -0.31
PAPOLA-223	ENST00000557320	PCK2	Q16822	640 aa		13.09	□□□□□ -0.31
PAPOLA-223	ENST00000557320	KCTD18	Q6PI47	426 aa	Predicted RBP	13.09	□□□□□ -0.31
PAPOLA-223	ENST00000557320	COMMD2	Q86X83	199 aa		13.09	□□□□□ -0.31
PAPOLA-223	ENST00000557320	LGI3	Q8N145	548 aa		13.09	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms