RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 PANO1I0J062 215 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 M0R036 132 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 OR10H3O60404 316 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 VAPBO95292 243 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 BRI3O95415 125 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 H6PDO95479 791 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 IFNA10P01566 189 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 STATHP02808 62 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 KLK3P07288 261 aaPredicted RBP3.22□□□□□ -1.89
PRPF39-209ENST00000556353 OCM2P0CE71 109 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 UBCP0CG48 685 aaKnown RBP3.22□□□□□ -1.89
PRPF39-209ENST00000556353 ERGP11308 486 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 SCGB1A1P11684 91 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 COX6A1P12074 109 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 CXCR2P25025 360 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 GTF2E2P29084 291 aaKnown RBP3.22□□□□□ -1.89
PRPF39-209ENST00000556353 SHMT2P34897 504 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 CEACAM6P40199 344 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 NSG1P42857 185 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 XCR1P46094 333 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 OR1D4P47884 311 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 MRPL19P49406 292 aaKnown RBP3.22□□□□□ -1.89
PRPF39-209ENST00000556353 CYB561P49447 251 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 RPL14P50914 215 aaKnown RBP3.22□□□□□ -1.89
PRPF39-209ENST00000556353 CLDN18P56856 261 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 ERVK-25P63136 954 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 DEFA6Q01524 100 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 FGL1Q08830 312 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 STX4Q12846 297 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 IL18R1Q13478 541 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 SERTAD2Q14140 314 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 SELPLGQ14242 412 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 ITIH4Q14624 930 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 PTGES3Q15185 160 aaKnown RBP3.22□□□□□ -1.89
PRPF39-209ENST00000556353 KCNJ8Q15842 424 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 HAGHQ16775 308 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 TMEM249Q2WGJ8 235 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 SLC36A2Q495M3 483 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 TNFAIP8L3Q5GJ75 292 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 C9orf135Q5VTT2 229 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 MEDAGQ5VYS4 303 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 OR52E8Q6IFG1 317 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 REEP3Q6NUK4 255 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 TMEM107Q6UX40 140 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 CYHR1Q6ZMK1 362 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 SLC16A14Q7RTX9 510 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 C16orf62Q7Z3J2 963 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 GABRG1Q8N1C3 465 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 MTURNQ8N3F0 131 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 STX19Q8N4C7 294 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 OR11G2Q8NGC1 345 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 OR51D1Q8NGF3 324 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 OR51A7Q8NH64 312 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 MAGEE2Q8TD90 523 aaPredicted RBP3.22□□□□□ -1.89
PRPF39-209ENST00000556353 UBTD2Q8WUN7 234 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 TMEM239Q8WW34 195 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 PSMF1Q92530 271 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 NRGNQ92686 78 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 C8orf44Q96CB5 159 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 DCUN1D1Q96GG9 259 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 C16orf74Q96GX8 76 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 BIRC8Q96P09 236 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 TSSK3Q96PN8 268 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 PPP1R2P1Q96PQ5 205 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 NAPGQ99747 312 aaPredicted RBP3.22□□□□□ -1.89
PRPF39-209ENST00000556353 NMUR2Q9GZQ4 415 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 PCBD2Q9H0N5 130 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 PLGRKTQ9HBL7 147 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 HRASLSQ9HDD0 168 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 LYARQ9NX58 379 aaKnown RBP3.22□□□□□ -1.89
PRPF39-209ENST00000556353 GALPQ9UBC7 116 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 OPN4Q9UHM6 478 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 GLS2Q9UI32 602 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 OR52A1Q9UKL2 312 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 GUCA1BQ9UMX6 200 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 ASF1AQ9Y294 204 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 L3MBTL1Q9Y468 752 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 OR10H1Q9Y4A9 318 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 ATG4BQ9Y4P1 393 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 HEBP2Q9Y5Z4 205 aa3.22□□□□□ -1.89
PRPF39-209ENST00000556353 NUP214P35658 2090 aaPredicted RBP3.21□□□□□ -1.89
PRPF39-209ENST00000556353 IGLV3-12A0A075B6K2 115 aa3.21□□□□□ -1.9
PRPF39-209ENST00000556353 TRBV11-1A0A0K0K1C0 115 aa3.21□□□□□ -1.9
PRPF39-209ENST00000556353 A0A1B0GV72 72 aa3.21□□□□□ -1.9
PRPF39-209ENST00000556353 SMIM31A0A1B0GVY4 71 aa3.21□□□□□ -1.9
PRPF39-209ENST00000556353 A0A1B0GX78 115 aa3.21□□□□□ -1.9
PRPF39-209ENST00000556353 A0A1W2PRG6 482 aa3.21□□□□□ -1.9
PRPF39-209ENST00000556353 SMCO3A2RU48 225 aa3.21□□□□□ -1.9
PRPF39-209ENST00000556353 ANKRD30BLA7E2S9 258 aa3.21□□□□□ -1.9
PRPF39-209ENST00000556353 EVPLLA8MZ36 301 aa3.21□□□□□ -1.9
PRPF39-209ENST00000556353 C9J4A7 227 aa3.21□□□□□ -1.9
PRPF39-209ENST00000556353 FOXE1O00358 373 aaPredicted RBP3.21□□□□□ -1.9
PRPF39-209ENST00000556353 CCRL2O00421 344 aa3.21□□□□□ -1.9
PRPF39-209ENST00000556353 GOSR2O14653 212 aa3.21□□□□□ -1.9
PRPF39-209ENST00000556353 RAB29O14966 203 aa3.21□□□□□ -1.9
PRPF39-209ENST00000556353 CCDC22O60826 627 aa3.21□□□□□ -1.9
PRPF39-209ENST00000556353 OR7A10O76100 309 aa3.21□□□□□ -1.9
PRPF39-209ENST00000556353 C1orf105O95561 183 aa3.21□□□□□ -1.9
PRPF39-209ENST00000556353 ANP32DO95626 131 aa3.21□□□□□ -1.9
PRPF39-209ENST00000556353 IFNA5P01569 189 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms