RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 SEMA5BQ9P283 1151 aa9.89□□□□□ -0.83
SRP54-213ENST00000556994 IGKV1-12A0A0C4DH73 117 aa9.89□□□□□ -0.83
SRP54-213ENST00000556994 NPIPA2E9PIF3 369 aa9.89□□□□□ -0.83
SRP54-213ENST00000556994 NPIPA3F8WFD2 350 aa9.89□□□□□ -0.83
SRP54-213ENST00000556994 AP4M1O00189 453 aa9.89□□□□□ -0.83
SRP54-213ENST00000556994 DHHO43323 396 aa9.89□□□□□ -0.83
SRP54-213ENST00000556994 OR2C1O95371 312 aa9.89□□□□□ -0.83
SRP54-213ENST00000556994 IGKV1D-12P01611 117 aa9.89□□□□□ -0.83
SRP54-213ENST00000556994 CHATP28329 748 aa9.89□□□□□ -0.83
SRP54-213ENST00000556994 RPS23P62266 143 aaKnown RBP9.89□□□□□ -0.83
SRP54-213ENST00000556994 SHBQ15464 509 aa9.89□□□□□ -0.83
SRP54-213ENST00000556994 GPR157Q5UAW9 335 aa9.89□□□□□ -0.83
SRP54-213ENST00000556994 CARFQ8N187 725 aa9.89□□□□□ -0.83
SRP54-213ENST00000556994 OR51M1Q9H341 326 aa9.89□□□□□ -0.83
SRP54-213ENST00000556994 MMP24Q9Y5R2 645 aa9.89□□□□□ -0.83
SRP54-213ENST00000556994 MTCH2Q9Y6C9 303 aa9.89□□□□□ -0.83
SRP54-213ENST00000556994 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.88□□□□□ -0.83
SRP54-213ENST00000556994 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.88□□□□□ -0.83
SRP54-213ENST00000556994 ATXN7O15265 892 aaPredicted RBP9.88□□□□□ -0.83
SRP54-213ENST00000556994 GDF9O60383 454 aa9.88□□□□□ -0.83
SRP54-213ENST00000556994 NXPH3O95157 252 aa9.88□□□□□ -0.83
SRP54-213ENST00000556994 FBP1P09467 338 aa9.88□□□□□ -0.83
SRP54-213ENST00000556994 OTX1P32242 354 aaPredicted RBP9.88□□□□□ -0.83
SRP54-213ENST00000556994 EIF2S3P41091 472 aaKnown RBP9.88□□□□□ -0.83
SRP54-213ENST00000556994 RPS10P46783 165 aaKnown RBP9.88□□□□□ -0.83
SRP54-213ENST00000556994 H3F3AP84243 136 aa9.88□□□□□ -0.83
SRP54-213ENST00000556994 EWSR1Q01844 656 aaKnown RBP eCLIP9.88□□□□□ -0.83
SRP54-213ENST00000556994 SOHLH1Q5JUK2 328 aa9.88□□□□□ -0.83
SRP54-213ENST00000556994 RAET1LQ5VY80 246 aa9.88□□□□□ -0.83
SRP54-213ENST00000556994 ZNF774Q6NX45 483 aa9.88□□□□□ -0.83
SRP54-213ENST00000556994 Q6ZPA2 131 aa9.88□□□□□ -0.83
SRP54-213ENST00000556994 RABEPKQ7Z6M1 372 aa9.88□□□□□ -0.83
SRP54-213ENST00000556994 FBXL14Q8N1E6 418 aa9.88□□□□□ -0.83
SRP54-213ENST00000556994 SUMF2Q8NBJ7 301 aa9.88□□□□□ -0.83
SRP54-213ENST00000556994 TCTEX1D2Q8WW35 142 aa9.88□□□□□ -0.83
SRP54-213ENST00000556994 TMEM54Q969K7 222 aa9.88□□□□□ -0.83
SRP54-213ENST00000556994 SPTSSAQ969W0 71 aa9.88□□□□□ -0.83
SRP54-213ENST00000556994 PBDC1Q9BVG4 233 aa9.88□□□□□ -0.83
SRP54-213ENST00000556994 SUCNR1Q9BXA5 334 aa9.88□□□□□ -0.83
SRP54-213ENST00000556994 ULBP2Q9BZM5 246 aa9.88□□□□□ -0.83
SRP54-213ENST00000556994 MAGT1Q9H0U3 335 aa9.88□□□□□ -0.83
SRP54-213ENST00000556994 CHCHD2Q9Y6H1 151 aaPredicted RBP9.88□□□□□ -0.83
SRP54-213ENST00000556994 NKX2-6A6NCS4 301 aa9.88□□□□□ -0.83
SRP54-213ENST00000556994 K7N7A8 449 aa9.88□□□□□ -0.83
SRP54-213ENST00000556994 LCATP04180 440 aa9.88□□□□□ -0.83
SRP54-213ENST00000556994 AADACP22760 399 aa9.88□□□□□ -0.83
SRP54-213ENST00000556994 PMELP40967 661 aa9.88□□□□□ -0.83
SRP54-213ENST00000556994 SUCLG1P53597 346 aaKnown RBP9.88□□□□□ -0.83
SRP54-213ENST00000556994 IL13RA2Q14627 380 aa9.88□□□□□ -0.83
SRP54-213ENST00000556994 RHEBQ15382 184 aa9.88□□□□□ -0.83
SRP54-213ENST00000556994 HAGHQ16775 308 aa9.88□□□□□ -0.83
SRP54-213ENST00000556994 C10orf128Q5T292 105 aa9.88□□□□□ -0.83
SRP54-213ENST00000556994 ZNF343Q6P1L6 599 aa9.88□□□□□ -0.83
SRP54-213ENST00000556994 WDR74Q6RFH5 385 aaPredicted RBP9.88□□□□□ -0.83
SRP54-213ENST00000556994 LGI3Q8N145 548 aa9.88□□□□□ -0.83
SRP54-213ENST00000556994 FADS6Q8N9I5 356 aa9.88□□□□□ -0.83
SRP54-213ENST00000556994 OR2G3Q8NGZ4 309 aa9.88□□□□□ -0.83
SRP54-213ENST00000556994 BORCS8Q96FH0 119 aa9.88□□□□□ -0.83
SRP54-213ENST00000556994 ST3GAL6Q9Y274 331 aa9.88□□□□□ -0.83
SRP54-213ENST00000556994 STRAPQ9Y3F4 350 aaKnown RBP9.88□□□□□ -0.83
SRP54-213ENST00000556994 ADAMTS20P59510 1910 aa9.88□□□□□ -0.83
SRP54-213ENST00000556994 LOC102725191A0A1B0GVB3 256 aa9.87□□□□□ -0.83
SRP54-213ENST00000556994 PPIHO43447 177 aaKnown RBP9.87□□□□□ -0.83
SRP54-213ENST00000556994 LMO1P25800 156 aa9.87□□□□□ -0.83
SRP54-213ENST00000556994 ATP6V0CP27449 155 aa9.87□□□□□ -0.83
SRP54-213ENST00000556994 HIST1H3AP68431 136 aa9.87□□□□□ -0.83
SRP54-213ENST00000556994 EIF3IQ13347 325 aaKnown RBP9.87□□□□□ -0.83
SRP54-213ENST00000556994 GNMTQ14749 295 aa9.87□□□□□ -0.83
SRP54-213ENST00000556994 HIST2H3PS2Q5TEC6 136 aa9.87□□□□□ -0.83
SRP54-213ENST00000556994 HIST2H3AQ71DI3 136 aa9.87□□□□□ -0.83
SRP54-213ENST00000556994 KMT5CQ86Y97 462 aa9.87□□□□□ -0.83
SRP54-213ENST00000556994 SLC39A7Q92504 469 aa9.87□□□□□ -0.83
SRP54-213ENST00000556994 MR1Q95460 341 aa9.87□□□□□ -0.83
SRP54-213ENST00000556994 BOD1Q96IK1 185 aa9.87□□□□□ -0.83
SRP54-213ENST00000556994 TINAGQ9UJW2 476 aa9.87□□□□□ -0.83
SRP54-213ENST00000556994 HSF4Q9ULV5 492 aa9.87□□□□□ -0.83
SRP54-213ENST00000556994 URGCP-MRPS24S4R325 110 aa9.87□□□□□ -0.83
SRP54-213ENST00000556994 IGSF23A1L1A6 192 aa9.87□□□□□ -0.83
SRP54-213ENST00000556994 ZNF724A8MTY0 619 aa9.87□□□□□ -0.83
SRP54-213ENST00000556994 TNFSF11O14788 317 aa9.87□□□□□ -0.83
SRP54-213ENST00000556994 ZNHIT1O43257 154 aa9.87□□□□□ -0.83
SRP54-213ENST00000556994 IGHV2-70P01814 119 aa9.87□□□□□ -0.83
SRP54-213ENST00000556994 DTYMKP23919 212 aa9.87□□□□□ -0.83
SRP54-213ENST00000556994 RBP2P50120 134 aa9.87□□□□□ -0.83
SRP54-213ENST00000556994 RAB5CP51148 216 aa9.87□□□□□ -0.83
SRP54-213ENST00000556994 TSC22D1Q15714 1073 aa9.87□□□□□ -0.83
SRP54-213ENST00000556994 LURAP1LQ8IV03 231 aa9.87□□□□□ -0.83
SRP54-213ENST00000556994 TMEM123Q8N131 208 aa9.87□□□□□ -0.83
SRP54-213ENST00000556994 OR2C3Q8N628 320 aa9.87□□□□□ -0.83
SRP54-213ENST00000556994 LINC00469Q8N7U9 141 aa9.87□□□□□ -0.83
SRP54-213ENST00000556994 LRTM2Q8N967 370 aa9.87□□□□□ -0.83
SRP54-213ENST00000556994 ZIC4Q8N9L1 334 aa9.87□□□□□ -0.83
SRP54-213ENST00000556994 KDF1Q8NAX2 398 aaPredicted RBP9.87□□□□□ -0.83
SRP54-213ENST00000556994 OR4D5Q8NGN0 318 aa9.87□□□□□ -0.83
SRP54-213ENST00000556994 SYT3Q9BQG1 590 aa9.87□□□□□ -0.83
SRP54-213ENST00000556994 TCEAL7Q9BRU2 100 aa9.87□□□□□ -0.83
SRP54-213ENST00000556994 ZNF700Q9H0M5 742 aa9.87□□□□□ -0.83
SRP54-213ENST00000556994 P4HTMQ9NXG6 502 aa9.87□□□□□ -0.83
SRP54-213ENST00000556994 RBFOX3A6NFN3 312 aa9.86□□□□□ -0.83
SRP54-213ENST00000556994 SSSCA1O60232 199 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms