RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 PSORS1C1Q9UIG5 152 aa9.48□□□□□ -0.89
SLIRP-205ENST00000556310 SOX21Q9Y651 276 aaPredicted RBP9.48□□□□□ -0.89
SLIRP-205ENST00000556310 MDFIC2A0A1B0GVS7 189 aa9.47□□□□□ -0.89
SLIRP-205ENST00000556310 CLDN34H7C241 214 aa9.47□□□□□ -0.89
SLIRP-205ENST00000556310 K7N7A8 449 aa9.47□□□□□ -0.89
SLIRP-205ENST00000556310 OGG1O15527 345 aa9.47□□□□□ -0.89
SLIRP-205ENST00000556310 SPRY1O43609 319 aaPredicted RBP9.47□□□□□ -0.89
SLIRP-205ENST00000556310 ZNF737O75373 536 aa9.47□□□□□ -0.89
SLIRP-205ENST00000556310 LALBAP00709 142 aa9.47□□□□□ -0.89
SLIRP-205ENST00000556310 TK1P04183 234 aa9.47□□□□□ -0.89
SLIRP-205ENST00000556310 CD2P06729 351 aa9.47□□□□□ -0.89
SLIRP-205ENST00000556310 CHRM2P08172 466 aa9.47□□□□□ -0.89
SLIRP-205ENST00000556310 HCKP08631 526 aa9.47□□□□□ -0.89
SLIRP-205ENST00000556310 BCL3P20749 454 aa9.47□□□□□ -0.89
SLIRP-205ENST00000556310 PRTN3P24158 256 aa9.47□□□□□ -0.89
SLIRP-205ENST00000556310 TAS2R43P59537 309 aa9.47□□□□□ -0.89
SLIRP-205ENST00000556310 RPL31P62899 125 aaKnown RBP9.47□□□□□ -0.89
SLIRP-205ENST00000556310 COL10A1Q03692 680 aa9.47□□□□□ -0.89
SLIRP-205ENST00000556310 BAMBIQ13145 260 aa9.47□□□□□ -0.89
SLIRP-205ENST00000556310 BLMHQ13867 455 aa9.47□□□□□ -0.89
SLIRP-205ENST00000556310 DEFB112Q30KQ8 113 aa9.47□□□□□ -0.89
SLIRP-205ENST00000556310 SPIN3Q5JUX0 258 aa9.47□□□□□ -0.89
SLIRP-205ENST00000556310 NCR3LG1Q68D85 454 aa9.47□□□□□ -0.89
SLIRP-205ENST00000556310 ZNF529Q6P280 563 aa9.47□□□□□ -0.89
SLIRP-205ENST00000556310 SAXO1Q8IYX7 474 aa9.47□□□□□ -0.89
SLIRP-205ENST00000556310 FAM58AQ8N1B3 248 aa9.47□□□□□ -0.89
SLIRP-205ENST00000556310 STX19Q8N4C7 294 aa9.47□□□□□ -0.89
SLIRP-205ENST00000556310 ASCC1Q8N9N2 400 aaKnown RBP9.47□□□□□ -0.89
SLIRP-205ENST00000556310 ZNF485Q8NCK3 441 aa9.47□□□□□ -0.89
SLIRP-205ENST00000556310 BPIFB6Q8NFQ5 453 aa9.47□□□□□ -0.89
SLIRP-205ENST00000556310 RFT1Q96AA3 541 aa9.47□□□□□ -0.89
SLIRP-205ENST00000556310 CPNE2Q96FN4 548 aaPredicted RBP9.47□□□□□ -0.89
SLIRP-205ENST00000556310 SPACA5Q96QH8 159 aa9.47□□□□□ -0.89
SLIRP-205ENST00000556310 VCX3BQ9H321 246 aa9.47□□□□□ -0.89
SLIRP-205ENST00000556310 METTL8Q9H825 291 aaKnown RBP9.47□□□□□ -0.89
SLIRP-205ENST00000556310 NOX4Q9NPH5 578 aa9.47□□□□□ -0.89
SLIRP-205ENST00000556310 SIRT7Q9NRC8 400 aa9.47□□□□□ -0.89
SLIRP-205ENST00000556310 C19orf12Q9NSK7 152 aa9.47□□□□□ -0.89
SLIRP-205ENST00000556310 RBFOX1Q9NWB1 397 aaKnown RBP9.47□□□□□ -0.89
SLIRP-205ENST00000556310 FKBP14Q9NWM8 211 aa9.47□□□□□ -0.89
SLIRP-205ENST00000556310 ZNF281Q9Y2X9 895 aa9.47□□□□□ -0.89
SLIRP-205ENST00000556310 SIRT4Q9Y6E7 314 aaPredicted RBP9.47□□□□□ -0.89
SLIRP-205ENST00000556310 IGKV1-12A0A0C4DH73 117 aa9.46□□□□□ -0.9
SLIRP-205ENST00000556310 A0A1W2PPH5 198 aa9.46□□□□□ -0.9
SLIRP-205ENST00000556310 RNASEK-C17orf49H0YIS7 233 aa9.46□□□□□ -0.9
SLIRP-205ENST00000556310 MYL12BO14950 172 aa9.46□□□□□ -0.9
SLIRP-205ENST00000556310 KDM4BO94953 1096 aa9.46□□□□□ -0.9
SLIRP-205ENST00000556310 INMTO95050 263 aa9.46□□□□□ -0.9
SLIRP-205ENST00000556310 HAND1O96004 215 aa9.46□□□□□ -0.9
SLIRP-205ENST00000556310 IGKV1D-12P01611 117 aa9.46□□□□□ -0.9
SLIRP-205ENST00000556310 RNASE1P07998 156 aaKnown RBP9.46□□□□□ -0.9
SLIRP-205ENST00000556310 PRKACAP17612 351 aa9.46□□□□□ -0.9
SLIRP-205ENST00000556310 RAB3AP20336 220 aa9.46□□□□□ -0.9
SLIRP-205ENST00000556310 NPBWR2P48146 333 aa9.46□□□□□ -0.9
SLIRP-205ENST00000556310 SOX2P48431 317 aa9.46□□□□□ -0.9
SLIRP-205ENST00000556310 ZP1P60852 638 aa9.46□□□□□ -0.9
SLIRP-205ENST00000556310 ZNF146Q15072 292 aa9.46□□□□□ -0.9
SLIRP-205ENST00000556310 KISS1Q15726 138 aa9.46□□□□□ -0.9
SLIRP-205ENST00000556310 DMKNQ6E0U4 476 aaPredicted RBP9.46□□□□□ -0.9
SLIRP-205ENST00000556310 ASPHD2Q6ICH7 369 aa9.46□□□□□ -0.9
SLIRP-205ENST00000556310 CRIP3Q6Q6R5 217 aa9.46□□□□□ -0.9
SLIRP-205ENST00000556310 OR8H2Q8N162 312 aa9.46□□□□□ -0.9
SLIRP-205ENST00000556310 ZSCAN4Q8NAM6 433 aaPredicted RBP9.46□□□□□ -0.9
SLIRP-205ENST00000556310 OR5D18Q8NGL1 313 aa9.46□□□□□ -0.9
SLIRP-205ENST00000556310 OR5D13Q8NGL4 314 aa9.46□□□□□ -0.9
SLIRP-205ENST00000556310 TBC1D15Q8TC07 691 aa9.46□□□□□ -0.9
SLIRP-205ENST00000556310 TNFRSF14Q92956 283 aa9.46□□□□□ -0.9
SLIRP-205ENST00000556310 TMEM106AQ96A25 262 aa9.46□□□□□ -0.9
SLIRP-205ENST00000556310 DUX5Q96PT3 197 aa9.46□□□□□ -0.9
SLIRP-205ENST00000556310 RHOFQ9HBH0 211 aa9.46□□□□□ -0.9
SLIRP-205ENST00000556310 HMG20AQ9NP66 347 aa9.46□□□□□ -0.9
SLIRP-205ENST00000556310 TAS2R4Q9NYW5 299 aa9.46□□□□□ -0.9
SLIRP-205ENST00000556310 IL36RNQ9UBH0 155 aa9.46□□□□□ -0.9
SLIRP-205ENST00000556310 TRBV5-5A0A0J9YX44 114 aa9.45□□□□□ -0.9
SLIRP-205ENST00000556310 H0YHG0 523 aa9.45□□□□□ -0.9
SLIRP-205ENST00000556310 ANGPTL7O43827 346 aa9.45□□□□□ -0.9
SLIRP-205ENST00000556310 C21orf33P30042 268 aaPredicted RBP9.45□□□□□ -0.9
SLIRP-205ENST00000556310 WNT4P56705 351 aa9.45□□□□□ -0.9
SLIRP-205ENST00000556310 KLRD1Q13241 179 aa9.45□□□□□ -0.9
SLIRP-205ENST00000556310 SLC9A3R2Q15599 337 aa9.45□□□□□ -0.9
SLIRP-205ENST00000556310 YIF1BQ5BJH7 314 aa9.45□□□□□ -0.9
SLIRP-205ENST00000556310 C17orf107Q6ZR85 190 aa9.45□□□□□ -0.9
SLIRP-205ENST00000556310 RNF144BQ7Z419 303 aa9.45□□□□□ -0.9
SLIRP-205ENST00000556310 PDZD9Q8IXQ8 264 aa9.45□□□□□ -0.9
SLIRP-205ENST00000556310 TMEM86BQ8N661 226 aa9.45□□□□□ -0.9
SLIRP-205ENST00000556310 OR51A2Q8NGJ7 313 aa9.45□□□□□ -0.9
SLIRP-205ENST00000556310 GHSRQ92847 366 aa9.45□□□□□ -0.9
SLIRP-205ENST00000556310 SLC25A28Q96A46 364 aa9.45□□□□□ -0.9
SLIRP-205ENST00000556310 SNX22Q96L94 193 aa9.45□□□□□ -0.9
SLIRP-205ENST00000556310 PGLYRP3Q96LB9 341 aa9.45□□□□□ -0.9
SLIRP-205ENST00000556310 GLS2Q9UI32 602 aa9.45□□□□□ -0.9
SLIRP-205ENST00000556310 PCDHGB5Q9Y5G0 923 aa9.45□□□□□ -0.9
SLIRP-205ENST00000556310 A0A0U1RQK1 487 aa9.44□□□□□ -0.9
SLIRP-205ENST00000556310 TMEM82A0PJX8 343 aa9.44□□□□□ -0.9
SLIRP-205ENST00000556310 TMEM89A2RUT3 159 aa9.44□□□□□ -0.9
SLIRP-205ENST00000556310 NPFFO15130 113 aa9.44□□□□□ -0.9
SLIRP-205ENST00000556310 MAGEB3O15480 346 aa9.44□□□□□ -0.9
SLIRP-205ENST00000556310 HOXA3O43365 443 aaPredicted RBP9.44□□□□□ -0.9
SLIRP-205ENST00000556310 CDK1P06493 297 aa9.44□□□□□ -0.9
SLIRP-205ENST00000556310 MELTFP08582 738 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms