RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 CMSS1Q9BQ75 279 aaKnown RBP20.56■□□□□ 0.88
STRN3-207ENST00000555358 HDHD3Q9BSH5 251 aaPredicted RBP20.56■□□□□ 0.88
STRN3-207ENST00000555358 MRPS18CQ9Y3D5 142 aaKnown RBP20.56■□□□□ 0.88
STRN3-207ENST00000555358 SPTBN2O15020 2390 aa20.56■□□□□ 0.88
STRN3-207ENST00000555358 CD80P33681 288 aa20.55■□□□□ 0.88
STRN3-207ENST00000555358 GFRA1P56159 465 aa20.55■□□□□ 0.88
STRN3-207ENST00000555358 FOXL2NBQ6ZUU3 175 aa20.55■□□□□ 0.88
STRN3-207ENST00000555358 SKA3Q8IX90 412 aa20.55■□□□□ 0.88
STRN3-207ENST00000555358 MDS2Q8NDY4 140 aa20.55■□□□□ 0.88
STRN3-207ENST00000555358 LYPD6BQ8NI32 183 aa20.55■□□□□ 0.88
STRN3-207ENST00000555358 S100A13Q99584 98 aa20.55■□□□□ 0.88
STRN3-207ENST00000555358 C12orf57Q99622 126 aa20.55■□□□□ 0.88
STRN3-207ENST00000555358 TTTY12Q9BZ98 90 aa20.55■□□□□ 0.88
STRN3-207ENST00000555358 COLCA2A8K830 154 aa20.55■□□□□ 0.88
STRN3-207ENST00000555358 AGPAT2O15120 278 aa20.55■□□□□ 0.88
STRN3-207ENST00000555358 OTX1P32242 354 aaPredicted RBP20.55■□□□□ 0.88
STRN3-207ENST00000555358 CSNK1A1P48729 337 aa20.55■□□□□ 0.88
STRN3-207ENST00000555358 F2RL1P55085 397 aa20.55■□□□□ 0.88
STRN3-207ENST00000555358 HIST1H3AP68431 136 aa20.55■□□□□ 0.88
STRN3-207ENST00000555358 HIST2H3PS2Q5TEC6 136 aa20.55■□□□□ 0.88
STRN3-207ENST00000555358 GGNBP1Q5YKI7 109 aa20.55■□□□□ 0.88
STRN3-207ENST00000555358 DHRS11Q6UWP2 260 aa20.55■□□□□ 0.88
STRN3-207ENST00000555358 HIST2H3AQ71DI3 136 aa20.55■□□□□ 0.88
STRN3-207ENST00000555358 SGPP2Q8IWX5 399 aa20.55■□□□□ 0.88
STRN3-207ENST00000555358 TMEM54Q969K7 222 aa20.55■□□□□ 0.88
STRN3-207ENST00000555358 MRPL24Q96A35 216 aaKnown RBP20.55■□□□□ 0.88
STRN3-207ENST00000555358 Q96M66 194 aa20.55■□□□□ 0.88
STRN3-207ENST00000555358 NAA11Q9BSU3 229 aaPredicted RBP20.55■□□□□ 0.88
STRN3-207ENST00000555358 ELL3Q9HB65 397 aaPredicted RBP20.55■□□□□ 0.88
STRN3-207ENST00000555358 URB1O60287 2271 aaKnown RBP20.54■□□□□ 0.88
STRN3-207ENST00000555358 PROB1E7EW31 1015 aa20.54■□□□□ 0.88
STRN3-207ENST00000555358 JTBO76095 146 aa20.54■□□□□ 0.88
STRN3-207ENST00000555358 GABRR1P24046 479 aa20.54■□□□□ 0.88
STRN3-207ENST00000555358 MAGEA5P43359 124 aa20.54■□□□□ 0.88
STRN3-207ENST00000555358 TMEM33P57088 247 aa20.54■□□□□ 0.88
STRN3-207ENST00000555358 RAC3P60763 192 aa20.54■□□□□ 0.88
STRN3-207ENST00000555358 RSPO4Q2I0M5 234 aaPredicted RBP20.54■□□□□ 0.88
STRN3-207ENST00000555358 RPUSD3Q6P087 351 aaKnown RBP20.54■□□□□ 0.88
STRN3-207ENST00000555358 Q6ZRG5 221 aa20.54■□□□□ 0.88
STRN3-207ENST00000555358 OR9K2Q8NGE7 335 aa20.54■□□□□ 0.88
STRN3-207ENST00000555358 LIME1Q9H400 295 aa20.54■□□□□ 0.88
STRN3-207ENST00000555358 ZNF552Q9H707 407 aaPredicted RBP20.54■□□□□ 0.88
STRN3-207ENST00000555358 POMT1Q9Y6A1 747 aa20.54■□□□□ 0.88
STRN3-207ENST00000555358 LAMA5O15230 3695 aa20.54■□□□□ 0.88
STRN3-207ENST00000555358 DCHS1Q96JQ0 3298 aa20.54■□□□□ 0.88
STRN3-207ENST00000555358 CXCL13O43927 109 aa20.54■□□□□ 0.88
STRN3-207ENST00000555358 SP1P08047 785 aa20.54■□□□□ 0.88
STRN3-207ENST00000555358 KCNJ3P48549 501 aa20.54■□□□□ 0.88
STRN3-207ENST00000555358 ZNF133P52736 654 aaPredicted RBP20.54■□□□□ 0.88
STRN3-207ENST00000555358 CARD18P57730 90 aa20.54■□□□□ 0.88
STRN3-207ENST00000555358 ADGRG7Q96K78 797 aa20.54■□□□□ 0.88
STRN3-207ENST00000555358 NPIPA2E9PIF3 369 aa20.53■□□□□ 0.88
STRN3-207ENST00000555358 NPIPA3F8WFD2 350 aa20.53■□□□□ 0.88
STRN3-207ENST00000555358 OR8U9P0C7N5 309 aa20.53■□□□□ 0.88
STRN3-207ENST00000555358 NR2C1P13056 603 aa20.53■□□□□ 0.88
STRN3-207ENST00000555358 DVL1P1P54792 670 aaPredicted RBP20.53■□□□□ 0.88
STRN3-207ENST00000555358 RRADP55042 308 aa20.53■□□□□ 0.88
STRN3-207ENST00000555358 OR8U1Q8NH10 309 aa20.53■□□□□ 0.88
STRN3-207ENST00000555358 OR10D3Q8NH80 312 aa20.53■□□□□ 0.88
STRN3-207ENST00000555358 C2CD4CQ8TF44 421 aa20.53■□□□□ 0.88
STRN3-207ENST00000555358 KIRREL1Q96J84 757 aa20.53■□□□□ 0.88
STRN3-207ENST00000555358 SULT4A1Q9BR01 284 aa20.53■□□□□ 0.88
STRN3-207ENST00000555358 RNF122Q9H9V4 155 aa20.53■□□□□ 0.88
STRN3-207ENST00000555358 PLEKHJ1Q9NW61 149 aa20.53■□□□□ 0.88
STRN3-207ENST00000555358 ANXA10Q9UJ72 324 aa20.53■□□□□ 0.88
STRN3-207ENST00000555358 NME2P1O60361 137 aa20.53■□□□□ 0.88
STRN3-207ENST00000555358 DBHP09172 617 aa20.53■□□□□ 0.88
STRN3-207ENST00000555358 PEA15Q15121 130 aa20.53■□□□□ 0.88
STRN3-207ENST00000555358 LRRC18Q8N456 261 aa20.53■□□□□ 0.88
STRN3-207ENST00000555358 C10orf35Q96D05 121 aa20.53■□□□□ 0.88
STRN3-207ENST00000555358 MTRF1O75570 445 aaKnown RBP20.52■□□□□ 0.88
STRN3-207ENST00000555358 VAMP5O95183 116 aa20.52■□□□□ 0.88
STRN3-207ENST00000555358 GUCA1AP43080 201 aaPredicted RBP20.52■□□□□ 0.88
STRN3-207ENST00000555358 MEOX1P50221 254 aa20.52■□□□□ 0.88
STRN3-207ENST00000555358 CCL11P51671 97 aa20.52■□□□□ 0.88
STRN3-207ENST00000555358 FAM3AP98173 230 aa20.52■□□□□ 0.88
STRN3-207ENST00000555358 SMCO1Q147U7 214 aa20.52■□□□□ 0.88
STRN3-207ENST00000555358 ZFP82Q8N141 532 aa20.52■□□□□ 0.88
STRN3-207ENST00000555358 TMEM251Q8N6I4 163 aa20.52■□□□□ 0.88
STRN3-207ENST00000555358 ZIC4Q8N9L1 334 aa20.52■□□□□ 0.88
STRN3-207ENST00000555358 OR2V1Q8NHB1 315 aa20.52■□□□□ 0.88
STRN3-207ENST00000555358 SMIM3Q9BZL3 60 aa20.52■□□□□ 0.88
STRN3-207ENST00000555358 CACFD1Q9UGQ2 172 aa20.52■□□□□ 0.88
STRN3-207ENST00000555358 LSM5Q9Y4Y9 91 aaKnown RBP20.52■□□□□ 0.88
STRN3-207ENST00000555358 M0R135 149 aa20.51■□□□□ 0.87
STRN3-207ENST00000555358 SOX8P57073 446 aa20.51■□□□□ 0.87
STRN3-207ENST00000555358 FAM76BQ5HYJ3 339 aa20.51■□□□□ 0.87
STRN3-207ENST00000555358 UBAC2Q8NBM4 344 aa20.51■□□□□ 0.87
STRN3-207ENST00000555358 ERGIC1Q969X5 290 aa20.51■□□□□ 0.87
STRN3-207ENST00000555358 ZNF799Q96GE5 643 aa20.51■□□□□ 0.87
STRN3-207ENST00000555358 ZNF845Q96IR2 970 aaPredicted RBP20.51■□□□□ 0.87
STRN3-207ENST00000555358 B4GALT7Q9UBV7 327 aa20.51■□□□□ 0.87
STRN3-207ENST00000555358 IFNA21P01568 189 aa20.51■□□□□ 0.87
STRN3-207ENST00000555358 FOLR2P14207 255 aa20.51■□□□□ 0.87
STRN3-207ENST00000555358 PAX6P26367 422 aa20.51■□□□□ 0.87
STRN3-207ENST00000555358 PLGLB1Q02325 96 aa20.51■□□□□ 0.87
STRN3-207ENST00000555358 CLN3Q13286 438 aa20.51■□□□□ 0.87
STRN3-207ENST00000555358 SNAI3Q3KNW1 292 aa20.51■□□□□ 0.87
STRN3-207ENST00000555358 TMEM123Q8N131 208 aa20.51■□□□□ 0.87
STRN3-207ENST00000555358 ARV1Q9H2C2 271 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms