RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 SLC7A2P52569 658 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 OR12D2P58182 307 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 MTPNP58546 118 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 GMFBP60983 142 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 RPL31P62899 125 aaKnown RBP3.82□□□□□ -1.8
ATXN3-239ENST00000556315 CSNK2BP67870 215 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 SELPLGQ14242 412 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 TRAM2Q15035 370 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 RBMS2Q15434 407 aaKnown RBP3.82□□□□□ -1.8
ATXN3-239ENST00000556315 SNAI3Q3KNW1 292 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 AGKQ53H12 422 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 FAM76BQ5HYJ3 339 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 PIK3CD-AS1Q5SR53 167 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 METTL21CQ5VZV1 264 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 ZFAND6Q6FIF0 208 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 DRAM2Q6UX65 266 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 ZNF730Q6ZMV8 503 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 DPY19L2P2Q6ZN68 376 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 MBOAT2Q6ZWT7 520 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 RRM2BQ7LG56 351 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 C16orf82Q7Z2V1 217 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 CALHM1Q8IU99 346 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 LINC00346Q8IVM7 164 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 OR6V1Q8N148 313 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 NANOGP1Q8N7R0 232 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 ZNRF1Q8ND25 227 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 TMEM185AQ8NFB2 350 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 SLC26A10Q8NG04 563 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 OR11H6Q8NGC7 330 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 OR4C15Q8NGM1 316 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 OR13D1Q8NGV5 346 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 OR10A6Q8NH74 314 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 CAPSLQ8WWF8 208 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 SDSLQ96GA7 329 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 AKR1E2Q96JD6 320 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 PRRC1Q96M27 445 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 TSSK2Q96PF2 358 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 GPX7Q96SL4 187 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-239ENST00000556315 P2RX4Q99571 388 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 MICU1Q9BPX6 476 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 ZNF649Q9BS31 505 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 FNDC11Q9BVV2 318 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 AAMDCQ9H7C9 122 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 SPAG4Q9NPE6 437 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 VNN3Q9NY84 501 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 USE1Q9NZ43 259 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 NLKQ9UBE8 527 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 KCNG2Q9UJ96 466 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 IER3IP1Q9Y5U9 82 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 SMAD5-AS1Q9Y6J3 95 aa3.82□□□□□ -1.8
ATXN3-239ENST00000556315 COL7A1Q02388 2944 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 IGKV1D-17A0A075B6S4 117 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 A0A087WUU8 490 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 FAM90A7PA6NKC0 464 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 TMEM210A6NLX4 147 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 ANXA2P2A6NMY6 339 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 FAM90A12PA8MX19 464 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 FAM90A23PA8MXZ1 464 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 DCTN6O00399 190 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 SOCS2O14508 198 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 CDC42EP2O14613 210 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 ANGPT2O15123 496 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 AKR7A2O43488 359 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 RENP00797 406 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 TFF1P04155 84 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 ARG1P05089 322 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 PSG2P11465 335 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 GLRA1P23415 457 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 CFL1P23528 166 aaKnown RBP3.81□□□□□ -1.8
ATXN3-239ENST00000556315 OTX1P32242 354 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-239ENST00000556315 GPR4P46093 362 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 ENTPD1P49961 510 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 CAPZA1P52907 286 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 ACTR3P61158 418 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 RPL23AP62750 156 aaKnown RBP3.81□□□□□ -1.8
ATXN3-239ENST00000556315 SELENOWP63302 87 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 FAM3AP98173 230 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 DYNC1I2Q13409 638 aaKnown RBP3.81□□□□□ -1.8
ATXN3-239ENST00000556315 TAF13Q15543 124 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 CYBRD1Q53TN4 286 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 C9orf66Q5T8R8 295 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 MINOS1Q5TGZ0 78 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 ZNF770Q6IQ21 691 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-239ENST00000556315 TBPL2Q6SJ96 375 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 C10orf99Q6UWK7 81 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 SLC16A9Q7RTY1 509 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 DHDDSQ86SQ9 333 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 SBSPONQ8IVN8 264 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 OFCC1Q8IZS5 231 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 OSR2Q8N2R0 312 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 FTMTQ8N4E7 242 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 SETD9Q8NE22 299 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 CSNK2A3Q8NEV1 391 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 OR2T27Q8NH04 317 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 ZNF671Q8TAW3 534 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 RPL3LQ92901 407 aaKnown RBP3.81□□□□□ -1.8
ATXN3-239ENST00000556315 EME1Q96AY2 570 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 SGK3Q96BR1 496 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 CMTM5Q96DZ9 223 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 ZNF184Q99676 751 aaPredicted RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms