RNA–Protein interactions for RNA: ENST00000554913.5

XRCC3-209, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene XRCC3, Length 2,539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-209ENST00000554913 KCNJ16Q9NPI9 418 aa14.41□□□□□ -0.1
XRCC3-209ENST00000554913 IGKV1-12A0A0C4DH73 117 aa14.4□□□□□ -0.1
XRCC3-209ENST00000554913 ST8SIA3O43173 380 aa14.4□□□□□ -0.1
XRCC3-209ENST00000554913 TXNL1O43396 289 aa14.4□□□□□ -0.1
XRCC3-209ENST00000554913 IGKV1D-12P01611 117 aa14.4□□□□□ -0.1
XRCC3-209ENST00000554913 G3V3Y1 287 aa14.4□□□□□ -0.1
XRCC3-209ENST00000554913 PHF1O43189 567 aaPredicted RBP14.4□□□□□ -0.1
XRCC3-209ENST00000554913 PMELP40967 661 aa14.4□□□□□ -0.1
XRCC3-209ENST00000554913 OR1J1Q8NGS3 322 aa14.4□□□□□ -0.1
XRCC3-209ENST00000554913 SPSB1Q96BD6 273 aa14.4□□□□□ -0.1
XRCC3-209ENST00000554913 ULBP2Q9BZM5 246 aa14.4□□□□□ -0.1
XRCC3-209ENST00000554913 WDFY3Q8IZQ1 3526 aa14.39□□□□□ -0.11
XRCC3-209ENST00000554913 IL13RA2Q14627 380 aa14.39□□□□□ -0.11
XRCC3-209ENST00000554913 ZNF385CQ66K41 422 aaPredicted RBP14.39□□□□□ -0.11
XRCC3-209ENST00000554913 MEX3BQ6ZN04 569 aaKnown RBP14.39□□□□□ -0.11
XRCC3-209ENST00000554913 Q6ZPA2 131 aa14.39□□□□□ -0.11
XRCC3-209ENST00000554913 LGI3Q8N145 548 aa14.39□□□□□ -0.11
XRCC3-209ENST00000554913 FBXL14Q8N1E6 418 aa14.39□□□□□ -0.11
XRCC3-209ENST00000554913 ZIC4Q8N9L1 334 aa14.39□□□□□ -0.11
XRCC3-209ENST00000554913 STRAPQ9Y3F4 350 aaKnown RBP14.39□□□□□ -0.11
XRCC3-209ENST00000554913 GPR37O15354 613 aa14.39□□□□□ -0.11
XRCC3-209ENST00000554913 CLN5O75503 358 aa14.39□□□□□ -0.11
XRCC3-209ENST00000554913 RAET1LQ5VY80 246 aa14.39□□□□□ -0.11
XRCC3-209ENST00000554913 SLC35G3Q8N808 338 aa14.39□□□□□ -0.11
XRCC3-209ENST00000554913 ZNF565Q8N9K5 539 aa14.39□□□□□ -0.11
XRCC3-209ENST00000554913 SLC39A7Q92504 469 aa14.39□□□□□ -0.11
XRCC3-209ENST00000554913 TP53RKQ96S44 253 aa14.39□□□□□ -0.11
XRCC3-209ENST00000554913 ABHD14AQ9BUJ0 271 aa14.39□□□□□ -0.11
XRCC3-209ENST00000554913 ANGPTL4Q9BY76 406 aa14.39□□□□□ -0.11
XRCC3-209ENST00000554913 FOXD3Q9UJU5 478 aaPredicted RBP14.39□□□□□ -0.11
XRCC3-209ENST00000554913 PUS1Q9Y606 427 aaKnown RBP eCLIP14.39□□□□□ -0.11
XRCC3-209ENST00000554913 TRAV20A0A0B4J274 112 aa14.38□□□□□ -0.11
XRCC3-209ENST00000554913 K7N7A8 449 aa14.38□□□□□ -0.11
XRCC3-209ENST00000554913 PATE4P0C8F1 98 aa14.38□□□□□ -0.11
XRCC3-209ENST00000554913 CRYGSP22914 178 aa14.38□□□□□ -0.11
XRCC3-209ENST00000554913 RAB5CP51148 216 aa14.38□□□□□ -0.11
XRCC3-209ENST00000554913 CCL20P78556 96 aa14.38□□□□□ -0.11
XRCC3-209ENST00000554913 CLINT1Q14677 625 aa14.38□□□□□ -0.11
XRCC3-209ENST00000554913 RHEBQ15382 184 aa14.38□□□□□ -0.11
XRCC3-209ENST00000554913 ZNF774Q6NX45 483 aa14.38□□□□□ -0.11
XRCC3-209ENST00000554913 PBDC1Q9BVG4 233 aa14.38□□□□□ -0.11
XRCC3-209ENST00000554913 RARRES3Q9UL19 164 aa14.38□□□□□ -0.11
XRCC3-209ENST00000554913 FAM24AA6NFZ4 105 aa14.38□□□□□ -0.11
XRCC3-209ENST00000554913 FKBP2P26885 142 aaKnown RBP14.38□□□□□ -0.11
XRCC3-209ENST00000554913 RBP2P50120 134 aa14.38□□□□□ -0.11
XRCC3-209ENST00000554913 EWSR1Q01844 656 aaKnown RBP eCLIP14.38□□□□□ -0.117e-7■■■□□ 14.6
XRCC3-209ENST00000554913 BORCS8Q96FH0 119 aa14.38□□□□□ -0.11
XRCC3-209ENST00000554913 PRO3102Q9H379 93 aa14.38□□□□□ -0.11
XRCC3-209ENST00000554913 MIOXQ9UGB7 285 aa14.38□□□□□ -0.11
XRCC3-209ENST00000554913 TP53I11O14683 189 aa14.37□□□□□ -0.11
XRCC3-209ENST00000554913 TERTO14746 1132 aaKnown RBP14.37□□□□□ -0.11
XRCC3-209ENST00000554913 EIF1BO60739 113 aaKnown RBP14.37□□□□□ -0.11
XRCC3-209ENST00000554913 LCATP04180 440 aa14.37□□□□□ -0.11
XRCC3-209ENST00000554913 AADACP22760 399 aa14.37□□□□□ -0.11
XRCC3-209ENST00000554913 ITGA3P26006 1051 aa14.37□□□□□ -0.11
XRCC3-209ENST00000554913 FAM209BQ5JX69 171 aa14.37□□□□□ -0.11
XRCC3-209ENST00000554913 FAM27BQ5VT28 67 aa14.37□□□□□ -0.11
XRCC3-209ENST00000554913 MAML2Q8IZL2 1156 aaPredicted RBP14.37□□□□□ -0.11
XRCC3-209ENST00000554913 BATF2Q8N1L9 274 aa14.37□□□□□ -0.11
XRCC3-209ENST00000554913 SUMF1Q8NBK3 374 aa14.37□□□□□ -0.11
XRCC3-209ENST00000554913 OR4D5Q8NGN0 318 aa14.37□□□□□ -0.11
XRCC3-209ENST00000554913 MOB3AQ96BX8 217 aa14.37□□□□□ -0.11
XRCC3-209ENST00000554913 BOD1Q96IK1 185 aa14.37□□□□□ -0.11
XRCC3-209ENST00000554913 JSRP1Q96MG2 331 aaPredicted RBP14.37□□□□□ -0.11
XRCC3-209ENST00000554913 SYT3Q9BQG1 590 aa14.37□□□□□ -0.11
XRCC3-209ENST00000554913 ZMAT5Q9UDW3 170 aaKnown RBP14.37□□□□□ -0.11
XRCC3-209ENST00000554913 NKX2-6A6NCS4 301 aa14.37□□□□□ -0.11
XRCC3-209ENST00000554913 BCAT2O15382 392 aaPredicted RBP14.37□□□□□ -0.11
XRCC3-209ENST00000554913 RPS23P62266 143 aaKnown RBP14.37□□□□□ -0.11
XRCC3-209ENST00000554913 NCMAPQ5T1S8 102 aa14.37□□□□□ -0.11
XRCC3-209ENST00000554913 GUSBP11Q6P575 273 aa14.37□□□□□ -0.11
XRCC3-209ENST00000554913 AKR7LQ8NHP1 331 aa14.37□□□□□ -0.11
XRCC3-209ENST00000554913 ST3GAL6Q9Y274 331 aa14.37□□□□□ -0.11
XRCC3-209ENST00000554913 A0A1W2PQM1 296 aa14.36□□□□□ -0.11
XRCC3-209ENST00000554913 CDRT15L2A8MXV6 281 aa14.36□□□□□ -0.11
XRCC3-209ENST00000554913 AP4M1O00189 453 aa14.36□□□□□ -0.11
XRCC3-209ENST00000554913 TNFSF11O14788 317 aa14.36□□□□□ -0.11
XRCC3-209ENST00000554913 SYNGR3O43761 229 aa14.36□□□□□ -0.11
XRCC3-209ENST00000554913 ZIC3O60481 467 aa14.36□□□□□ -0.11
XRCC3-209ENST00000554913 CCL3P10147 92 aa14.36□□□□□ -0.11
XRCC3-209ENST00000554913 SRFP11831 508 aa14.36□□□□□ -0.11
XRCC3-209ENST00000554913 OMGP23515 440 aa14.36□□□□□ -0.11
XRCC3-209ENST00000554913 GNMTQ14749 295 aa14.36□□□□□ -0.11
XRCC3-209ENST00000554913 CNN3Q15417 329 aaKnown RBP14.36□□□□□ -0.11
XRCC3-209ENST00000554913 TSC22D1Q15714 1073 aa14.36□□□□□ -0.11
XRCC3-209ENST00000554913 SOHLH1Q5JUK2 328 aa14.36□□□□□ -0.11
XRCC3-209ENST00000554913 C5orf24Q7Z6I8 188 aa14.36□□□□□ -0.11
XRCC3-209ENST00000554913 OSR2Q8N2R0 312 aa14.36□□□□□ -0.11
XRCC3-209ENST00000554913 CCDC54Q8NEL0 328 aa14.36□□□□□ -0.11
XRCC3-209ENST00000554913 MALSU1Q96EH3 234 aa14.36□□□□□ -0.11
XRCC3-209ENST00000554913 ZNF286AQ9HBT8 521 aa14.36□□□□□ -0.11
XRCC3-209ENST00000554913 GDF9O60383 454 aa14.36□□□□□ -0.11
XRCC3-209ENST00000554913 ONECUT2O95948 504 aa14.36□□□□□ -0.11
XRCC3-209ENST00000554913 NRASP01111 189 aa14.36□□□□□ -0.11
XRCC3-209ENST00000554913 AFF3P51826 1226 aaKnown RBP14.36□□□□□ -0.11
XRCC3-209ENST00000554913 MRPS34P82930 218 aaKnown RBP14.36□□□□□ -0.11
XRCC3-209ENST00000554913 ASCL4Q6XD76 172 aa14.36□□□□□ -0.11
XRCC3-209ENST00000554913 OR2C3Q8N628 320 aa14.36□□□□□ -0.11
XRCC3-209ENST00000554913 SUMF2Q8NBJ7 301 aa14.36□□□□□ -0.11
XRCC3-209ENST00000554913 SLAMF9Q96A28 289 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms