RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 POLR2IP36954 125 aaKnown RBP3.41□□□□□ -1.86
VTI1B-203ENST00000554636 CFHR2P36980 270 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 COMPP49747 757 aaPredicted RBP3.41□□□□□ -1.86
VTI1B-203ENST00000554636 NPY4RP50391 375 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 ESRRGP62508 458 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 ELF3P78545 371 aaPredicted RBP3.41□□□□□ -1.86
VTI1B-203ENST00000554636 MZT1Q08AG7 82 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 PRDX4Q13162 271 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 PTGES3Q15185 160 aaKnown RBP3.41□□□□□ -1.86
VTI1B-203ENST00000554636 KCNJ8Q15842 424 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 WDR38Q5JTN6 314 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 NXNL2Q5VZ03 156 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 STUMQ69YW2 141 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 DEGS2Q6QHC5 323 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 BTNL3Q6UXE8 466 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 WDR82Q6UXN9 313 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 C9orf139Q6ZV77 190 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 SSX6Q7RTT6 188 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 SLC35F2Q8IXU6 374 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 ZDHHC23Q8IYP9 409 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 FGFRL1Q8N441 504 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 BPIFB2Q8N4F0 458 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 TCEANCQ8N8B7 351 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 CSNK2A3Q8NEV1 391 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 OR10Z1Q8NGY1 313 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 OR8S1Q8NH09 359 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 TMEM163Q8TC26 289 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 FAM216AQ8WUB2 273 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 LRRC29Q8WV35 223 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 TMED6Q8WW62 240 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 RAB40AQ8WXH6 277 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 C22orf15Q8WYQ4 148 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 OR5P3Q8WZ94 311 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 RPL3LQ92901 407 aaKnown RBP3.41□□□□□ -1.86
VTI1B-203ENST00000554636 SEH1LQ96EE3 360 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 PLEKHA8Q96JA3 519 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 TBX15Q96SF7 602 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 CNN2Q99439 309 aaKnown RBP3.41□□□□□ -1.86
VTI1B-203ENST00000554636 TEAD3Q99594 435 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 CIB1Q99828 191 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 MICU1Q9BPX6 476 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 NUDT16L1Q9BRJ7 211 aaKnown RBP3.41□□□□□ -1.86
VTI1B-203ENST00000554636 TEX12Q9BXU0 123 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 GABARAPL3Q9BY60 117 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 PRRG3Q9BZD7 231 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 PBOV1Q9GZY1 135 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 MMADHCQ9H3L0 296 aaPredicted RBP3.41□□□□□ -1.86
VTI1B-203ENST00000554636 NIPAL2Q9H841 368 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 RNPEPL1Q9HAU8 725 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 KRT84Q9NSB2 600 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 HAO2Q9NYQ3 351 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 KAAG1Q9UBP8 84 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 CLN8Q9UBY8 286 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 MRM2Q9UI43 246 aaKnown RBP3.41□□□□□ -1.86
VTI1B-203ENST00000554636 LAMP5Q9UJQ1 280 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 AP4S1Q9Y587 144 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 MPC1Q9Y5U8 109 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 PRKDCP78527 4128 aaKnown RBP3.4□□□□□ -1.86
VTI1B-203ENST00000554636 ZNF816-ZNF321PA0A0X1KG74 233 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 hCG_1807616A0A1W2PRN6 198 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 TMEM210A6NLX4 147 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 ANXA2P2A6NMY6 339 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 ZNF879B4DU55 563 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 CLDN34H7C241 214 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 P2RY10O00398 339 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 DVL1O14640 695 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 CDIPTO14735 213 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 MAGEB4O15481 346 aaPredicted RBP3.4□□□□□ -1.87
VTI1B-203ENST00000554636 NDUFA2O43678 99 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 ZNF254O75437 659 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 CIB2O75838 187 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 DHRS3O75911 302 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 TTRP02766 147 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 TFF1P04155 84 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 SFTPBP07988 381 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 SELLP14151 372 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 CCL1P22362 96 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 HTR1FP30939 366 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 RIDAP52758 137 aaKnown RBP3.4□□□□□ -1.87
VTI1B-203ENST00000554636 ACTR3P61158 418 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 FGF12P61328 243 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 IL5RAQ01344 420 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 SLC9A3R2Q15599 337 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 SNCBQ16143 134 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 ZNF829Q3KNS6 432 aaPredicted RBP3.4□□□□□ -1.87
VTI1B-203ENST00000554636 FAM76BQ5HYJ3 339 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 ZNF684Q5T5D7 378 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 TMEM42Q69YG0 159 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 ZNF322Q6U7Q0 402 aaPredicted RBP3.4□□□□□ -1.87
VTI1B-203ENST00000554636 C12orf54Q6X4T0 127 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 PLEKHG7Q6ZR37 379 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 Q6ZSR3 168 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 KRT77Q7Z794 578 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.4□□□□□ -1.87
VTI1B-203ENST00000554636 GID4Q8IVV7 300 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 ZNF679Q8IYX0 411 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 FTMTQ8N4E7 242 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 FAM216BQ8N7L0 139 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 OR51E1Q8TCB6 317 aa3.4□□□□□ -1.87
VTI1B-203ENST00000554636 PYDC1Q8WXC3 89 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms