RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 LYPD6BQ8NI32 183 aa9.1□□□□□ -0.95
EFCAB11-208ENST00000555872 GNRHR2Q96P88 292 aa9.1□□□□□ -0.95
EFCAB11-208ENST00000555872 ZNF587Q96SQ5 575 aaPredicted RBP9.1□□□□□ -0.95
EFCAB11-208ENST00000555872 TMEM38BQ9NVV0 291 aa9.1□□□□□ -0.95
EFCAB11-208ENST00000555872 PSG8Q9UQ74 426 aa9.1□□□□□ -0.95
EFCAB11-208ENST00000555872 XIRP2A4UGR9 3374 aa9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 COL4A3Q01955 1670 aa9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 NPIPA5A0A0B4J1W7 369 aa9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 MED19A0JLT2 244 aaPredicted RBP9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 C4orf47A7E2U8 309 aa9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 HSPB2A8KAH6 182 aa9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 UPK3AO75631 287 aa9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 LYPD3O95274 346 aa9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 KNG1P01042 644 aa9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 TACSTD2P09758 323 aa9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 FGF5P12034 268 aa9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 CDKN1AP38936 164 aa9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 P2RY2P41231 377 aa9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 SMAD3P84022 425 aaKnown RBP9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 HSPB2Q16082 182 aa9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 DNM1P34Q6PK57 102 aa9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 ASCL4Q6XD76 172 aa9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 COMMD2Q86X83 199 aa9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 OR52L2PQ8NGH6 319 aa9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 ASB10Q8WXI3 467 aa9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 FAM3CQ92520 227 aa9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 IKZF2Q9UKS7 526 aa9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 KLHDC2Q9Y2U9 406 aa9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 UBE2J1Q9Y385 318 aaPredicted RBP9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 SPAARA0A1B0GVQ0 90 aa9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 LINC01553A4QN01 128 aa9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 ZNF891A8MT65 544 aaPredicted RBP9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 OR11H12B2RN74 326 aa9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 MSR1P21757 451 aa9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 CCKBRP32239 447 aa9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 RPL4P36578 427 aaKnown RBP9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 SOHLH1Q5JUK2 328 aa9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 MRPL2Q5T653 305 aaKnown RBP9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 CARD17Q5XLA6 110 aa9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 MOGAT3Q86VF5 341 aa9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 ZDHHC22Q8N966 263 aa9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 OR11H1Q8NG94 326 aa9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 OR11H2Q8NH07 326 aa9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 FRZBQ92765 325 aa9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 NKD1Q969G9 470 aa9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 ANKRD9Q96BM1 317 aaPredicted RBP9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 GTSF1LQ9H1H1 148 aa9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 SERTAD3Q9UJW9 196 aa9.09□□□□□ -0.95
EFCAB11-208ENST00000555872 ATG2AQ2TAZ0 1938 aa9.08□□□□□ -0.96
EFCAB11-208ENST00000555872 A0A0A6YYD5 115 aa9.08□□□□□ -0.96
EFCAB11-208ENST00000555872 TRAPPC2LH3BP13 241 aa9.08□□□□□ -0.96
EFCAB11-208ENST00000555872 K7EQM0 130 aa9.08□□□□□ -0.96
EFCAB11-208ENST00000555872 SLC17A2O00624 439 aa9.08□□□□□ -0.96
EFCAB11-208ENST00000555872 GPR75O95800 540 aa9.08□□□□□ -0.96
EFCAB11-208ENST00000555872 CD70P32970 193 aa9.08□□□□□ -0.96
EFCAB11-208ENST00000555872 DLK1P80370 383 aa9.08□□□□□ -0.96
EFCAB11-208ENST00000555872 PMPCAQ10713 525 aa9.08□□□□□ -0.96
EFCAB11-208ENST00000555872 CEACAM21Q3KPI0 293 aa9.08□□□□□ -0.96
EFCAB11-208ENST00000555872 PDLIM3Q53GG5 364 aaPredicted RBP9.08□□□□□ -0.96
EFCAB11-208ENST00000555872 ZNF684Q5T5D7 378 aa9.08□□□□□ -0.96
EFCAB11-208ENST00000555872 WDR82Q6UXN9 313 aa9.08□□□□□ -0.96
EFCAB11-208ENST00000555872 OR8I2Q8N0Y5 310 aa9.08□□□□□ -0.96
EFCAB11-208ENST00000555872 CADM4Q8NFZ8 388 aa9.08□□□□□ -0.96
EFCAB11-208ENST00000555872 MFSD8Q8NHS3 518 aa9.08□□□□□ -0.96
EFCAB11-208ENST00000555872 MARCH1Q8TCQ1 289 aa9.08□□□□□ -0.96
EFCAB11-208ENST00000555872 GLYATL1Q969I3 302 aa9.08□□□□□ -0.96
EFCAB11-208ENST00000555872 CLN8Q9UBY8 286 aa9.08□□□□□ -0.96
EFCAB11-208ENST00000555872 ZNF107Q9UII5 783 aaPredicted RBP9.08□□□□□ -0.96
EFCAB11-208ENST00000555872 LAMA3Q16787 3333 aa9.08□□□□□ -0.96
EFCAB11-208ENST00000555872 TRBV5-7A0A0A0MS05 114 aa9.08□□□□□ -0.96
EFCAB11-208ENST00000555872 TAAR5O14804 337 aa9.08□□□□□ -0.96
EFCAB11-208ENST00000555872 RBFOX2O43251 390 aaKnown RBP eCLIP9.08□□□□□ -0.96
EFCAB11-208ENST00000555872 PDE6DO43924 150 aa9.08□□□□□ -0.96
EFCAB11-208ENST00000555872 AIFM1O95831 613 aa9.08□□□□□ -0.96
EFCAB11-208ENST00000555872 HRH1P35367 487 aa9.08□□□□□ -0.96
EFCAB11-208ENST00000555872 RHOGP84095 191 aa9.08□□□□□ -0.96
EFCAB11-208ENST00000555872 FHL1Q13642 323 aa9.08□□□□□ -0.96
EFCAB11-208ENST00000555872 VAMP3Q15836 100 aa9.08□□□□□ -0.96
EFCAB11-208ENST00000555872 C5orf47Q569G3 176 aa9.08□□□□□ -0.96
EFCAB11-208ENST00000555872 OR5AR1Q8NGP9 310 aa9.08□□□□□ -0.96
EFCAB11-208ENST00000555872 OR10X1Q8NGY0 326 aa9.08□□□□□ -0.96
EFCAB11-208ENST00000555872 OR10C1Q96KK4 312 aa9.08□□□□□ -0.96
EFCAB11-208ENST00000555872 TSSK2Q96PF2 358 aa9.08□□□□□ -0.96
EFCAB11-208ENST00000555872 KLF16Q9BXK1 252 aaPredicted RBP9.08□□□□□ -0.96
EFCAB11-208ENST00000555872 HDAC8Q9BY41 377 aa9.08□□□□□ -0.96
EFCAB11-208ENST00000555872 IL21Q9HBE4 155 aa9.08□□□□□ -0.96
EFCAB11-208ENST00000555872 OR4C45A6NMZ5 311 aa9.07□□□□□ -0.96
EFCAB11-208ENST00000555872 RAB27BO00194 218 aa9.07□□□□□ -0.96
EFCAB11-208ENST00000555872 C1QL1O75973 258 aa9.07□□□□□ -0.96
EFCAB11-208ENST00000555872 NGFRP08138 427 aa9.07□□□□□ -0.96
EFCAB11-208ENST00000555872 CHATP28329 748 aa9.07□□□□□ -0.96
EFCAB11-208ENST00000555872 RPS27P42677 84 aaKnown RBP9.07□□□□□ -0.96
EFCAB11-208ENST00000555872 SLC6A8P48029 635 aa9.07□□□□□ -0.96
EFCAB11-208ENST00000555872 C4orf48Q5BLP8 95 aa9.07□□□□□ -0.96
EFCAB11-208ENST00000555872 TMEM183AQ8IXX5 376 aa9.07□□□□□ -0.96
EFCAB11-208ENST00000555872 SUMF2Q8NBJ7 301 aa9.07□□□□□ -0.96
EFCAB11-208ENST00000555872 KREMEN2Q8NCW0 462 aa9.07□□□□□ -0.96
EFCAB11-208ENST00000555872 NPEPL1Q8NDH3 523 aa9.07□□□□□ -0.96
EFCAB11-208ENST00000555872 OR9A4Q8NGU2 314 aa9.07□□□□□ -0.96
EFCAB11-208ENST00000555872 SNX22Q96L94 193 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms