RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 K7N7A8 449 aa12.49□□□□□ -0.41
ACTN1-217ENST00000556203 IGHV1-69P01742 117 aa12.49□□□□□ -0.41
ACTN1-217ENST00000556203 TMEM225BP0DP42 221 aa12.49□□□□□ -0.41
ACTN1-217ENST00000556203 PRKACAP17612 351 aa12.49□□□□□ -0.41
ACTN1-217ENST00000556203 DUSP1P28562 367 aa12.49□□□□□ -0.41
ACTN1-217ENST00000556203 DLX1P56177 255 aa12.49□□□□□ -0.41
ACTN1-217ENST00000556203 BPIFB3P59826 476 aa12.49□□□□□ -0.41
ACTN1-217ENST00000556203 ZP1P60852 638 aa12.49□□□□□ -0.41
ACTN1-217ENST00000556203 RPS11P62280 158 aaKnown RBP eCLIP12.49□□□□□ -0.41
ACTN1-217ENST00000556203 RPL31P62899 125 aaKnown RBP12.49□□□□□ -0.41
ACTN1-217ENST00000556203 PPP3R1P63098 170 aa12.49□□□□□ -0.41
ACTN1-217ENST00000556203 PRB3Q04118 309 aaPredicted RBP12.49□□□□□ -0.41
ACTN1-217ENST00000556203 RNLSQ5VYX0 342 aa12.49□□□□□ -0.41
ACTN1-217ENST00000556203 SATL1Q86VE3 508 aa12.49□□□□□ -0.41
ACTN1-217ENST00000556203 SAXO1Q8IYX7 474 aa12.49□□□□□ -0.41
ACTN1-217ENST00000556203 Q8N7P7 452 aa12.49□□□□□ -0.41
ACTN1-217ENST00000556203 ZDHHC22Q8N966 263 aa12.49□□□□□ -0.41
ACTN1-217ENST00000556203 OR52N4Q8NGI2 321 aa12.49□□□□□ -0.41
ACTN1-217ENST00000556203 MND1Q9BWT6 205 aa12.49□□□□□ -0.41
ACTN1-217ENST00000556203 CDCA4Q9BXL8 241 aa12.49□□□□□ -0.41
ACTN1-217ENST00000556203 HMG20AQ9NP66 347 aa12.49□□□□□ -0.41
ACTN1-217ENST00000556203 ATRQ13535 2644 aa12.48□□□□□ -0.41
ACTN1-217ENST00000556203 TMEM82A0PJX8 343 aa12.48□□□□□ -0.41
ACTN1-217ENST00000556203 M0R1W7 72 aa12.48□□□□□ -0.41
ACTN1-217ENST00000556203 ZNF737O75373 536 aa12.48□□□□□ -0.41
ACTN1-217ENST00000556203 CELP19835 753 aa12.48□□□□□ -0.41
ACTN1-217ENST00000556203 SLC35A2P78381 396 aa12.48□□□□□ -0.41
ACTN1-217ENST00000556203 BAMBIQ13145 260 aa12.48□□□□□ -0.41
ACTN1-217ENST00000556203 BLMHQ13867 455 aa12.48□□□□□ -0.41
ACTN1-217ENST00000556203 ZNF146Q15072 292 aa12.48□□□□□ -0.41
ACTN1-217ENST00000556203 Q499Y3 187 aa12.48□□□□□ -0.41
ACTN1-217ENST00000556203 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.48□□□□□ -0.41
ACTN1-217ENST00000556203 ZSCAN4Q8NAM6 433 aaPredicted RBP12.48□□□□□ -0.41
ACTN1-217ENST00000556203 SPATA3Q8NHX4 192 aa12.48□□□□□ -0.41
ACTN1-217ENST00000556203 ZFAND2BQ8WV99 257 aa12.48□□□□□ -0.41
ACTN1-217ENST00000556203 ORAI1Q96D31 301 aa12.48□□□□□ -0.41
ACTN1-217ENST00000556203 CPNE2Q96FN4 548 aaPredicted RBP12.48□□□□□ -0.41
ACTN1-217ENST00000556203 CNBD2Q96M20 576 aa12.48□□□□□ -0.41
ACTN1-217ENST00000556203 DUX5Q96PT3 197 aa12.48□□□□□ -0.41
ACTN1-217ENST00000556203 GPER1Q99527 375 aa12.48□□□□□ -0.41
ACTN1-217ENST00000556203 GLS2Q9UI32 602 aa12.48□□□□□ -0.41
ACTN1-217ENST00000556203 GSTK1Q9Y2Q3 226 aa12.48□□□□□ -0.41
ACTN1-217ENST00000556203 TPRKBQ9Y3C4 175 aa12.48□□□□□ -0.41
ACTN1-217ENST00000556203 PCDHGB5Q9Y5G0 923 aa12.48□□□□□ -0.41
ACTN1-217ENST00000556203 FBN1P35555 2871 aaKnown RBP12.48□□□□□ -0.41
ACTN1-217ENST00000556203 GABRPO00591 440 aa12.47□□□□□ -0.41
ACTN1-217ENST00000556203 ALDOBP05062 364 aa12.47□□□□□ -0.41
ACTN1-217ENST00000556203 UBA52P62987 128 aaKnown RBP12.47□□□□□ -0.41
ACTN1-217ENST00000556203 DEFB112Q30KQ8 113 aa12.47□□□□□ -0.41
ACTN1-217ENST00000556203 SPIN3Q5JUX0 258 aa12.47□□□□□ -0.41
ACTN1-217ENST00000556203 TMEM200BQ69YZ2 307 aa12.47□□□□□ -0.41
ACTN1-217ENST00000556203 TNFAIP8L1Q8WVP5 186 aa12.47□□□□□ -0.41
ACTN1-217ENST00000556203 SNX22Q96L94 193 aa12.47□□□□□ -0.41
ACTN1-217ENST00000556203 OR14A2Q96R54 314 aa12.47□□□□□ -0.41
ACTN1-217ENST00000556203 OR5M11Q96RB7 305 aa12.47□□□□□ -0.41
ACTN1-217ENST00000556203 NKX3-1Q99801 234 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-217ENST00000556203 FAM192AQ9GZU8 254 aa12.47□□□□□ -0.41
ACTN1-217ENST00000556203 METTL8Q9H825 291 aaKnown RBP12.47□□□□□ -0.41
ACTN1-217ENST00000556203 SEBOXQ9HB31 216 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-217ENST00000556203 RHOFQ9HBH0 211 aa12.47□□□□□ -0.41
ACTN1-217ENST00000556203 TMEM138Q9NPI0 162 aa12.47□□□□□ -0.41
ACTN1-217ENST00000556203 A0A1W2PPH5 198 aa12.46□□□□□ -0.41
ACTN1-217ENST00000556203 A0A1W2PPK0 400 aa12.46□□□□□ -0.41
ACTN1-217ENST00000556203 DNAJC9-AS1A6NH13 148 aa12.46□□□□□ -0.41
ACTN1-217ENST00000556203 RNASEK-C17orf49H0YIS7 233 aa12.46□□□□□ -0.41
ACTN1-217ENST00000556203 PSPNO60542 156 aa12.46□□□□□ -0.41
ACTN1-217ENST00000556203 CD1AP06126 327 aa12.46□□□□□ -0.41
ACTN1-217ENST00000556203 IGFBP3P17936 291 aaPredicted RBP12.46□□□□□ -0.41
ACTN1-217ENST00000556203 GABRR1P24046 479 aa12.46□□□□□ -0.41
ACTN1-217ENST00000556203 BDKRB2P30411 391 aa12.46□□□□□ -0.41
ACTN1-217ENST00000556203 VHLP40337 213 aa12.46□□□□□ -0.41
ACTN1-217ENST00000556203 EDDM3BP56851 147 aa12.46□□□□□ -0.41
ACTN1-217ENST00000556203 BDH1Q02338 343 aa12.46□□□□□ -0.41
ACTN1-217ENST00000556203 GUCA2AQ02747 115 aa12.46□□□□□ -0.41
ACTN1-217ENST00000556203 KLRD1Q13241 179 aa12.46□□□□□ -0.41
ACTN1-217ENST00000556203 EDDM3AQ14507 147 aa12.46□□□□□ -0.41
ACTN1-217ENST00000556203 ZNF273Q14593 569 aa12.46□□□□□ -0.41
ACTN1-217ENST00000556203 IRF3Q14653 427 aa12.46□□□□□ -0.41
ACTN1-217ENST00000556203 DDI2Q5TDH0 399 aa12.46□□□□□ -0.41
ACTN1-217ENST00000556203 METAP1DQ6UB28 335 aaPredicted RBP12.46□□□□□ -0.41
ACTN1-217ENST00000556203 C17orf107Q6ZR85 190 aa12.46□□□□□ -0.41
ACTN1-217ENST00000556203 C1orf122Q6ZSJ8 110 aa12.46□□□□□ -0.41
ACTN1-217ENST00000556203 GDPD3Q7L5L3 318 aa12.46□□□□□ -0.41
ACTN1-217ENST00000556203 OR8H2Q8N162 312 aa12.46□□□□□ -0.41
ACTN1-217ENST00000556203 PXT1Q8NFP0 134 aa12.46□□□□□ -0.41
ACTN1-217ENST00000556203 OR5D13Q8NGL4 314 aa12.46□□□□□ -0.41
ACTN1-217ENST00000556203 FAM216AQ8WUB2 273 aa12.46□□□□□ -0.41
ACTN1-217ENST00000556203 TNFRSF14Q92956 283 aa12.46□□□□□ -0.41
ACTN1-217ENST00000556203 ZDHHC16Q969W1 377 aa12.46□□□□□ -0.41
ACTN1-217ENST00000556203 C1orf147Q96MC9 270 aaPredicted RBP12.46□□□□□ -0.41
ACTN1-217ENST00000556203 CHST6Q9GZX3 395 aa12.46□□□□□ -0.41
ACTN1-217ENST00000556203 DUSP21Q9H596 190 aa12.46□□□□□ -0.41
ACTN1-217ENST00000556203 EXOSC4Q9NPD3 245 aaKnown RBP12.46□□□□□ -0.41
ACTN1-217ENST00000556203 CKLFQ9UBR5 152 aa12.46□□□□□ -0.41
ACTN1-217ENST00000556203 RAB26Q9ULW5 256 aa12.46□□□□□ -0.41
ACTN1-217ENST00000556203 LSM2Q9Y333 95 aaKnown RBP12.46□□□□□ -0.41
ACTN1-217ENST00000556203 TRAV8-7A0A075B6U6 113 aa12.45□□□□□ -0.42
ACTN1-217ENST00000556203 TRBV5-7A0A0A0MS05 114 aa12.45□□□□□ -0.42
ACTN1-217ENST00000556203 A0A1W2PRD5 423 aa12.45□□□□□ -0.42
ACTN1-217ENST00000556203 A0A1W2PRF3 423 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms