RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 POLR3KQ9Y2Y1 108 aaPredicted RBP12.34□□□□□ -0.43
MTHFD1-204ENST00000553405 V9GY05 133 aa12.34□□□□□ -0.43
MTHFD1-204ENST00000553405 TMEM82A0PJX8 343 aa12.33□□□□□ -0.44
MTHFD1-204ENST00000553405 IFITM5A6NNB3 132 aa12.33□□□□□ -0.44
MTHFD1-204ENST00000553405 ADAM20O43506 726 aa12.33□□□□□ -0.44
MTHFD1-204ENST00000553405 CYB5AP00167 134 aa12.33□□□□□ -0.44
MTHFD1-204ENST00000553405 VSIG8P0DPA2 414 aa12.33□□□□□ -0.44
MTHFD1-204ENST00000553405 FOSL1P15407 271 aa12.33□□□□□ -0.44
MTHFD1-204ENST00000553405 RPS2P15880 293 aaKnown RBP12.33□□□□□ -0.44
MTHFD1-204ENST00000553405 PRKACAP17612 351 aa12.33□□□□□ -0.44
MTHFD1-204ENST00000553405 RAB3BP20337 219 aa12.33□□□□□ -0.44
MTHFD1-204ENST00000553405 MYL9P24844 172 aa12.33□□□□□ -0.44
MTHFD1-204ENST00000553405 HTR2CP28335 458 aa12.33□□□□□ -0.44
MTHFD1-204ENST00000553405 PRDX2P32119 198 aa12.33□□□□□ -0.44
MTHFD1-204ENST00000553405 CAV3P56539 151 aa12.33□□□□□ -0.44
MTHFD1-204ENST00000553405 KCNJ8Q15842 424 aa12.33□□□□□ -0.44
MTHFD1-204ENST00000553405 SPIN3Q5JUX0 258 aa12.33□□□□□ -0.44
MTHFD1-204ENST00000553405 GPR107Q5VW38 600 aa12.33□□□□□ -0.44
MTHFD1-204ENST00000553405 WDR25Q64LD2 544 aaPredicted RBP12.33□□□□□ -0.44
MTHFD1-204ENST00000553405 GPR141Q7Z602 305 aa12.33□□□□□ -0.44
MTHFD1-204ENST00000553405 PNLDC1Q8NA58 520 aaKnown RBP12.33□□□□□ -0.44
MTHFD1-204ENST00000553405 MSI2Q96DH6 328 aaKnown RBP12.33□□□□□ -0.44
MTHFD1-204ENST00000553405 NEIL1Q96FI4 390 aaPredicted RBP12.33□□□□□ -0.44
MTHFD1-204ENST00000553405 FAM192AQ9GZU8 254 aa12.33□□□□□ -0.44
MTHFD1-204ENST00000553405 METTL9Q9H1A3 318 aa12.33□□□□□ -0.44
MTHFD1-204ENST00000553405 FBLN5Q9UBX5 448 aa12.33□□□□□ -0.44
MTHFD1-204ENST00000553405 ING4Q9UNL4 249 aa12.33□□□□□ -0.44
MTHFD1-204ENST00000553405 SMIM30A4D0T7 59 aa12.32□□□□□ -0.44
MTHFD1-204ENST00000553405 TMEM14DPA8MWL7 114 aa12.32□□□□□ -0.44
MTHFD1-204ENST00000553405 AIPO00170 330 aa12.32□□□□□ -0.44
MTHFD1-204ENST00000553405 PDCD5O14737 125 aa12.32□□□□□ -0.44
MTHFD1-204ENST00000553405 SMAD7O15105 426 aaKnown RBP12.32□□□□□ -0.44
MTHFD1-204ENST00000553405 ZNF780AO75290 641 aaPredicted RBP12.32□□□□□ -0.44
MTHFD1-204ENST00000553405 INHBBP09529 407 aa12.32□□□□□ -0.44
MTHFD1-204ENST00000553405 LMO1P25800 156 aa12.32□□□□□ -0.44
MTHFD1-204ENST00000553405 DUSP1P28562 367 aa12.32□□□□□ -0.44
MTHFD1-204ENST00000553405 PSMD7P51665 324 aa12.32□□□□□ -0.44
MTHFD1-204ENST00000553405 CLDN12P56749 244 aa12.32□□□□□ -0.44
MTHFD1-204ENST00000553405 LSM3P62310 102 aaKnown RBP12.32□□□□□ -0.44
MTHFD1-204ENST00000553405 RSU1Q15404 277 aa12.32□□□□□ -0.44
MTHFD1-204ENST00000553405 PIGYQ3MUY2 71 aa12.32□□□□□ -0.44
MTHFD1-204ENST00000553405 SLC22A6Q4U2R8 563 aa12.32□□□□□ -0.44
MTHFD1-204ENST00000553405 AWAT2Q6E213 333 aa12.32□□□□□ -0.44
MTHFD1-204ENST00000553405 OR10K2Q6IF99 312 aa12.32□□□□□ -0.44
MTHFD1-204ENST00000553405 C17orf107Q6ZR85 190 aa12.32□□□□□ -0.44
MTHFD1-204ENST00000553405 RAB39BQ96DA2 213 aa12.32□□□□□ -0.44
MTHFD1-204ENST00000553405 CYYR1Q96J86 154 aa12.32□□□□□ -0.44
MTHFD1-204ENST00000553405 SHARPINQ9H0F6 387 aa12.32□□□□□ -0.44
MTHFD1-204ENST00000553405 RBM38Q9H0Z9 239 aaKnown RBP12.32□□□□□ -0.44
MTHFD1-204ENST00000553405 GHRLQ9UBU3 117 aa12.32□□□□□ -0.44
MTHFD1-204ENST00000553405 DOCK11Q5JSL3 2073 aa12.32□□□□□ -0.44
MTHFD1-204ENST00000553405 SONP18583 2426 aaKnown RBP12.31□□□□□ -0.44
MTHFD1-204ENST00000553405 NOTOA8MTQ0 251 aa12.31□□□□□ -0.44
MTHFD1-204ENST00000553405 C22orf46C9J442 243 aa12.31□□□□□ -0.44
MTHFD1-204ENST00000553405 DVL1O14640 695 aa12.31□□□□□ -0.44
MTHFD1-204ENST00000553405 TMPRSS2O15393 492 aa12.31□□□□□ -0.44
MTHFD1-204ENST00000553405 HTR3BO95264 441 aa12.31□□□□□ -0.44
MTHFD1-204ENST00000553405 BPNT1O95861 308 aa12.31□□□□□ -0.44
MTHFD1-204ENST00000553405 HAND1O96004 215 aa12.31□□□□□ -0.44
MTHFD1-204ENST00000553405 UBBP0CG47 229 aa12.31□□□□□ -0.44
MTHFD1-204ENST00000553405 CD99P14209 185 aa12.31□□□□□ -0.44
MTHFD1-204ENST00000553405 SERPINA2P20848 420 aa12.31□□□□□ -0.44
MTHFD1-204ENST00000553405 RPS19P39019 145 aaKnown RBP12.31□□□□□ -0.44
MTHFD1-204ENST00000553405 PITPNBP48739 271 aa12.31□□□□□ -0.44
MTHFD1-204ENST00000553405 BMXP51813 675 aa12.31□□□□□ -0.44
MTHFD1-204ENST00000553405 RBM11P57052 281 aaKnown RBP12.31□□□□□ -0.44
MTHFD1-204ENST00000553405 VBP1P61758 197 aa12.31□□□□□ -0.44
MTHFD1-204ENST00000553405 IL13RA1P78552 427 aa12.31□□□□□ -0.44
MTHFD1-204ENST00000553405 PLA2G7Q13093 441 aa12.31□□□□□ -0.44
MTHFD1-204ENST00000553405 IL13RA2Q14627 380 aa12.31□□□□□ -0.44
MTHFD1-204ENST00000553405 P2RY14Q15391 338 aa12.31□□□□□ -0.44
MTHFD1-204ENST00000553405 RAB11BQ15907 218 aa12.31□□□□□ -0.44
MTHFD1-204ENST00000553405 BIVMQ86UB2 503 aa12.31□□□□□ -0.44
MTHFD1-204ENST00000553405 ZNRF1Q8ND25 227 aa12.31□□□□□ -0.44
MTHFD1-204ENST00000553405 Q96M66 194 aa12.31□□□□□ -0.44
MTHFD1-204ENST00000553405 SMR3AQ99954 134 aa12.31□□□□□ -0.44
MTHFD1-204ENST00000553405 IFT22Q9H7X7 185 aa12.31□□□□□ -0.44
MTHFD1-204ENST00000553405 STEAP1Q9UHE8 339 aa12.31□□□□□ -0.44
MTHFD1-204ENST00000553405 A0A0B4J203 849 aa12.3□□□□□ -0.44
MTHFD1-204ENST00000553405 TRAV24A0A0B4J272 114 aa12.3□□□□□ -0.44
MTHFD1-204ENST00000553405 K7N7A8 449 aa12.3□□□□□ -0.44
MTHFD1-204ENST00000553405 GEMIN2O14893 280 aaKnown RBP12.3□□□□□ -0.44
MTHFD1-204ENST00000553405 PHF1O43189 567 aaPredicted RBP12.3□□□□□ -0.44
MTHFD1-204ENST00000553405 PSPNO60542 156 aa12.3□□□□□ -0.44
MTHFD1-204ENST00000553405 OR2H2O95918 312 aa12.3□□□□□ -0.44
MTHFD1-204ENST00000553405 SLC2A2P11168 524 aaPredicted RBP12.3□□□□□ -0.44
MTHFD1-204ENST00000553405 SNU13P55769 128 aaKnown RBP12.3□□□□□ -0.44
MTHFD1-204ENST00000553405 COL10A1Q03692 680 aa12.3□□□□□ -0.44
MTHFD1-204ENST00000553405 MXD1Q05195 221 aa12.3□□□□□ -0.44
MTHFD1-204ENST00000553405 BLMHQ13867 455 aa12.3□□□□□ -0.44
MTHFD1-204ENST00000553405 HES5Q5TA89 166 aa12.3□□□□□ -0.44
MTHFD1-204ENST00000553405 SIGIRRQ6IA17 410 aa12.3□□□□□ -0.44
MTHFD1-204ENST00000553405 SFXN4Q6P4A7 337 aa12.3□□□□□ -0.44
MTHFD1-204ENST00000553405 SLC36A1Q7Z2H8 476 aa12.3□□□□□ -0.44
MTHFD1-204ENST00000553405 OSR2Q8N2R0 312 aa12.3□□□□□ -0.44
MTHFD1-204ENST00000553405 ZNF561Q8N587 486 aa12.3□□□□□ -0.44
MTHFD1-204ENST00000553405 OR8B3Q8NGG8 313 aa12.3□□□□□ -0.44
MTHFD1-204ENST00000553405 FAM3DQ96BQ1 224 aa12.3□□□□□ -0.44
MTHFD1-204ENST00000553405 MRPS24Q96EL2 167 aaKnown RBP12.3□□□□□ -0.44
MTHFD1-204ENST00000553405 OR8B2Q96RD0 313 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms