RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 AKAP14Q86UN6 197 aa16.6■□□□□ 0.25
RBFOX1-215ENST00000553186 C11orf53Q8IXP5 236 aa16.6■□□□□ 0.25
RBFOX1-215ENST00000553186 NUP37Q8NFH4 326 aa16.6■□□□□ 0.25
RBFOX1-215ENST00000553186 OR4K15Q8NH41 348 aa16.6■□□□□ 0.25
RBFOX1-215ENST00000553186 ST6GALNAC5Q9BVH7 336 aa16.6■□□□□ 0.25
RBFOX1-215ENST00000553186 PLK3Q9H4B4 646 aa16.6■□□□□ 0.25
RBFOX1-215ENST00000553186 SMG1Q96Q15 3661 aaKnown RBP16.6■□□□□ 0.25
RBFOX1-215ENST00000553186 TRAPPC2P0DI81 140 aa16.6■□□□□ 0.25
RBFOX1-215ENST00000553186 TRAPPC2BP0DI82 140 aa16.6■□□□□ 0.25
RBFOX1-215ENST00000553186 PRKACAP17612 351 aa16.6■□□□□ 0.25
RBFOX1-215ENST00000553186 MECP2P51608 486 aaKnown RBP16.6■□□□□ 0.25
RBFOX1-215ENST00000553186 KLF3P57682 345 aaPredicted RBP16.6■□□□□ 0.25
RBFOX1-215ENST00000553186 RPS23P62266 143 aaKnown RBP16.6■□□□□ 0.25
RBFOX1-215ENST00000553186 NKPD1Q17RQ9 610 aa16.6■□□□□ 0.25
RBFOX1-215ENST00000553186 MPV17LQ2QL34 196 aa16.6■□□□□ 0.25
RBFOX1-215ENST00000553186 FAM58AQ8N1B3 248 aa16.6■□□□□ 0.25
RBFOX1-215ENST00000553186 PIAS4Q8N2W9 510 aaPredicted RBP16.6■□□□□ 0.25
RBFOX1-215ENST00000553186 SPERTQ8NA61 448 aa16.6■□□□□ 0.25
RBFOX1-215ENST00000553186 NRIP2Q9BQI9 281 aa16.6■□□□□ 0.25
RBFOX1-215ENST00000553186 GINS4Q9BRT9 223 aa16.6■□□□□ 0.25
RBFOX1-215ENST00000553186 TLNRD1Q9H1K6 362 aa16.6■□□□□ 0.25
RBFOX1-215ENST00000553186 SLC2A8Q9NY64 477 aa16.6■□□□□ 0.25
RBFOX1-215ENST00000553186 RCC2Q9P258 522 aaKnown RBP16.6■□□□□ 0.25
RBFOX1-215ENST00000553186 PLEKHA6Q9Y2H5 1048 aa16.6■□□□□ 0.25
RBFOX1-215ENST00000553186 PYCARD-AS1I3L0S3 204 aa16.59■□□□□ 0.25
RBFOX1-215ENST00000553186 PGA5P0DJD9 388 aa16.59■□□□□ 0.25
RBFOX1-215ENST00000553186 PMELP40967 661 aa16.59■□□□□ 0.25
RBFOX1-215ENST00000553186 BSPH1Q075Z2 132 aa16.59■□□□□ 0.25
RBFOX1-215ENST00000553186 IDO2Q6ZQW0 420 aa16.59■□□□□ 0.25
RBFOX1-215ENST00000553186 BEST4Q8NFU0 473 aa16.59■□□□□ 0.25
RBFOX1-215ENST00000553186 LILRB4Q8NHJ6 448 aa16.59■□□□□ 0.25
RBFOX1-215ENST00000553186 GIMAP1Q8WWP7 306 aa16.59■□□□□ 0.25
RBFOX1-215ENST00000553186 DYRK2Q92630 601 aa16.59■□□□□ 0.25
RBFOX1-215ENST00000553186 GTF3AQ92664 365 aaKnown RBP16.59■□□□□ 0.25
RBFOX1-215ENST00000553186 SYT3Q9BQG1 590 aa16.59■□□□□ 0.25
RBFOX1-215ENST00000553186 ABCD4O14678 606 aa16.58■□□□□ 0.25
RBFOX1-215ENST00000553186 PMP2P02689 132 aa16.58■□□□□ 0.25
RBFOX1-215ENST00000553186 CSN2P05814 226 aa16.58■□□□□ 0.25
RBFOX1-215ENST00000553186 ACAA1P09110 424 aaPredicted RBP16.58■□□□□ 0.25
RBFOX1-215ENST00000553186 DUSP1P28562 367 aa16.58■□□□□ 0.25
RBFOX1-215ENST00000553186 CDSNQ15517 529 aa16.58■□□□□ 0.25
RBFOX1-215ENST00000553186 ATAD3CQ5T2N8 411 aa16.58■□□□□ 0.25
RBFOX1-215ENST00000553186 OR13C8Q8NGS7 320 aa16.58■□□□□ 0.25
RBFOX1-215ENST00000553186 MAFIPQ8WZ33 124 aa16.58■□□□□ 0.25
RBFOX1-215ENST00000553186 CMSS1Q9BQ75 279 aaKnown RBP16.58■□□□□ 0.25
RBFOX1-215ENST00000553186 BEX2Q9BXY8 128 aa16.58■□□□□ 0.25
RBFOX1-215ENST00000553186 BEX1Q9HBH7 125 aa16.58■□□□□ 0.25
RBFOX1-215ENST00000553186 COQ3Q9NZJ6 369 aa16.58■□□□□ 0.25
RBFOX1-215ENST00000553186 IGKV1D-8A0A087WSZ0 117 aa16.58■□□□□ 0.24
RBFOX1-215ENST00000553186 ZSCAN5BA6NJL1 495 aa16.58■□□□□ 0.24
RBFOX1-215ENST00000553186 FAM90A27PA6NNH2 459 aa16.58■□□□□ 0.24
RBFOX1-215ENST00000553186 VAX1Q5SQQ9 334 aa16.58■□□□□ 0.24
RBFOX1-215ENST00000553186 LINC00596Q86U02 117 aa16.58■□□□□ 0.24
RBFOX1-215ENST00000553186 Q8IYB0 196 aa16.58■□□□□ 0.24
RBFOX1-215ENST00000553186 OR6F1Q8NGZ6 308 aa16.58■□□□□ 0.24
RBFOX1-215ENST00000553186 MRPL37Q9BZE1 423 aaKnown RBP16.58■□□□□ 0.24
RBFOX1-215ENST00000553186 CA10Q9NS85 328 aa16.58■□□□□ 0.24
RBFOX1-215ENST00000553186 ZNF701Q9NV72 531 aaPredicted RBP16.58■□□□□ 0.24
RBFOX1-215ENST00000553186 SCP2D1Q9UJQ7 156 aa16.58■□□□□ 0.24
RBFOX1-215ENST00000553186 UBE2QL1A1L167 161 aa16.57■□□□□ 0.24
RBFOX1-215ENST00000553186 NKX2-6A6NCS4 301 aa16.57■□□□□ 0.24
RBFOX1-215ENST00000553186 DISC1C4P0D8 188 aa16.57■□□□□ 0.24
RBFOX1-215ENST00000553186 TPD52L2O43399 206 aaKnown RBP16.57■□□□□ 0.24
RBFOX1-215ENST00000553186 NOS1APO75052 506 aaPredicted RBP16.57■□□□□ 0.24
RBFOX1-215ENST00000553186 IL13RA2Q14627 380 aa16.57■□□□□ 0.24
RBFOX1-215ENST00000553186 MPPED2Q15777 294 aa16.57■□□□□ 0.24
RBFOX1-215ENST00000553186 MRGPRFQ96AM1 343 aa16.57■□□□□ 0.24
RBFOX1-215ENST00000553186 SLC25A21Q9BQT8 299 aaPredicted RBP16.57■□□□□ 0.24
RBFOX1-215ENST00000553186 AMY2BP19961 511 aa16.57■□□□□ 0.24
RBFOX1-215ENST00000553186 ANXA7P20073 488 aaKnown RBP16.57■□□□□ 0.24
RBFOX1-215ENST00000553186 DTYMKP23919 212 aa16.57■□□□□ 0.24
RBFOX1-215ENST00000553186 IKZF1Q13422 519 aa16.57■□□□□ 0.24
RBFOX1-215ENST00000553186 ACTBL2Q562R1 376 aa16.57■□□□□ 0.24
RBFOX1-215ENST00000553186 PRAMEF6Q5VXH4 476 aa16.57■□□□□ 0.24
RBFOX1-215ENST00000553186 OR2Z1Q8NG97 314 aa16.57■□□□□ 0.24
RBFOX1-215ENST00000553186 RNASE6Q93091 150 aaKnown RBP16.57■□□□□ 0.24
RBFOX1-215ENST00000553186 PRRT1Q99946 306 aa16.57■□□□□ 0.24
RBFOX1-215ENST00000553186 ZNF442Q9H7R0 627 aa16.57■□□□□ 0.24
RBFOX1-215ENST00000553186 PLCE1Q9P212 2302 aa16.56■□□□□ 0.24
RBFOX1-215ENST00000553186 CCNKO75909 580 aa16.56■□□□□ 0.24
RBFOX1-215ENST00000553186 FCGR3AP08637 254 aa16.56■□□□□ 0.24
RBFOX1-215ENST00000553186 RRAS2P62070 204 aaPredicted RBP16.56■□□□□ 0.24
RBFOX1-215ENST00000553186 ZMYND11Q15326 602 aa16.56■□□□□ 0.24
RBFOX1-215ENST00000553186 ST3GAL2Q16842 350 aa16.56■□□□□ 0.24
RBFOX1-215ENST00000553186 SCGB2B2Q4G0G5 96 aa16.56■□□□□ 0.24
RBFOX1-215ENST00000553186 SLC22A25Q6T423 547 aa16.56■□□□□ 0.24
RBFOX1-215ENST00000553186 Q6ZPA2 131 aa16.56■□□□□ 0.24
RBFOX1-215ENST00000553186 ZNF826PQ6ZT77 177 aa16.56■□□□□ 0.24
RBFOX1-215ENST00000553186 MRPL24Q96A35 216 aaKnown RBP16.56■□□□□ 0.24
RBFOX1-215ENST00000553186 IFT22Q9H7X7 185 aa16.56■□□□□ 0.24
RBFOX1-215ENST00000553186 HES4Q9HCC6 221 aa16.56■□□□□ 0.24
RBFOX1-215ENST00000553186 A0A1B0GUH1 482 aa16.55■□□□□ 0.24
RBFOX1-215ENST00000553186 PRAF2O60831 178 aa16.55■□□□□ 0.24
RBFOX1-215ENST00000553186 PTBP3O95758 552 aaKnown RBP16.55■□□□□ 0.24
RBFOX1-215ENST00000553186 GRNP28799 593 aaKnown RBP16.55■□□□□ 0.24
RBFOX1-215ENST00000553186 WDR82Q6UXN9 313 aa16.55■□□□□ 0.24
RBFOX1-215ENST00000553186 POC1AQ8NBT0 407 aa16.55■□□□□ 0.24
RBFOX1-215ENST00000553186 OR5AP2Q8NGF4 316 aa16.55■□□□□ 0.24
RBFOX1-215ENST00000553186 ST6GAL2Q96JF0 529 aa16.55■□□□□ 0.24
RBFOX1-215ENST00000553186 CHST6Q9GZX3 395 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms