RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 A0A1W2PQ09 198 aa20.05■□□□□ 0.8
SIX4-203ENST00000556952 H3BUI4 141 aa20.05■□□□□ 0.8
SIX4-203ENST00000556952 GEMIN2O14893 280 aaKnown RBP20.05■□□□□ 0.8
SIX4-203ENST00000556952 MELTFP08582 738 aa20.05■□□□□ 0.8
SIX4-203ENST00000556952 PRKACAP17612 351 aa20.05■□□□□ 0.8
SIX4-203ENST00000556952 CFHR2P36980 270 aa20.05■□□□□ 0.8
SIX4-203ENST00000556952 TMEM50BP56557 158 aa20.05■□□□□ 0.8
SIX4-203ENST00000556952 SNRPD2P62316 118 aaKnown RBP20.05■□□□□ 0.8
SIX4-203ENST00000556952 IL13RA2Q14627 380 aa20.05■□□□□ 0.8
SIX4-203ENST00000556952 SWI5Q1ZZU3 235 aa20.05■□□□□ 0.8
SIX4-203ENST00000556952 MPV17LQ2QL34 196 aa20.05■□□□□ 0.8
SIX4-203ENST00000556952 CDNFQ49AH0 187 aa20.05■□□□□ 0.8
SIX4-203ENST00000556952 PLAC9Q5JTB6 97 aa20.05■□□□□ 0.8
SIX4-203ENST00000556952 Q6ZTK2 550 aa20.05■□□□□ 0.8
SIX4-203ENST00000556952 BATF2Q8N1L9 274 aa20.05■□□□□ 0.8
SIX4-203ENST00000556952 HES4Q9HCC6 221 aa20.05■□□□□ 0.8
SIX4-203ENST00000556952 UFSP2Q9NUQ7 469 aa20.05■□□□□ 0.8
SIX4-203ENST00000556952 FAIMQ9NVQ4 179 aa20.05■□□□□ 0.8
SIX4-203ENST00000556952 C1orf123Q9NWV4 160 aa20.05■□□□□ 0.8
SIX4-203ENST00000556952 HSF4Q9ULV5 492 aa20.05■□□□□ 0.8
SIX4-203ENST00000556952 MFNGO00587 321 aa20.04■□□□□ 0.8
SIX4-203ENST00000556952 TNFRSF1AP19438 455 aa20.04■□□□□ 0.8
SIX4-203ENST00000556952 PCGF3Q3KNV8 242 aa20.04■□□□□ 0.8
SIX4-203ENST00000556952 FIP1L1Q6UN15 594 aaKnown RBP20.04■□□□□ 0.8
SIX4-203ENST00000556952 C19orf18Q8NEA5 215 aa20.04■□□□□ 0.8
SIX4-203ENST00000556952 GCDHQ92947 438 aaPredicted RBP20.04■□□□□ 0.8
SIX4-203ENST00000556952 ARHGAP5-AS1Q96IT6 56 aa20.04■□□□□ 0.8
SIX4-203ENST00000556952 PDZD2O15018 2839 aa20.04■□□□□ 0.8
SIX4-203ENST00000556952 hCG_1807616A0A1W2PRN6 198 aa20.04■□□□□ 0.8
SIX4-203ENST00000556952 TMEM235A6NFC5 223 aa20.04■□□□□ 0.8
SIX4-203ENST00000556952 HS3ST1O14792 307 aa20.04■□□□□ 0.8
SIX4-203ENST00000556952 TPD52L2O43399 206 aaKnown RBP20.04■□□□□ 0.8
SIX4-203ENST00000556952 NXPH2O95156 264 aa20.04■□□□□ 0.8
SIX4-203ENST00000556952 PTHLHP12272 177 aa20.04■□□□□ 0.8
SIX4-203ENST00000556952 GNB3P16520 340 aa20.04■□□□□ 0.8
SIX4-203ENST00000556952 INPP1P49441 399 aa20.04■□□□□ 0.8
SIX4-203ENST00000556952 DEFA1P59665 94 aa20.04■□□□□ 0.8
SIX4-203ENST00000556952 DEFA3P59666 94 aa20.04■□□□□ 0.8
SIX4-203ENST00000556952 PNLIPRP3Q17RR3 467 aa20.04■□□□□ 0.8
SIX4-203ENST00000556952 ZNF826PQ6ZT77 177 aa20.04■□□□□ 0.8
SIX4-203ENST00000556952 OR52I2Q8NH67 350 aa20.04■□□□□ 0.8
SIX4-203ENST00000556952 SETD6Q8TBK2 473 aa20.04■□□□□ 0.8
SIX4-203ENST00000556952 EGLN1Q9GZT9 426 aa20.04■□□□□ 0.8
SIX4-203ENST00000556952 ZMAT3Q9HA38 289 aaKnown RBP20.04■□□□□ 0.8
SIX4-203ENST00000556952 RBMX2Q9Y388 322 aaKnown RBP20.04■□□□□ 0.8
SIX4-203ENST00000556952 SPG11Q96JI7 2443 aa20.03■□□□□ 0.8
SIX4-203ENST00000556952 SERPINE3A8MV23 424 aa20.03■□□□□ 0.8
SIX4-203ENST00000556952 LPLP06858 475 aa20.03■□□□□ 0.8
SIX4-203ENST00000556952 CD3GP09693 182 aa20.03■□□□□ 0.8
SIX4-203ENST00000556952 RNASE12Q5GAN4 147 aaKnown RBP20.03■□□□□ 0.8
SIX4-203ENST00000556952 SIGIRRQ6IA17 410 aa20.03■□□□□ 0.8
SIX4-203ENST00000556952 MOGAT3Q86VF5 341 aa20.03■□□□□ 0.8
SIX4-203ENST00000556952 GPX8Q8TED1 209 aa20.03■□□□□ 0.8
SIX4-203ENST00000556952 NEDD4LQ96PU5 975 aa20.03■□□□□ 0.8
SIX4-203ENST00000556952 PECRQ9BY49 303 aa20.03■□□□□ 0.8
SIX4-203ENST00000556952 CLEC4MQ9H2X3 399 aaPredicted RBP20.03■□□□□ 0.8
SIX4-203ENST00000556952 ROS1P08922 2347 aa20.03■□□□□ 0.8
SIX4-203ENST00000556952 MEIOCA2RUB1 952 aa20.02■□□□□ 0.8
SIX4-203ENST00000556952 PDCD6O75340 191 aa20.02■□□□□ 0.8
SIX4-203ENST00000556952 CA11O75493 328 aa20.02■□□□□ 0.8
SIX4-203ENST00000556952 OR7C1O76099 320 aaPredicted RBP20.02■□□□□ 0.8
SIX4-203ENST00000556952 CHATP28329 748 aa20.02■□□□□ 0.8
SIX4-203ENST00000556952 SSBP1Q04837 148 aaKnown RBP20.02■□□□□ 0.8
SIX4-203ENST00000556952 SPIN3Q5JUX0 258 aa20.02■□□□□ 0.8
SIX4-203ENST00000556952 Q8TCH9 128 aa20.02■□□□□ 0.8
SIX4-203ENST00000556952 ST8SIA4Q92187 359 aa20.02■□□□□ 0.8
SIX4-203ENST00000556952 GCM1Q9NP62 436 aa20.02■□□□□ 0.8
SIX4-203ENST00000556952 PLEKHJ1Q9NW61 149 aa20.02■□□□□ 0.8
SIX4-203ENST00000556952 RASL12Q9NYN1 266 aa20.02■□□□□ 0.8
SIX4-203ENST00000556952 ANKRD17O75179 2603 aaKnown RBP20.02■□□□□ 0.8
SIX4-203ENST00000556952 SRRM5B3KS81 715 aa20.01■□□□□ 0.79
SIX4-203ENST00000556952 LANCL1O43813 399 aa20.01■□□□□ 0.79
SIX4-203ENST00000556952 GDNFP39905 211 aa20.01■□□□□ 0.79
SIX4-203ENST00000556952 PPOXP50336 477 aa20.01■□□□□ 0.79
SIX4-203ENST00000556952 RGS21Q2M5E4 152 aa20.01■□□□□ 0.79
SIX4-203ENST00000556952 SPRNQ5BIV9 151 aa20.01■□□□□ 0.79
SIX4-203ENST00000556952 AGAP6Q5VW22 663 aa20.01■□□□□ 0.79
SIX4-203ENST00000556952 LRRC29Q8WV35 223 aa20.01■□□□□ 0.79
SIX4-203ENST00000556952 SEH1LQ96EE3 360 aa20.01■□□□□ 0.79
SIX4-203ENST00000556952 IFT22Q9H7X7 185 aa20.01■□□□□ 0.79
SIX4-203ENST00000556952 SPACA1Q9HBV2 294 aa20.01■□□□□ 0.79
SIX4-203ENST00000556952 CBLN4Q9NTU7 201 aa20.01■□□□□ 0.79
SIX4-203ENST00000556952 DECR2Q9NUI1 292 aa20.01■□□□□ 0.79
SIX4-203ENST00000556952 IL36RNQ9UBH0 155 aa20.01■□□□□ 0.79
SIX4-203ENST00000556952 PLEKHA6Q9Y2H5 1048 aa20.01■□□□□ 0.79
SIX4-203ENST00000556952 KCNK7Q9Y2U2 307 aa20.01■□□□□ 0.79
SIX4-203ENST00000556952 TANC2Q9HCD6 1990 aa20.01■□□□□ 0.79
SIX4-203ENST00000556952 H7C417 338 aa20■□□□□ 0.79
SIX4-203ENST00000556952 FUT3P21217 361 aa20■□□□□ 0.79
SIX4-203ENST00000556952 GLRA1P23415 457 aa20■□□□□ 0.79
SIX4-203ENST00000556952 SNU13P55769 128 aaKnown RBP20■□□□□ 0.79
SIX4-203ENST00000556952 GNG2P59768 71 aa20■□□□□ 0.79
SIX4-203ENST00000556952 ACTBP60709 375 aa20■□□□□ 0.79
SIX4-203ENST00000556952 ACTG1P63261 375 aa20■□□□□ 0.79
SIX4-203ENST00000556952 ZNF146Q15072 292 aa20■□□□□ 0.79
SIX4-203ENST00000556952 SMIM21Q3B7S5 101 aa20■□□□□ 0.79
SIX4-203ENST00000556952 NKAPLQ5M9Q1 402 aa20■□□□□ 0.79
SIX4-203ENST00000556952 NRGNQ92686 78 aa20■□□□□ 0.79
SIX4-203ENST00000556952 SAP30LQ9HAJ7 183 aa20■□□□□ 0.79
SIX4-203ENST00000556952 RCC2Q9P258 522 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms