RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 ZNF286AQ9HBT8 521 aa12.02□□□□□ -0.49
RAB3IP-216ENST00000552199 C12orf4Q9NQ89 552 aa12.02□□□□□ -0.49
RAB3IP-216ENST00000552199 PLSCR2Q9NRY7 297 aa12.02□□□□□ -0.49
RAB3IP-216ENST00000552199 PRR13Q9NZ81 148 aa12.02□□□□□ -0.49
RAB3IP-216ENST00000552199 MTCH1Q9NZJ7 389 aa12.02□□□□□ -0.49
RAB3IP-216ENST00000552199 F8VVB4 439 aa12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 F8VWA3 439 aa12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 TRAPPC2LH3BP13 241 aa12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 J3QW42 95 aa12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 OR2F2O95006 317 aa12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 KNG1P01042 644 aa12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 CRHP06850 196 aa12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 IL32P24001 234 aa12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 PSMB6P28072 239 aa12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 CALCRP30988 508 aa12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 PTGER4P35408 488 aa12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 OR2F1Q13607 317 aa12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 ZNF345Q14585 488 aa12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 GABRA6Q16445 453 aa12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 OR2T2Q6IF00 324 aa12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 SLC22A25Q6T423 547 aa12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 Q6ZT83 130 aa12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 SLC51BQ86UW2 128 aa12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 ZADH2Q8N4Q0 377 aa12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 THAP6Q8TBB0 222 aa12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 PCNPQ8WW12 178 aaKnown RBP12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 MARS2Q96GW9 593 aaKnown RBP12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 HS3ST6Q96QI5 342 aa12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 MUC6Q6W4X9 2439 aa12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 URB1O60287 2271 aaKnown RBP12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 ZNF292O60281 2723 aa12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 OR5B21A6NL26 309 aa12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 TPD52L2O43399 206 aaKnown RBP12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 ADAP1O75689 374 aa12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 LYZL6O75951 148 aa12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 CNOT4O95628 575 aaKnown RBP12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 CELA3BP08861 270 aa12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 KIR2DL2P43627 348 aaPredicted RBP12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 MRPL49Q13405 166 aaKnown RBP12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 FBXW12Q6X9E4 464 aa12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 Q6ZPA2 131 aa12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 ACOT7LQ6ZUV0 252 aa12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 MYPOPQ86VE0 399 aaPredicted RBP12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 CNEP1R1Q8N9A8 125 aa12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 C9orf106Q8NAJ2 232 aa12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 EXTL1Q92935 676 aa12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 PRRX2Q99811 253 aa12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 CHMP1AQ9HD42 196 aaPredicted RBP12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 KIF25Q9UIL4 384 aa12.01□□□□□ -0.49
RAB3IP-216ENST00000552199 A0A1W2PR80 420 aa12□□□□□ -0.49
RAB3IP-216ENST00000552199 SYNGR1O43759 233 aa12□□□□□ -0.49
RAB3IP-216ENST00000552199 IFNA2P01563 188 aa12□□□□□ -0.49
RAB3IP-216ENST00000552199 HOXB1P14653 301 aaPredicted RBP12□□□□□ -0.49
RAB3IP-216ENST00000552199 GNG3P63215 75 aa12□□□□□ -0.49
RAB3IP-216ENST00000552199 MPV17LQ2QL34 196 aa12□□□□□ -0.49
RAB3IP-216ENST00000552199 SPATA46Q5T0L3 261 aa12□□□□□ -0.49
RAB3IP-216ENST00000552199 INO80CQ6PI98 192 aaPredicted RBP12□□□□□ -0.49
RAB3IP-216ENST00000552199 ZNF573Q86YE8 665 aa12□□□□□ -0.49
RAB3IP-216ENST00000552199 SCARB1Q8WTV0 552 aa12□□□□□ -0.49
RAB3IP-216ENST00000552199 TAAR6Q96RI8 345 aa12□□□□□ -0.49
RAB3IP-216ENST00000552199 CDH20Q9HBT6 801 aa12□□□□□ -0.49
RAB3IP-216ENST00000552199 RNF222A6NCQ9 220 aa11.99□□□□□ -0.49
RAB3IP-216ENST00000552199 CRYM-AS1A6NIL9 109 aa11.99□□□□□ -0.49
RAB3IP-216ENST00000552199 CA6P23280 308 aa11.99□□□□□ -0.49
RAB3IP-216ENST00000552199 IDH3GP51553 393 aaPredicted RBP11.99□□□□□ -0.49
RAB3IP-216ENST00000552199 ZNF169Q14929 603 aaPredicted RBP11.99□□□□□ -0.49
RAB3IP-216ENST00000552199 ATXN7L3Q14CW9 347 aaPredicted RBP11.99□□□□□ -0.49
RAB3IP-216ENST00000552199 PLEKHN1Q494U1 663 aaPredicted RBP11.99□□□□□ -0.49
RAB3IP-216ENST00000552199 HAGHLQ6PII5 290 aaPredicted RBP11.99□□□□□ -0.49
RAB3IP-216ENST00000552199 ALKAL2Q6UX46 152 aa11.99□□□□□ -0.49
RAB3IP-216ENST00000552199 SGPP2Q8IWX5 399 aa11.99□□□□□ -0.49
RAB3IP-216ENST00000552199 VRK1Q99986 396 aaPredicted RBP11.99□□□□□ -0.49
RAB3IP-216ENST00000552199 METTL8Q9H825 291 aaKnown RBP11.99□□□□□ -0.49
RAB3IP-216ENST00000552199 RCC2Q9P258 522 aaKnown RBP11.99□□□□□ -0.49
RAB3IP-216ENST00000552199 MBD2Q9UBB5 411 aa11.99□□□□□ -0.49
RAB3IP-216ENST00000552199 LHX6Q9UPM6 363 aa11.99□□□□□ -0.49
RAB3IP-216ENST00000552199 AHRRA9YTQ3 701 aa11.99□□□□□ -0.49
RAB3IP-216ENST00000552199 SMPD2O60906 423 aa11.99□□□□□ -0.49
RAB3IP-216ENST00000552199 ZNF728P0DKX0 622 aa11.99□□□□□ -0.49
RAB3IP-216ENST00000552199 PPP1CBP62140 327 aa11.99□□□□□ -0.49
RAB3IP-216ENST00000552199 IL24Q13007 206 aa11.99□□□□□ -0.49
RAB3IP-216ENST00000552199 ACSF3Q4G176 576 aaPredicted RBP11.99□□□□□ -0.49
RAB3IP-216ENST00000552199 OR2A2Q6IF42 318 aa11.99□□□□□ -0.49
RAB3IP-216ENST00000552199 VWA1Q6PCB0 445 aa11.99□□□□□ -0.49
RAB3IP-216ENST00000552199 IGFL3Q6UXB1 125 aa11.99□□□□□ -0.49
RAB3IP-216ENST00000552199 Q6ZS49 121 aa11.99□□□□□ -0.49
RAB3IP-216ENST00000552199 BOD1Q96IK1 185 aa11.99□□□□□ -0.49
RAB3IP-216ENST00000552199 C2orf50Q96LR7 162 aa11.99□□□□□ -0.49
RAB3IP-216ENST00000552199 MICU1Q9BPX6 476 aa11.99□□□□□ -0.49
RAB3IP-216ENST00000552199 RNF126Q9BV68 326 aa11.99□□□□□ -0.49
RAB3IP-216ENST00000552199 WDR13Q9H1Z4 485 aa11.99□□□□□ -0.49
RAB3IP-216ENST00000552199 PLK3Q9H4B4 646 aa11.99□□□□□ -0.49
RAB3IP-216ENST00000552199 C1orf123Q9NWV4 160 aa11.99□□□□□ -0.49
RAB3IP-216ENST00000552199 IL36RNQ9UBH0 155 aa11.99□□□□□ -0.49
RAB3IP-216ENST00000552199 DMXL1Q9Y485 3027 aa11.98□□□□□ -0.49
RAB3IP-216ENST00000552199 TRBV6-7A0A0A0MS04 114 aa11.98□□□□□ -0.49
RAB3IP-216ENST00000552199 TEX13DA0A0J9YY54 714 aaPredicted RBP11.98□□□□□ -0.49
RAB3IP-216ENST00000552199 MPTX1A8MV57 137 aa11.98□□□□□ -0.49
RAB3IP-216ENST00000552199 ZNF205O95201 554 aa11.98□□□□□ -0.49
RAB3IP-216ENST00000552199 PRKACAP17612 351 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms