RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 CCDC22O60826 627 aa3.64□□□□□ -1.83
VRK1-203ENST00000555067 SOX14O95416 240 aa3.64□□□□□ -1.83
VRK1-203ENST00000555067 HLA-DRAP01903 254 aa3.64□□□□□ -1.83
VRK1-203ENST00000555067 PRPS1L1P21108 318 aa3.64□□□□□ -1.83
VRK1-203ENST00000555067 PSMA1P25786 263 aaKnown RBP3.64□□□□□ -1.83
VRK1-203ENST00000555067 GNG10P50151 68 aa3.64□□□□□ -1.83
VRK1-203ENST00000555067 TIMM10P62072 90 aa3.64□□□□□ -1.83
VRK1-203ENST00000555067 RANP62826 216 aaKnown RBP3.64□□□□□ -1.83
VRK1-203ENST00000555067 ARG2P78540 354 aa3.64□□□□□ -1.83
VRK1-203ENST00000555067 GINS1Q14691 196 aa3.64□□□□□ -1.83
VRK1-203ENST00000555067 PDK2Q15119 407 aa3.64□□□□□ -1.83
VRK1-203ENST00000555067 SMUG1Q53HV7 270 aa3.64□□□□□ -1.83
VRK1-203ENST00000555067 CLEC12AQ5QGZ9 265 aa3.64□□□□□ -1.83
VRK1-203ENST00000555067 SAXO2Q658L1 398 aa3.64□□□□□ -1.83
VRK1-203ENST00000555067 CEMP1Q6PRD7 247 aaPredicted RBP3.64□□□□□ -1.83
VRK1-203ENST00000555067 OPN5Q6U736 354 aa3.64□□□□□ -1.83
VRK1-203ENST00000555067 LYPD2Q6UXB3 125 aa3.64□□□□□ -1.83
VRK1-203ENST00000555067 CLEC19AQ6UXS0 136 aa3.64□□□□□ -1.83
VRK1-203ENST00000555067 FAM231DQ6ZW35 169 aa3.64□□□□□ -1.83
VRK1-203ENST00000555067 PRSS58Q8IYP2 241 aa3.64□□□□□ -1.83
VRK1-203ENST00000555067 OR52E4Q8NGH9 312 aa3.64□□□□□ -1.83
VRK1-203ENST00000555067 DCAKDQ8WVC6 231 aa3.64□□□□□ -1.83
VRK1-203ENST00000555067 GHSRQ92847 366 aa3.64□□□□□ -1.83
VRK1-203ENST00000555067 CLDN23Q96B33 292 aa3.64□□□□□ -1.83
VRK1-203ENST00000555067 PPCDCQ96CD2 204 aa3.64□□□□□ -1.83
VRK1-203ENST00000555067 C18orf15Q96N68 181 aa3.64□□□□□ -1.83
VRK1-203ENST00000555067 SPACA5Q96QH8 159 aa3.64□□□□□ -1.83
VRK1-203ENST00000555067 TIMM17AQ99595 171 aa3.64□□□□□ -1.83
VRK1-203ENST00000555067 LINC00597Q9H2U6 94 aa3.64□□□□□ -1.83
VRK1-203ENST00000555067 FBXL15Q9H469 300 aa3.64□□□□□ -1.83
VRK1-203ENST00000555067 POMKQ9H5K3 350 aa3.64□□□□□ -1.83
VRK1-203ENST00000555067 TMEM9Q9P0T7 183 aa3.64□□□□□ -1.83
VRK1-203ENST00000555067 PRO0628Q9UI54 55 aa3.64□□□□□ -1.83
VRK1-203ENST00000555067 EVC2Q86UK5 1308 aa3.64□□□□□ -1.83
VRK1-203ENST00000555067 DNASE2O00115 360 aaPredicted RBP3.63□□□□□ -1.83
VRK1-203ENST00000555067 SERPINB7O75635 380 aa3.63□□□□□ -1.83
VRK1-203ENST00000555067 HLA-DPB1P04440 258 aa3.63□□□□□ -1.83
VRK1-203ENST00000555067 IFNA16P05015 189 aa3.63□□□□□ -1.83
VRK1-203ENST00000555067 MRPL3P09001 348 aaKnown RBP3.63□□□□□ -1.83
VRK1-203ENST00000555067 SPNP16150 400 aa3.63□□□□□ -1.83
VRK1-203ENST00000555067 CRISP2P16562 243 aa3.63□□□□□ -1.83
VRK1-203ENST00000555067 ATF1P18846 271 aa3.63□□□□□ -1.83
VRK1-203ENST00000555067 G0S2P27469 103 aa3.63□□□□□ -1.83
VRK1-203ENST00000555067 HTR1EP28566 365 aa3.63□□□□□ -1.83
VRK1-203ENST00000555067 SSTR5P35346 364 aa3.63□□□□□ -1.83
VRK1-203ENST00000555067 PMELP40967 661 aa3.63□□□□□ -1.83
VRK1-203ENST00000555067 ACOT2P49753 483 aa3.63□□□□□ -1.83
VRK1-203ENST00000555067 GFERP55789 205 aa3.63□□□□□ -1.83
VRK1-203ENST00000555067 ARF6P62330 175 aa3.63□□□□□ -1.83
VRK1-203ENST00000555067 CRADDP78560 199 aa3.63□□□□□ -1.83
VRK1-203ENST00000555067 IFITM3Q01628 133 aa3.63□□□□□ -1.83
VRK1-203ENST00000555067 SRSF6Q13247 344 aaKnown RBP3.63□□□□□ -1.83
VRK1-203ENST00000555067 ZNF235Q14590 738 aa3.63□□□□□ -1.83
VRK1-203ENST00000555067 TMED2Q15363 201 aa3.63□□□□□ -1.83
VRK1-203ENST00000555067 TMEM183BQ1AE95 376 aa3.63□□□□□ -1.83
VRK1-203ENST00000555067 TMEM176BQ3YBM2 270 aaPredicted RBP3.63□□□□□ -1.83
VRK1-203ENST00000555067 ZNF658BQ4V348 819 aaPredicted RBP3.63□□□□□ -1.83
VRK1-203ENST00000555067 TSPO2Q5TGU0 170 aa3.63□□□□□ -1.83
VRK1-203ENST00000555067 SPOPLQ6IQ16 392 aa3.63□□□□□ -1.83
VRK1-203ENST00000555067 TMEM183AQ8IXX5 376 aa3.63□□□□□ -1.83
VRK1-203ENST00000555067 GATD1Q8NB37 220 aa3.63□□□□□ -1.83
VRK1-203ENST00000555067 OR4C13Q8NGP0 309 aa3.63□□□□□ -1.83
VRK1-203ENST00000555067 SLC37A2Q8TED4 501 aa3.63□□□□□ -1.83
VRK1-203ENST00000555067 SMIM12Q96EX1 92 aa3.63□□□□□ -1.83
VRK1-203ENST00000555067 KCNS1Q96KK3 526 aa3.63□□□□□ -1.83
VRK1-203ENST00000555067 LINC00167Q96N53 147 aa3.63□□□□□ -1.83
VRK1-203ENST00000555067 PARP12Q9H0J9 701 aaKnown RBP3.63□□□□□ -1.83
VRK1-203ENST00000555067 OR51E2Q9H255 320 aa3.63□□□□□ -1.83
VRK1-203ENST00000555067 SLC2A9Q9NRM0 540 aa3.63□□□□□ -1.83
VRK1-203ENST00000555067 OPN4Q9UHM6 478 aa3.63□□□□□ -1.83
VRK1-203ENST00000555067 ZNF337Q9Y3M9 751 aa3.63□□□□□ -1.83
VRK1-203ENST00000555067 TNRQ92752 1358 aa3.63□□□□□ -1.83
VRK1-203ENST00000555067 ZCCHC6Q5VYS8 1495 aaKnown RBP3.62□□□□□ -1.83
VRK1-203ENST00000555067 MYO15BQ96JP2 1530 aa3.62□□□□□ -1.83
VRK1-203ENST00000555067 IGHV3-74A0A0B4J1X5 117 aa3.62□□□□□ -1.83
VRK1-203ENST00000555067 ZFP92A6NM28 416 aa3.62□□□□□ -1.83
VRK1-203ENST00000555067 NDUFC2-KCTD14E9PQ53 114 aa3.62□□□□□ -1.83
VRK1-203ENST00000555067 I3L4J1 428 aa3.62□□□□□ -1.83
VRK1-203ENST00000555067 M0R1X1 148 aa3.62□□□□□ -1.83
VRK1-203ENST00000555067 PDCD6O75340 191 aa3.62□□□□□ -1.83
VRK1-203ENST00000555067 HIST1H1EP10412 219 aaKnown RBP3.62□□□□□ -1.83
VRK1-203ENST00000555067 RPL12P30050 165 aaKnown RBP3.62□□□□□ -1.83
VRK1-203ENST00000555067 ADORA1P30542 326 aa3.62□□□□□ -1.83
VRK1-203ENST00000555067 PYCR1P32322 319 aa3.62□□□□□ -1.83
VRK1-203ENST00000555067 KIR3DL2P43630 455 aa3.62□□□□□ -1.83
VRK1-203ENST00000555067 IDH3GP51553 393 aaPredicted RBP3.62□□□□□ -1.83
VRK1-203ENST00000555067 PPP1R1AQ13522 171 aa3.62□□□□□ -1.83
VRK1-203ENST00000555067 CLEC12BQ2HXU8 276 aa3.62□□□□□ -1.83
VRK1-203ENST00000555067 FBXL19-AS1Q494R0 122 aa3.62□□□□□ -1.83
VRK1-203ENST00000555067 TMEM255AQ5JRV8 349 aa3.62□□□□□ -1.83
VRK1-203ENST00000555067 SPIN3Q5JUX0 258 aa3.62□□□□□ -1.83
VRK1-203ENST00000555067 IL34Q6ZMJ4 242 aa3.62□□□□□ -1.83
VRK1-203ENST00000555067 DGAT2L6Q6ZPD8 337 aa3.62□□□□□ -1.83
VRK1-203ENST00000555067 S100A7AQ86SG5 101 aa3.62□□□□□ -1.83
VRK1-203ENST00000555067 CALHM1Q8IU99 346 aa3.62□□□□□ -1.83
VRK1-203ENST00000555067 LINC00337Q8N6G1 96 aa3.62□□□□□ -1.83
VRK1-203ENST00000555067 C14orf178Q8N769 122 aaPredicted RBP3.62□□□□□ -1.83
VRK1-203ENST00000555067 SRSF12Q8WXF0 261 aaKnown RBP3.62□□□□□ -1.83
VRK1-203ENST00000555067 ASB13Q8WXK3 278 aa3.62□□□□□ -1.83
VRK1-203ENST00000555067 CCL17Q92583 94 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms