RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 RPEQ96AT9 228 aa10.72□□□□□ -0.69
PRPF39-204ENST00000553605 TLCD1Q96CP7 247 aa10.72□□□□□ -0.69
PRPF39-204ENST00000553605 HRASLS5Q96KN8 279 aa10.72□□□□□ -0.69
PRPF39-204ENST00000553605 GAL3ST2Q9H3Q3 398 aa10.72□□□□□ -0.69
PRPF39-204ENST00000553605 PCDHB16Q9NRJ7 776 aa10.72□□□□□ -0.69
PRPF39-204ENST00000553605 ENPP5Q9UJA9 477 aa10.72□□□□□ -0.69
PRPF39-204ENST00000553605 AP3M1Q9Y2T2 418 aa10.72□□□□□ -0.69
PRPF39-204ENST00000553605 CDH10Q9Y6N8 788 aa10.72□□□□□ -0.69
PRPF39-204ENST00000553605 A0A0U1RQV5 110 aa10.71□□□□□ -0.69
PRPF39-204ENST00000553605 F8VVB4 439 aa10.71□□□□□ -0.69
PRPF39-204ENST00000553605 F8VWA3 439 aa10.71□□□□□ -0.69
PRPF39-204ENST00000553605 IGHG4P01861 327 aa10.71□□□□□ -0.69
PRPF39-204ENST00000553605 IGHA1P01876 353 aa10.71□□□□□ -0.69
PRPF39-204ENST00000553605 LYNP07948 512 aa10.71□□□□□ -0.69
PRPF39-204ENST00000553605 H2AFXP16104 143 aaPredicted RBP10.71□□□□□ -0.69
PRPF39-204ENST00000553605 GABRR1P24046 479 aa10.71□□□□□ -0.69
PRPF39-204ENST00000553605 GSTT1P30711 240 aa10.71□□□□□ -0.69
PRPF39-204ENST00000553605 GDNFP39905 211 aa10.71□□□□□ -0.69
PRPF39-204ENST00000553605 GABPB1Q06547 395 aaPredicted RBP10.71□□□□□ -0.69
PRPF39-204ENST00000553605 HAGHQ16775 308 aa10.71□□□□□ -0.69
PRPF39-204ENST00000553605 KIAA1109Q2LD37 5005 aa10.71□□□□□ -0.69
PRPF39-204ENST00000553605 SLX4IPQ5VYV7 408 aa10.71□□□□□ -0.69
PRPF39-204ENST00000553605 TRPM8Q7Z2W7 1104 aa10.71□□□□□ -0.69
PRPF39-204ENST00000553605 LYPD6Q86Y78 171 aa10.71□□□□□ -0.69
PRPF39-204ENST00000553605 SGPP2Q8IWX5 399 aa10.71□□□□□ -0.69
PRPF39-204ENST00000553605 RP9Q8TA86 221 aaKnown RBP10.71□□□□□ -0.69
PRPF39-204ENST00000553605 GATAD1Q8WUU5 269 aa10.71□□□□□ -0.69
PRPF39-204ENST00000553605 TOMM40LQ969M1 308 aa10.71□□□□□ -0.69
PRPF39-204ENST00000553605 ABCG5Q9H222 651 aa10.71□□□□□ -0.69
PRPF39-204ENST00000553605 GHITMQ9H3K2 345 aa10.71□□□□□ -0.69
PRPF39-204ENST00000553605 TRGV10A0A0A0MS01 117 aa10.7□□□□□ -0.7
PRPF39-204ENST00000553605 MGST3O14880 152 aa10.7□□□□□ -0.7
PRPF39-204ENST00000553605 ERP29P30040 261 aaKnown RBP10.7□□□□□ -0.7
PRPF39-204ENST00000553605 NUDT2P50583 147 aa10.7□□□□□ -0.7
PRPF39-204ENST00000553605 P2RX3P56373 397 aa10.7□□□□□ -0.7
PRPF39-204ENST00000553605 IL24Q13007 206 aa10.7□□□□□ -0.7
PRPF39-204ENST00000553605 KPNB1Q14974 876 aaKnown RBP10.7□□□□□ -0.7
PRPF39-204ENST00000553605 SLC15A3Q8IY34 581 aa10.7□□□□□ -0.7
PRPF39-204ENST00000553605 PKIBQ9C010 78 aa10.7□□□□□ -0.7
PRPF39-204ENST00000553605 GPR84Q9NQS5 396 aa10.7□□□□□ -0.7
PRPF39-204ENST00000553605 GPR173Q9NS66 373 aa10.7□□□□□ -0.7
PRPF39-204ENST00000553605 IL20Q9NYY1 176 aa10.7□□□□□ -0.7
PRPF39-204ENST00000553605 DNAJB9Q9UBS3 223 aa10.7□□□□□ -0.7
PRPF39-204ENST00000553605 GLS2Q9UI32 602 aa10.7□□□□□ -0.7
PRPF39-204ENST00000553605 A0A1W2PPI3 338 aa10.69□□□□□ -0.7
PRPF39-204ENST00000553605 NCBP2LA6PVI3 153 aaKnown RBP10.69□□□□□ -0.7
PRPF39-204ENST00000553605 I3L521 148 aa10.69□□□□□ -0.7
PRPF39-204ENST00000553605 RRP9O43818 475 aaKnown RBP10.69□□□□□ -0.7
PRPF39-204ENST00000553605 PSPNO60542 156 aa10.69□□□□□ -0.7
PRPF39-204ENST00000553605 HAND1O96004 215 aa10.69□□□□□ -0.7
PRPF39-204ENST00000553605 IGKV1D-33P01593 117 aa10.69□□□□□ -0.7
PRPF39-204ENST00000553605 IGKV1-33P01594 117 aa10.69□□□□□ -0.7
PRPF39-204ENST00000553605 NCK1P16333 377 aa10.69□□□□□ -0.7
PRPF39-204ENST00000553605 PSMB8P28062 276 aa10.69□□□□□ -0.7
PRPF39-204ENST00000553605 CFHR3Q02985 330 aa10.69□□□□□ -0.7
PRPF39-204ENST00000553605 CLVS2Q5SYC1 327 aa10.69□□□□□ -0.7
PRPF39-204ENST00000553605 TGIF2LXQ8IUE1 241 aa10.69□□□□□ -0.7
PRPF39-204ENST00000553605 OR8D4Q8NGM9 314 aa10.69□□□□□ -0.7
PRPF39-204ENST00000553605 OTOSQ8NHW6 89 aa10.69□□□□□ -0.7
PRPF39-204ENST00000553605 OR51E1Q8TCB6 317 aa10.69□□□□□ -0.7
PRPF39-204ENST00000553605 CORO2AQ92828 525 aa10.69□□□□□ -0.7
PRPF39-204ENST00000553605 EME1Q96AY2 570 aa10.69□□□□□ -0.7
PRPF39-204ENST00000553605 CEP19Q96LK0 163 aa10.69□□□□□ -0.7
PRPF39-204ENST00000553605 UBE2E2Q96LR5 201 aa10.69□□□□□ -0.7
PRPF39-204ENST00000553605 GNB4Q9HAV0 340 aa10.69□□□□□ -0.7
PRPF39-204ENST00000553605 TAS2R3Q9NYW6 316 aa10.69□□□□□ -0.7
PRPF39-204ENST00000553605 MTCH1Q9NZJ7 389 aa10.69□□□□□ -0.7
PRPF39-204ENST00000553605 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.69□□□□□ -0.7
PRPF39-204ENST00000553605 SLC7A11Q9UPY5 501 aa10.69□□□□□ -0.7
PRPF39-204ENST00000553605 HECTD4Q9Y4D8 3996 aa10.69□□□□□ -0.7
PRPF39-204ENST00000553605 A0A087X0M5 115 aa10.68□□□□□ -0.7
PRPF39-204ENST00000553605 A0A0G2JND7 137 aa10.68□□□□□ -0.7
PRPF39-204ENST00000553605 A0A1B0GX30 115 aa10.68□□□□□ -0.7
PRPF39-204ENST00000553605 MAGEA13PA6NCF6 341 aa10.68□□□□□ -0.7
PRPF39-204ENST00000553605 ACOD1A6NK06 481 aa10.68□□□□□ -0.7
PRPF39-204ENST00000553605 DLGAP1O14490 977 aa10.68□□□□□ -0.7
PRPF39-204ENST00000553605 INMTO95050 263 aa10.68□□□□□ -0.7
PRPF39-204ENST00000553605 VDAC1P21796 283 aa10.68□□□□□ -0.7
PRPF39-204ENST00000553605 CNTFRP26992 372 aa10.68□□□□□ -0.7
PRPF39-204ENST00000553605 ISL1P61371 349 aa10.68□□□□□ -0.7
PRPF39-204ENST00000553605 GNB1P62873 340 aa10.68□□□□□ -0.7
PRPF39-204ENST00000553605 RUNX1Q01196 453 aa10.68□□□□□ -0.7
PRPF39-204ENST00000553605 KLF10Q13118 480 aa10.68□□□□□ -0.7
PRPF39-204ENST00000553605 MAPRE2Q15555 327 aa10.68□□□□□ -0.7
PRPF39-204ENST00000553605 UTF1Q5T230 341 aa10.68□□□□□ -0.7
PRPF39-204ENST00000553605 ARPINQ7Z6K5 226 aa10.68□□□□□ -0.7
PRPF39-204ENST00000553605 RNF148Q8N7C7 305 aa10.68□□□□□ -0.7
PRPF39-204ENST00000553605 OR4D6Q8NGJ1 314 aa10.68□□□□□ -0.7
PRPF39-204ENST00000553605 OR9G1Q8NH87 305 aa10.68□□□□□ -0.7
PRPF39-204ENST00000553605 DLX4Q92988 240 aaPredicted RBP10.68□□□□□ -0.7
PRPF39-204ENST00000553605 OR5B12Q96R08 314 aa10.68□□□□□ -0.7
PRPF39-204ENST00000553605 TEAD3Q99594 435 aa10.68□□□□□ -0.7
PRPF39-204ENST00000553605 TSSK6Q9BXA6 273 aa10.68□□□□□ -0.7
PRPF39-204ENST00000553605 PARD6BQ9BYG5 372 aa10.68□□□□□ -0.7
PRPF39-204ENST00000553605 MED20Q9H944 212 aa10.68□□□□□ -0.7
PRPF39-204ENST00000553605 SEBOXQ9HB31 216 aaPredicted RBP10.68□□□□□ -0.7
PRPF39-204ENST00000553605 LIN7CQ9NUP9 197 aaKnown RBP10.68□□□□□ -0.7
PRPF39-204ENST00000553605 AMMECR1Q9Y4X0 333 aaPredicted RBP10.68□□□□□ -0.7
PRPF39-204ENST00000553605 KMT2AQ03164 3969 aa10.67□□□□□ -0.7
PRPF39-204ENST00000553605 TMEM269A0A1B0GVZ9 245 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms