RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 ANGPTL6Q8NI99 470 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 MED30Q96HR3 178 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 CMTM3Q96MX0 182 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 URM1Q9BTM9 101 aaKnown RBP10.44□□□□□ -0.74
SHMT2-221ENST00000555773 TMEM59Q9BXS4 323 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 SPATA2Q9UM82 520 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 ST3GAL6Q9Y274 331 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 CCDC168Q8NDH2 2452 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 A0A075B6Q4 140 aa10.43□□□□□ -0.74
SHMT2-221ENST00000555773 TMEM272A0A1B0GTI8 110 aa10.43□□□□□ -0.74
SHMT2-221ENST00000555773 METTL21EPA6NDL7 271 aa10.43□□□□□ -0.74
SHMT2-221ENST00000555773 ZNF205O95201 554 aa10.43□□□□□ -0.74
SHMT2-221ENST00000555773 MPIG6BO95866 241 aa10.43□□□□□ -0.74
SHMT2-221ENST00000555773 PAHP00439 452 aa10.43□□□□□ -0.74
SHMT2-221ENST00000555773 CHRM2P08172 466 aa10.43□□□□□ -0.74
SHMT2-221ENST00000555773 SNRPBP14678 240 aaKnown RBP10.43□□□□□ -0.74
SHMT2-221ENST00000555773 NR4A2P43354 598 aa10.43□□□□□ -0.74
SHMT2-221ENST00000555773 RBM11P57052 281 aaKnown RBP10.43□□□□□ -0.74
SHMT2-221ENST00000555773 RPS27AP62979 156 aaKnown RBP10.43□□□□□ -0.74
SHMT2-221ENST00000555773 UNC119Q13432 240 aa10.43□□□□□ -0.74
SHMT2-221ENST00000555773 MPV17LQ2QL34 196 aa10.43□□□□□ -0.74
SHMT2-221ENST00000555773 Q5PR19 223 aa10.43□□□□□ -0.74
SHMT2-221ENST00000555773 STUMQ69YW2 141 aa10.43□□□□□ -0.74
SHMT2-221ENST00000555773 DCDC5Q6ZRR9 648 aa10.43□□□□□ -0.74
SHMT2-221ENST00000555773 BATF2Q8N1L9 274 aa10.43□□□□□ -0.74
SHMT2-221ENST00000555773 CHST4Q8NCG5 386 aa10.43□□□□□ -0.74
SHMT2-221ENST00000555773 OR5T2Q8NGG2 359 aa10.43□□□□□ -0.74
SHMT2-221ENST00000555773 SEH1LQ96EE3 360 aa10.43□□□□□ -0.74
SHMT2-221ENST00000555773 SDSLQ96GA7 329 aa10.43□□□□□ -0.74
SHMT2-221ENST00000555773 TMEM246Q9BRR3 403 aa10.43□□□□□ -0.74
SHMT2-221ENST00000555773 TM2D1Q9BX74 207 aa10.43□□□□□ -0.74
SHMT2-221ENST00000555773 SELENOIQ9C0D9 397 aa10.43□□□□□ -0.74
SHMT2-221ENST00000555773 BPESC1Q9GZL8 116 aa10.43□□□□□ -0.74
SHMT2-221ENST00000555773 BANF2Q9H503 90 aa10.43□□□□□ -0.74
SHMT2-221ENST00000555773 IFT22Q9H7X7 185 aa10.43□□□□□ -0.74
SHMT2-221ENST00000555773 KAAG1Q9UBP8 84 aa10.43□□□□□ -0.74
SHMT2-221ENST00000555773 MIOXQ9UGB7 285 aa10.43□□□□□ -0.74
SHMT2-221ENST00000555773 ANKRD17O75179 2603 aaKnown RBP10.43□□□□□ -0.74
SHMT2-221ENST00000555773 IGKV1D-17A0A075B6S4 117 aa10.42□□□□□ -0.74
SHMT2-221ENST00000555773 IGHV3OR15-7A0A075B7D8 119 aa10.42□□□□□ -0.74
SHMT2-221ENST00000555773 A0A0B4J203 849 aa10.42□□□□□ -0.74
SHMT2-221ENST00000555773 A0A1W2PP11 408 aa10.42□□□□□ -0.74
SHMT2-221ENST00000555773 ISPDA4D126 451 aa10.42□□□□□ -0.74
SHMT2-221ENST00000555773 DEGS1O15121 323 aa10.42□□□□□ -0.74
SHMT2-221ENST00000555773 SCGNO76038 276 aa10.42□□□□□ -0.74
SHMT2-221ENST00000555773 HAND1O96004 215 aa10.42□□□□□ -0.74
SHMT2-221ENST00000555773 GYPAP02724 150 aa10.42□□□□□ -0.74
SHMT2-221ENST00000555773 LMO1P25800 156 aa10.42□□□□□ -0.74
SHMT2-221ENST00000555773 RBMXP38159 391 aaKnown RBP10.42□□□□□ -0.74
SHMT2-221ENST00000555773 ART1P52961 327 aa10.42□□□□□ -0.74
SHMT2-221ENST00000555773 HOXA4Q00056 320 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-221ENST00000555773 AVPI1Q5T686 147 aa10.42□□□□□ -0.74
SHMT2-221ENST00000555773 OR10K2Q6IF99 312 aa10.42□□□□□ -0.74
SHMT2-221ENST00000555773 ZNF788Q6ZQV5 615 aa10.42□□□□□ -0.74
SHMT2-221ENST00000555773 SLC36A1Q7Z2H8 476 aa10.42□□□□□ -0.74
SHMT2-221ENST00000555773 ZNF561Q8N587 486 aa10.42□□□□□ -0.74
SHMT2-221ENST00000555773 FAM89BQ8N5H3 189 aa10.42□□□□□ -0.74
SHMT2-221ENST00000555773 C19orf18Q8NEA5 215 aa10.42□□□□□ -0.74
SHMT2-221ENST00000555773 FAM46BQ96A09 425 aa10.42□□□□□ -0.74
SHMT2-221ENST00000555773 Q96M66 194 aa10.42□□□□□ -0.74
SHMT2-221ENST00000555773 SLIRPQ9GZT3 109 aaKnown RBP10.42□□□□□ -0.74
SHMT2-221ENST00000555773 LPAR5Q9H1C0 372 aa10.42□□□□□ -0.74
SHMT2-221ENST00000555773 ZNF665Q9H7R5 613 aa10.42□□□□□ -0.74
SHMT2-221ENST00000555773 SPACA1Q9HBV2 294 aa10.42□□□□□ -0.74
SHMT2-221ENST00000555773 ZNF222Q9UK12 451 aa10.42□□□□□ -0.74
SHMT2-221ENST00000555773 PCDHB10Q9UN67 800 aa10.42□□□□□ -0.74
SHMT2-221ENST00000555773 A3GALT2U3KPV4 340 aa10.42□□□□□ -0.74
SHMT2-221ENST00000555773 DYSFO75923 2080 aa10.42□□□□□ -0.74
SHMT2-221ENST00000555773 IGHV4-30-2A0A087WSY4 118 aa10.41□□□□□ -0.74
SHMT2-221ENST00000555773 NKX6-3A6NJ46 265 aa10.41□□□□□ -0.74
SHMT2-221ENST00000555773 GEMIN2O14893 280 aaKnown RBP10.41□□□□□ -0.74
SHMT2-221ENST00000555773 SIGLEC5O15389 551 aa10.41□□□□□ -0.74
SHMT2-221ENST00000555773 GLAP06280 429 aa10.41□□□□□ -0.74
SHMT2-221ENST00000555773 WNT2P09544 360 aa10.41□□□□□ -0.74
SHMT2-221ENST00000555773 DUSP1P28562 367 aa10.41□□□□□ -0.74
SHMT2-221ENST00000555773 GABRA2P47869 451 aa10.41□□□□□ -0.74
SHMT2-221ENST00000555773 PITPNBP48739 271 aa10.41□□□□□ -0.74
SHMT2-221ENST00000555773 IL13RA1P78552 427 aa10.41□□□□□ -0.74
SHMT2-221ENST00000555773 TAF9Q16594 264 aa10.41□□□□□ -0.74
SHMT2-221ENST00000555773 PIGYQ3MUY2 71 aa10.41□□□□□ -0.74
SHMT2-221ENST00000555773 RAB12Q6IQ22 244 aa10.41□□□□□ -0.74
SHMT2-221ENST00000555773 Q6P435 159 aa10.41□□□□□ -0.74
SHMT2-221ENST00000555773 CD177Q8N6Q3 437 aa10.41□□□□□ -0.74
SHMT2-221ENST00000555773 OR56B1Q8NGI3 324 aa10.41□□□□□ -0.74
SHMT2-221ENST00000555773 OR5H6Q8NGV6 325 aa10.41□□□□□ -0.74
SHMT2-221ENST00000555773 PPP1R35Q8TAP8 253 aa10.41□□□□□ -0.74
SHMT2-221ENST00000555773 LGALS14Q8TCE9 139 aa10.41□□□□□ -0.74
SHMT2-221ENST00000555773 RAB40AQ8WXH6 277 aa10.41□□□□□ -0.74
SHMT2-221ENST00000555773 SNX22Q96L94 193 aa10.41□□□□□ -0.74
SHMT2-221ENST00000555773 CCL13Q99616 98 aa10.41□□□□□ -0.74
SHMT2-221ENST00000555773 GAL3ST1Q99999 423 aa10.41□□□□□ -0.74
SHMT2-221ENST00000555773 DCUN1D5Q9BTE7 237 aa10.41□□□□□ -0.74
SHMT2-221ENST00000555773 NXF2Q9GZY0 626 aaKnown RBP10.41□□□□□ -0.74
SHMT2-221ENST00000555773 ABCG5Q9H222 651 aa10.41□□□□□ -0.74
SHMT2-221ENST00000555773 MMP27Q9H306 513 aa10.41□□□□□ -0.74
SHMT2-221ENST00000555773 PATZ1Q9HBE1 687 aaKnown RBP10.41□□□□□ -0.74
SHMT2-221ENST00000555773 IL36RNQ9UBH0 155 aa10.41□□□□□ -0.74
SHMT2-221ENST00000555773 COMMD3Q9UBI1 195 aa10.41□□□□□ -0.74
SHMT2-221ENST00000555773 OR14J1Q9UGF5 321 aa10.41□□□□□ -0.74
SHMT2-221ENST00000555773 A0A0A6YYH2 397 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms