RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 POU2AF1Q16633 256 aa2.94□□□□□ -1.94
PRPF39-210ENST00000556718 PLET1Q6UQ28 207 aa2.94□□□□□ -1.94
PRPF39-210ENST00000556718 EPGNQ6UW88 154 aa2.94□□□□□ -1.94
PRPF39-210ENST00000556718 TEX261Q6UWH6 196 aa2.94□□□□□ -1.94
PRPF39-210ENST00000556718 C5orf46Q6UWT4 87 aa2.94□□□□□ -1.94
PRPF39-210ENST00000556718 LYPD2Q6UXB3 125 aa2.94□□□□□ -1.94
PRPF39-210ENST00000556718 WDR82Q6UXN9 313 aa2.94□□□□□ -1.94
PRPF39-210ENST00000556718 RASSF6Q6ZTQ3 369 aa2.94□□□□□ -1.94
PRPF39-210ENST00000556718 USP50Q70EL3 339 aaPredicted RBP2.94□□□□□ -1.94
PRPF39-210ENST00000556718 COMTD1Q86VU5 262 aa2.94□□□□□ -1.94
PRPF39-210ENST00000556718 CPNE9Q8IYJ1 553 aa2.94□□□□□ -1.94
PRPF39-210ENST00000556718 CYP4Z2PQ8N1L4 340 aa2.94□□□□□ -1.94
PRPF39-210ENST00000556718 STPG2Q8N412 459 aa2.94□□□□□ -1.94
PRPF39-210ENST00000556718 ATPAF2Q8N5M1 289 aa2.94□□□□□ -1.94
PRPF39-210ENST00000556718 ZFP41Q8N8Y5 198 aa2.94□□□□□ -1.94
PRPF39-210ENST00000556718 C19orf18Q8NEA5 215 aa2.94□□□□□ -1.94
PRPF39-210ENST00000556718 OR1M1Q8NGA1 313 aa2.94□□□□□ -1.94
PRPF39-210ENST00000556718 OR51L1Q8NGJ5 315 aa2.94□□□□□ -1.94
PRPF39-210ENST00000556718 OR13C9Q8NGT0 318 aa2.94□□□□□ -1.94
PRPF39-210ENST00000556718 OR51F2Q8NH61 342 aa2.94□□□□□ -1.94
PRPF39-210ENST00000556718 DYNC2LI1Q8TCX1 351 aa2.94□□□□□ -1.94
PRPF39-210ENST00000556718 TMEM158Q8WZ71 300 aa2.94□□□□□ -1.94
PRPF39-210ENST00000556718 SLC7A6Q92536 515 aa2.94□□□□□ -1.94
PRPF39-210ENST00000556718 CPNE4Q96A23 557 aaPredicted RBP2.94□□□□□ -1.94
PRPF39-210ENST00000556718 FAM131CQ96AQ9 280 aa2.94□□□□□ -1.94
PRPF39-210ENST00000556718 RNF145Q96MT1 663 aa2.94□□□□□ -1.94
PRPF39-210ENST00000556718 FOPNLQ96NB1 174 aa2.94□□□□□ -1.94
PRPF39-210ENST00000556718 ZNF436Q9C0F3 470 aaPredicted RBP2.94□□□□□ -1.94
PRPF39-210ENST00000556718 OR2AG1Q9H205 316 aa2.94□□□□□ -1.94
PRPF39-210ENST00000556718 C11orf49Q9H6J7 331 aa2.94□□□□□ -1.94
PRPF39-210ENST00000556718 PATZ1Q9HBE1 687 aaKnown RBP2.94□□□□□ -1.94
PRPF39-210ENST00000556718 MED9Q9NWA0 146 aa2.94□□□□□ -1.94
PRPF39-210ENST00000556718 CMTM6Q9NX76 183 aa2.94□□□□□ -1.94
PRPF39-210ENST00000556718 COPZ2Q9P299 210 aa2.94□□□□□ -1.94
PRPF39-210ENST00000556718 OR12D3Q9UGF7 316 aa2.94□□□□□ -1.94
PRPF39-210ENST00000556718 CD300AQ9UGN4 299 aa2.94□□□□□ -1.94
PRPF39-210ENST00000556718 HSPB11Q9Y547 144 aa2.94□□□□□ -1.94
PRPF39-210ENST00000556718 KPTNQ9Y664 436 aa2.94□□□□□ -1.94
PRPF39-210ENST00000556718 HSPE1-MOB4S4R3N1 261 aa2.94□□□□□ -1.94
PRPF39-210ENST00000556718 U3KQ87 197 aa2.94□□□□□ -1.94
PRPF39-210ENST00000556718 N4BP2Q86UW6 1770 aaPredicted RBP2.94□□□□□ -1.94
PRPF39-210ENST00000556718 NRCAMQ92823 1304 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 SLIT1O75093 1534 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 PREX2Q70Z35 1606 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 A2ML1A8K2U0 1454 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 FLT4P35916 1363 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 ROBO3Q96MS0 1386 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 IGHV3-74A0A0B4J1X5 117 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 RAB19A4D1S5 217 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 FAM166BA8MTA8 275 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 ZNF879B4DU55 563 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 H0Y9J4 135 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 SULT1C2O00338 296 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 NME4O00746 187 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 GNGT2O14610 69 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 MYL12BO14950 172 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 SGCEO43556 437 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 SLC19A2O60779 497 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 SS18L1O75177 396 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-210ENST00000556718 PROSCO94903 275 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 KCNK2O95069 426 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 NELFEP18615 380 aaKnown RBP2.93□□□□□ -1.94
PRPF39-210ENST00000556718 MYL12AP19105 171 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 CRHBPP24387 322 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 HOXA9P31269 272 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 RPL22P35268 128 aaKnown RBP2.93□□□□□ -1.94
PRPF39-210ENST00000556718 SPAM1P38567 509 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 ETV6P41212 452 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 RPL14P50914 215 aaKnown RBP2.93□□□□□ -1.94
PRPF39-210ENST00000556718 MYL6P60660 151 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 SNAP25P60880 206 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 CXCR4P61073 352 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 SNRPFP62306 86 aaKnown RBP2.93□□□□□ -1.94
PRPF39-210ENST00000556718 UBE2IP63279 158 aaKnown RBP2.93□□□□□ -1.94
PRPF39-210ENST00000556718 IFITM3Q01628 133 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 SMCO1Q147U7 214 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 CDNFQ49AH0 187 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 FBXO48Q5FWF7 155 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 CDKL4Q5MAI5 379 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 CYB5R2Q6BCY4 276 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 FAM45BPQ6NSW5 357 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 ARL9Q6T311 187 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 SLC35D2Q76EJ3 337 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 COPS6Q7L5N1 327 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 C12orf45Q8N5I9 185 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-210ENST00000556718 EIF4E3Q8N5X7 224 aaKnown RBP2.93□□□□□ -1.94
PRPF39-210ENST00000556718 MDS2Q8NDY4 140 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 FAM45AQ8TCE6 357 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 ZNF431Q8TF32 576 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-210ENST00000556718 RCN3Q96D15 328 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 C19orf60Q96EN9 201 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 RNF185Q96GF1 192 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 Q96MT0 163 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 MBOAT7Q96N66 472 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 ERMAPQ96PL5 475 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-210ENST00000556718 KLF6Q99612 283 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-210ENST00000556718 SEC22CQ9BRL7 303 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 GINS4Q9BRT9 223 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 TMEM175Q9BSA9 504 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 UGT2B28Q9BY64 529 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms