RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 NDUFB11Q9NX14 153 aa6.38□□□□□ -1.39
ABCD4-220ENST00000553998 MIOXQ9UGB7 285 aa6.38□□□□□ -1.39
ABCD4-220ENST00000553998 FOXJ3Q9UPW0 622 aa6.38□□□□□ -1.39
ABCD4-220ENST00000553998 POLDIP2Q9Y2S7 368 aa6.38□□□□□ -1.39
ABCD4-220ENST00000553998 SF3B6Q9Y3B4 125 aaKnown RBP6.38□□□□□ -1.39
ABCD4-220ENST00000553998 EPPK1P58107 5090 aaKnown RBP6.37□□□□□ -1.39
ABCD4-220ENST00000553998 RYR2Q92736 4967 aa6.37□□□□□ -1.39
ABCD4-220ENST00000553998 IGHV3-64DA0A0J9YX35 117 aa6.37□□□□□ -1.39
ABCD4-220ENST00000553998 FAM230AA0A1W2PPH8 454 aa6.37□□□□□ -1.39
ABCD4-220ENST00000553998 hCG_1807616A0A1W2PRN6 198 aa6.37□□□□□ -1.39
ABCD4-220ENST00000553998 MEGF11A6BM72 1044 aa6.37□□□□□ -1.39
ABCD4-220ENST00000553998 MAGEA13PA6NCF6 341 aa6.37□□□□□ -1.39
ABCD4-220ENST00000553998 LGALS8O00214 317 aa6.37□□□□□ -1.39
ABCD4-220ENST00000553998 CDIPTO14735 213 aa6.37□□□□□ -1.39
ABCD4-220ENST00000553998 NOS1APO75052 506 aaPredicted RBP6.37□□□□□ -1.39
ABCD4-220ENST00000553998 ARL6IP5O75915 188 aa6.37□□□□□ -1.39
ABCD4-220ENST00000553998 TSPAN9O75954 239 aa6.37□□□□□ -1.39
ABCD4-220ENST00000553998 LHBP01229 141 aa6.37□□□□□ -1.39
ABCD4-220ENST00000553998 OPN1MWP04001 364 aa6.37□□□□□ -1.39
ABCD4-220ENST00000553998 UCHL1P09936 223 aa6.37□□□□□ -1.39
ABCD4-220ENST00000553998 OPN1MW2P0DN77 364 aa6.37□□□□□ -1.39
ABCD4-220ENST00000553998 OPN1MW3P0DN78 364 aa6.37□□□□□ -1.39
ABCD4-220ENST00000553998 MMP9P14780 707 aa6.37□□□□□ -1.39
ABCD4-220ENST00000553998 IGFBP3P17936 291 aaPredicted RBP6.37□□□□□ -1.39
ABCD4-220ENST00000553998 BDKRB2P30411 391 aa6.37□□□□□ -1.39
ABCD4-220ENST00000553998 TGFBR2P37173 567 aa6.37□□□□□ -1.39
ABCD4-220ENST00000553998 RBMXP38159 391 aaKnown RBP6.37□□□□□ -1.39
ABCD4-220ENST00000553998 HAAOP46952 286 aa6.37□□□□□ -1.39
ABCD4-220ENST00000553998 MTCP1P56278 107 aa6.37□□□□□ -1.39
ABCD4-220ENST00000553998 RPS25P62851 125 aaKnown RBP6.37□□□□□ -1.39
ABCD4-220ENST00000553998 IL24Q13007 206 aa6.37□□□□□ -1.39
ABCD4-220ENST00000553998 KCNJ8Q15842 424 aa6.37□□□□□ -1.39
ABCD4-220ENST00000553998 NEDD8Q15843 81 aa6.37□□□□□ -1.39
ABCD4-220ENST00000553998 GPR157Q5UAW9 335 aa6.37□□□□□ -1.39
ABCD4-220ENST00000553998 HAGHLQ6PII5 290 aaPredicted RBP6.37□□□□□ -1.39
ABCD4-220ENST00000553998 WDR82Q6UXN9 313 aa6.37□□□□□ -1.39
ABCD4-220ENST00000553998 ZNF841Q6ZN19 808 aa6.37□□□□□ -1.39
ABCD4-220ENST00000553998 CEACAM19Q7Z692 300 aa6.37□□□□□ -1.39
ABCD4-220ENST00000553998 NKAIN3Q8N8D7 197 aa6.37□□□□□ -1.39
ABCD4-220ENST00000553998 SCCPDHQ8NBX0 429 aa6.37□□□□□ -1.39
ABCD4-220ENST00000553998 ZNF420Q8TAQ5 688 aaPredicted RBP6.37□□□□□ -1.39
ABCD4-220ENST00000553998 TBC1D15Q8TC07 691 aa6.37□□□□□ -1.39
ABCD4-220ENST00000553998 RPL3LQ92901 407 aaKnown RBP6.37□□□□□ -1.39
ABCD4-220ENST00000553998 TMEM203Q969S6 136 aa6.37□□□□□ -1.39
ABCD4-220ENST00000553998 C12orf43Q96C57 262 aaKnown RBP6.37□□□□□ -1.39
ABCD4-220ENST00000553998 NUDT16L1Q9BRJ7 211 aaKnown RBP6.37□□□□□ -1.39
ABCD4-220ENST00000553998 MRPS26Q9BYN8 205 aaKnown RBP6.37□□□□□ -1.39
ABCD4-220ENST00000553998 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.37□□□□□ -1.39
ABCD4-220ENST00000553998 RASL12Q9NYN1 266 aa6.37□□□□□ -1.39
ABCD4-220ENST00000553998 TAS2R4Q9NYW5 299 aa6.37□□□□□ -1.39
ABCD4-220ENST00000553998 IGKV1-27A0A075B6S5 117 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 TRAV38-1A0A0B4J264 116 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 CENPVL3A0A0U1RRI6 287 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 TRDV1A0A1B0GX56 115 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 GABRPO00591 440 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 NDUFA2O43678 99 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 GPR137BO60478 399 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 CYB5AP00167 134 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 CYB5R3P00387 301 aaPredicted RBP6.36□□□□□ -1.39
ABCD4-220ENST00000553998 HCKP08631 526 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 CSF1P09603 554 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 PGA5P0DJD9 388 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 SMIM18P0DKX4 95 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 MUC1P15941 1255 aaPredicted RBP6.36□□□□□ -1.39
ABCD4-220ENST00000553998 FGF9P31371 208 aaPredicted RBP6.36□□□□□ -1.39
ABCD4-220ENST00000553998 RANBP1P43487 201 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 IER3P46695 156 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 GP2P55259 537 aaKnown RBP6.36□□□□□ -1.39
ABCD4-220ENST00000553998 LOXL3P58215 753 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 FGF12P61328 243 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 GNB2P62879 340 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 FABP5Q01469 135 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 TIMM50Q3ZCQ8 353 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 ZNF404Q494X3 552 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 HSD17B12Q53GQ0 312 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 VAX1Q5SQQ9 334 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 TEX36Q5VZQ5 186 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 TMEM91Q6ZNR0 172 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 GDPGP1Q6ZNW5 385 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 Q6ZSV7 163 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 ZNF826PQ6ZT77 177 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 LDLRAD3Q86YD5 345 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 FAM90A1Q86YD7 464 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 MKXQ8IYA7 352 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 Q8IYB0 196 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 SAXO1Q8IYX7 474 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 GCSAMQ8N6F7 178 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 POC1AQ8NBT0 407 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 OR51A2Q8NGJ7 313 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 TRMT10AQ8TBZ6 339 aaKnown RBP6.36□□□□□ -1.39
ABCD4-220ENST00000553998 NPRL2Q8WTW4 380 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 LRRC29Q8WV35 223 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 NEIL1Q96FI4 390 aaPredicted RBP6.36□□□□□ -1.39
ABCD4-220ENST00000553998 TMEM246Q9BRR3 403 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 RHOFQ9HBH0 211 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 TNFRSF19Q9NS68 423 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 SNTG1Q9NSN8 517 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 STUB1Q9UNE7 303 aa6.36□□□□□ -1.39
ABCD4-220ENST00000553998 TRAV8-7A0A075B6U6 113 aa6.35□□□□□ -1.39
ABCD4-220ENST00000553998 OOEPA6NGQ2 149 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms