RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 ERVFRD-1P60508 538 aa10.17□□□□□ -0.78
SYNE2-214ENST00000554928 ARMCX4Q5H9R4 360 aa10.17□□□□□ -0.78
SYNE2-214ENST00000554928 RBM48Q5RL73 367 aaKnown RBP10.17□□□□□ -0.78
SYNE2-214ENST00000554928 LIPKQ5VXJ0 399 aa10.17□□□□□ -0.78
SYNE2-214ENST00000554928 BRD3OSQ6XYD6 125 aa10.17□□□□□ -0.78
SYNE2-214ENST00000554928 C17orf107Q6ZR85 190 aa10.17□□□□□ -0.78
SYNE2-214ENST00000554928 PRSS48Q7RTY5 328 aa10.17□□□□□ -0.78
SYNE2-214ENST00000554928 PDZD9Q8IXQ8 264 aa10.17□□□□□ -0.78
SYNE2-214ENST00000554928 MKXQ8IYA7 352 aa10.17□□□□□ -0.78
SYNE2-214ENST00000554928 FAM58AQ8N1B3 248 aa10.17□□□□□ -0.78
SYNE2-214ENST00000554928 Q8N7P7 452 aa10.17□□□□□ -0.78
SYNE2-214ENST00000554928 OR4M1Q8NGD0 313 aa10.17□□□□□ -0.78
SYNE2-214ENST00000554928 OR10K1Q8NGX5 313 aa10.17□□□□□ -0.78
SYNE2-214ENST00000554928 C8orf46Q8TAG6 207 aa10.17□□□□□ -0.78
SYNE2-214ENST00000554928 CYYR1Q96J86 154 aa10.17□□□□□ -0.78
SYNE2-214ENST00000554928 ZNF48Q96MX3 618 aaPredicted RBP10.17□□□□□ -0.78
SYNE2-214ENST00000554928 WDFY2Q96P53 400 aa10.17□□□□□ -0.78
SYNE2-214ENST00000554928 TMED9Q9BVK6 235 aa10.17□□□□□ -0.78
SYNE2-214ENST00000554928 HMG20AQ9NP66 347 aa10.17□□□□□ -0.78
SYNE2-214ENST00000554928 NOX4Q9NPH5 578 aa10.17□□□□□ -0.78
SYNE2-214ENST00000554928 ONECUT1Q9UBC0 465 aa10.17□□□□□ -0.78
SYNE2-214ENST00000554928 MDFIC2A0A1B0GVS7 189 aa10.16□□□□□ -0.78
SYNE2-214ENST00000554928 PSPNO60542 156 aa10.16□□□□□ -0.78
SYNE2-214ENST00000554928 CDRT1O95170 752 aa10.16□□□□□ -0.78
SYNE2-214ENST00000554928 ECDO95905 644 aaPredicted RBP10.16□□□□□ -0.78
SYNE2-214ENST00000554928 HAND1O96004 215 aa10.16□□□□□ -0.78
SYNE2-214ENST00000554928 CD2P06729 351 aa10.16□□□□□ -0.78
SYNE2-214ENST00000554928 HSMCR30P0CW71 290 aa10.16□□□□□ -0.78
SYNE2-214ENST00000554928 RPS25P62851 125 aaKnown RBP10.16□□□□□ -0.78
SYNE2-214ENST00000554928 BDH1Q02338 343 aa10.16□□□□□ -0.78
SYNE2-214ENST00000554928 KLRD1Q13241 179 aa10.16□□□□□ -0.78
SYNE2-214ENST00000554928 TUSC1Q2TAM9 212 aa10.16□□□□□ -0.78
SYNE2-214ENST00000554928 KRTAP24-1Q3LI83 254 aa10.16□□□□□ -0.78
SYNE2-214ENST00000554928 DDI2Q5TDH0 399 aa10.16□□□□□ -0.78
SYNE2-214ENST00000554928 METAP1DQ6UB28 335 aaPredicted RBP10.16□□□□□ -0.78
SYNE2-214ENST00000554928 UNQ9370/PRO34162Q6UXP9 181 aa10.16□□□□□ -0.78
SYNE2-214ENST00000554928 TCF23Q7RTU1 214 aa10.16□□□□□ -0.78
SYNE2-214ENST00000554928 FAM185AQ8N0U4 392 aa10.16□□□□□ -0.78
SYNE2-214ENST00000554928 ASCC1Q8N9N2 400 aaKnown RBP10.16□□□□□ -0.78
SYNE2-214ENST00000554928 PNLDC1Q8NA58 520 aaKnown RBP10.16□□□□□ -0.78
SYNE2-214ENST00000554928 TNFAIP8L1Q8WVP5 186 aa10.16□□□□□ -0.78
SYNE2-214ENST00000554928 TMEM203Q969S6 136 aa10.16□□□□□ -0.78
SYNE2-214ENST00000554928 CHST6Q9GZX3 395 aa10.16□□□□□ -0.78
SYNE2-214ENST00000554928 CNTD2Q9H8S5 307 aa10.16□□□□□ -0.78
SYNE2-214ENST00000554928 SIRT7Q9NRC8 400 aa10.16□□□□□ -0.78
SYNE2-214ENST00000554928 NUP50Q9UKX7 468 aa10.16□□□□□ -0.78
SYNE2-214ENST00000554928 GSTK1Q9Y2Q3 226 aa10.16□□□□□ -0.78
SYNE2-214ENST00000554928 ATRQ13535 2644 aa10.15□□□□□ -0.78
SYNE2-214ENST00000554928 CENPVL3A0A0U1RRI6 287 aa10.15□□□□□ -0.78
SYNE2-214ENST00000554928 A0A1W2PP11 408 aa10.15□□□□□ -0.78
SYNE2-214ENST00000554928 K7N7A8 449 aa10.15□□□□□ -0.78
SYNE2-214ENST00000554928 SIRPB1O00241 398 aa10.15□□□□□ -0.78
SYNE2-214ENST00000554928 RRP9O43818 475 aaKnown RBP10.15□□□□□ -0.78
SYNE2-214ENST00000554928 GPX5O75715 221 aa10.15□□□□□ -0.78
SYNE2-214ENST00000554928 TOX4O94842 621 aa10.15□□□□□ -0.78
SYNE2-214ENST00000554928 IFNA2P01563 188 aa10.15□□□□□ -0.78
SYNE2-214ENST00000554928 TK1P04183 234 aa10.15□□□□□ -0.78
SYNE2-214ENST00000554928 MAS1P04201 325 aa10.15□□□□□ -0.78
SYNE2-214ENST00000554928 ALDOBP05062 364 aa10.15□□□□□ -0.78
SYNE2-214ENST00000554928 CCL3L1P16619 93 aa10.15□□□□□ -0.78
SYNE2-214ENST00000554928 FSTP19883 344 aa10.15□□□□□ -0.78
SYNE2-214ENST00000554928 EEF1B2P24534 225 aaKnown RBP10.15□□□□□ -0.78
SYNE2-214ENST00000554928 BDKRB2P30411 391 aa10.15□□□□□ -0.78
SYNE2-214ENST00000554928 TGFBR2P37173 567 aa10.15□□□□□ -0.78
SYNE2-214ENST00000554928 PPP3R1P63098 170 aa10.15□□□□□ -0.78
SYNE2-214ENST00000554928 ZNF273Q14593 569 aa10.15□□□□□ -0.78
SYNE2-214ENST00000554928 ACSM3Q53FZ2 586 aa10.15□□□□□ -0.78
SYNE2-214ENST00000554928 Q6P435 159 aa10.15□□□□□ -0.78
SYNE2-214ENST00000554928 TMEM91Q6ZNR0 172 aa10.15□□□□□ -0.78
SYNE2-214ENST00000554928 VMO1Q7Z5L0 202 aa10.15□□□□□ -0.78
SYNE2-214ENST00000554928 LYPD6Q86Y78 171 aa10.15□□□□□ -0.78
SYNE2-214ENST00000554928 PNKDQ8N490 385 aa10.15□□□□□ -0.78
SYNE2-214ENST00000554928 ZNF561Q8N587 486 aa10.15□□□□□ -0.78
SYNE2-214ENST00000554928 TPRX1Q8N7U7 411 aa10.15□□□□□ -0.78
SYNE2-214ENST00000554928 OR4S1Q8NGB4 309 aa10.15□□□□□ -0.78
SYNE2-214ENST00000554928 LHX4Q969G2 390 aa10.15□□□□□ -0.78
SYNE2-214ENST00000554928 GPER1Q99527 375 aa10.15□□□□□ -0.78
SYNE2-214ENST00000554928 FAM192AQ9GZU8 254 aa10.15□□□□□ -0.78
SYNE2-214ENST00000554928 TMEM138Q9NPI0 162 aa10.15□□□□□ -0.78
SYNE2-214ENST00000554928 ESM1Q9NQ30 184 aa10.15□□□□□ -0.78
SYNE2-214ENST00000554928 SF3B6Q9Y3B4 125 aaKnown RBP10.15□□□□□ -0.78
SYNE2-214ENST00000554928 A0A1W2PQ09 198 aa10.14□□□□□ -0.79
SYNE2-214ENST00000554928 A0A1W2PRD5 423 aa10.14□□□□□ -0.79
SYNE2-214ENST00000554928 A0A1W2PRF3 423 aa10.14□□□□□ -0.79
SYNE2-214ENST00000554928 A0A1W2PRM7 423 aa10.14□□□□□ -0.79
SYNE2-214ENST00000554928 OR2H2O95918 312 aa10.14□□□□□ -0.79
SYNE2-214ENST00000554928 CYB5AP00167 134 aa10.14□□□□□ -0.79
SYNE2-214ENST00000554928 LIPFP07098 398 aa10.14□□□□□ -0.79
SYNE2-214ENST00000554928 CHRM2P08172 466 aa10.14□□□□□ -0.79
SYNE2-214ENST00000554928 ZNF93P35789 620 aaPredicted RBP10.14□□□□□ -0.79
SYNE2-214ENST00000554928 PTGFRP43088 359 aa10.14□□□□□ -0.79
SYNE2-214ENST00000554928 OR3A1P47881 315 aa10.14□□□□□ -0.79
SYNE2-214ENST00000554928 TPBGQ13641 420 aa10.14□□□□□ -0.79
SYNE2-214ENST00000554928 EDDM3AQ14507 147 aa10.14□□□□□ -0.79
SYNE2-214ENST00000554928 ZNF146Q15072 292 aa10.14□□□□□ -0.79
SYNE2-214ENST00000554928 SSX1Q16384 188 aa10.14□□□□□ -0.79
SYNE2-214ENST00000554928 PIGYQ3MUY2 71 aa10.14□□□□□ -0.79
SYNE2-214ENST00000554928 METTL11BQ5VVY1 283 aa10.14□□□□□ -0.79
SYNE2-214ENST00000554928 TMEM200BQ69YZ2 307 aa10.14□□□□□ -0.79
SYNE2-214ENST00000554928 ASCL4Q6XD76 172 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms