RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 CD79AP11912 226 aa4.92□□□□□ -1.62
VPS29-210ENST00000552130 TCN2P20062 427 aa4.92□□□□□ -1.62
VPS29-210ENST00000552130 VDAC2P45880 294 aaPredicted RBP4.92□□□□□ -1.62
VPS29-210ENST00000552130 LGALS7P47929 136 aa4.92□□□□□ -1.62
VPS29-210ENST00000552130 RIPPLY3P57055 190 aa4.92□□□□□ -1.62
VPS29-210ENST00000552130 SELENOTP62341 195 aa4.92□□□□□ -1.62
VPS29-210ENST00000552130 DYNLL1P63167 89 aaKnown RBP4.92□□□□□ -1.62
VPS29-210ENST00000552130 SLC10A1Q14973 349 aa4.92□□□□□ -1.62
VPS29-210ENST00000552130 LRRC36Q1X8D7 754 aa4.92□□□□□ -1.62
VPS29-210ENST00000552130 KLHL12Q53G59 568 aa4.92□□□□□ -1.62
VPS29-210ENST00000552130 ZNF620Q6ZNG0 422 aa4.92□□□□□ -1.62
VPS29-210ENST00000552130 IDO2Q6ZQW0 420 aa4.92□□□□□ -1.62
VPS29-210ENST00000552130 TRPT1Q86TN4 253 aaKnown RBP4.92□□□□□ -1.62
VPS29-210ENST00000552130 NAA40Q86UY6 237 aa4.92□□□□□ -1.62
VPS29-210ENST00000552130 SLC35F6Q8N357 371 aa4.92□□□□□ -1.62
VPS29-210ENST00000552130 LRRC18Q8N456 261 aa4.92□□□□□ -1.62
VPS29-210ENST00000552130 OR10AD1Q8NGE0 317 aa4.92□□□□□ -1.62
VPS29-210ENST00000552130 OR10D3Q8NH80 312 aa4.92□□□□□ -1.62
VPS29-210ENST00000552130 ZNF285Q96NJ3 590 aa4.92□□□□□ -1.62
VPS29-210ENST00000552130 METTL26Q96S19 204 aa4.92□□□□□ -1.62
VPS29-210ENST00000552130 ABCG5Q9H222 651 aa4.92□□□□□ -1.62
VPS29-210ENST00000552130 PANK3Q9H999 370 aa4.92□□□□□ -1.62
VPS29-210ENST00000552130 WFDC1Q9HC57 220 aa4.92□□□□□ -1.62
VPS29-210ENST00000552130 ASB4Q9Y574 426 aa4.92□□□□□ -1.62
VPS29-210ENST00000552130 CEP152O94986 1710 aa4.92□□□□□ -1.62
VPS29-210ENST00000552130 SAA2-SAA4A0A096LPE2 208 aa4.91□□□□□ -1.62
VPS29-210ENST00000552130 IGHV3OR16-9A0A0B4J2B5 98 aa4.91□□□□□ -1.62
VPS29-210ENST00000552130 TMEM150BA6NC51 233 aa4.91□□□□□ -1.62
VPS29-210ENST00000552130 FOXI3A8MTJ6 420 aaPredicted RBP4.91□□□□□ -1.62
VPS29-210ENST00000552130 FAM220BPB1ANY3 271 aa4.91□□□□□ -1.62
VPS29-210ENST00000552130 C16orf97H3BN30 126 aa4.91□□□□□ -1.62
VPS29-210ENST00000552130 I3L4J1 428 aa4.91□□□□□ -1.62
VPS29-210ENST00000552130 AGPAT2O15120 278 aa4.91□□□□□ -1.62
VPS29-210ENST00000552130 SULT1A3P0DMM9 295 aa4.91□□□□□ -1.62
VPS29-210ENST00000552130 SULT1A4P0DMN0 295 aa4.91□□□□□ -1.62
VPS29-210ENST00000552130 IGLL1P15814 213 aa4.91□□□□□ -1.62
VPS29-210ENST00000552130 ZNF708P17019 499 aa4.91□□□□□ -1.62
VPS29-210ENST00000552130 CXCL3P19876 107 aa4.91□□□□□ -1.62
VPS29-210ENST00000552130 IGHV1-2P23083 117 aa4.91□□□□□ -1.62
VPS29-210ENST00000552130 CD34P28906 385 aa4.91□□□□□ -1.62
VPS29-210ENST00000552130 MIPP30301 263 aa4.91□□□□□ -1.62
VPS29-210ENST00000552130 AGTR1P30556 359 aa4.91□□□□□ -1.62
VPS29-210ENST00000552130 PRR3P79522 188 aaKnown RBP4.91□□□□□ -1.62
VPS29-210ENST00000552130 EMX1Q04741 257 aaPredicted RBP4.91□□□□□ -1.62
VPS29-210ENST00000552130 ZNF630Q2M218 657 aaPredicted RBP4.91□□□□□ -1.62
VPS29-210ENST00000552130 C17orf58Q2M2W7 97 aa4.91□□□□□ -1.62
VPS29-210ENST00000552130 TMEM128Q5BJH2 165 aa4.91□□□□□ -1.62
VPS29-210ENST00000552130 ZNF684Q5T5D7 378 aa4.91□□□□□ -1.62
VPS29-210ENST00000552130 LCE1EQ5T753 118 aa4.91□□□□□ -1.62
VPS29-210ENST00000552130 TEX36Q5VZQ5 186 aa4.91□□□□□ -1.62
VPS29-210ENST00000552130 OPN5Q6U736 354 aa4.91□□□□□ -1.62
VPS29-210ENST00000552130 TMEM205Q6UW68 189 aa4.91□□□□□ -1.62
VPS29-210ENST00000552130 PAMR1Q6UXH9 720 aa4.91□□□□□ -1.62
VPS29-210ENST00000552130 DGAT2L6Q6ZPD8 337 aa4.91□□□□□ -1.62
VPS29-210ENST00000552130 DNM1P46Q6ZS02 220 aa4.91□□□□□ -1.62
VPS29-210ENST00000552130 ZNF771Q7L3S4 317 aaPredicted RBP4.91□□□□□ -1.62
VPS29-210ENST00000552130 NEGR1Q7Z3B1 354 aa4.91□□□□□ -1.62
VPS29-210ENST00000552130 C1orf158Q8N1D5 194 aa4.91□□□□□ -1.62
VPS29-210ENST00000552130 OR2M7Q8NG81 312 aa4.91□□□□□ -1.62
VPS29-210ENST00000552130 OR8J3Q8NGG0 315 aa4.91□□□□□ -1.62
VPS29-210ENST00000552130 OR9A2Q8NGT5 310 aa4.91□□□□□ -1.62
VPS29-210ENST00000552130 OR10J6PQ8NGY7 276 aa4.91□□□□□ -1.62
VPS29-210ENST00000552130 CD200R1Q8TD46 325 aa4.91□□□□□ -1.62
VPS29-210ENST00000552130 RPL36ALQ969Q0 106 aaKnown RBP4.91□□□□□ -1.62
VPS29-210ENST00000552130 FAM3DQ96BQ1 224 aa4.91□□□□□ -1.62
VPS29-210ENST00000552130 SMARCD1Q96GM5 515 aa4.91□□□□□ -1.62
VPS29-210ENST00000552130 DIRAS2Q96HU8 199 aa4.91□□□□□ -1.62
VPS29-210ENST00000552130 MARVELD1Q9BSK0 173 aa4.91□□□□□ -1.62
VPS29-210ENST00000552130 ZNF223Q9UK11 482 aaPredicted RBP4.91□□□□□ -1.62
VPS29-210ENST00000552130 BRCA1P38398 1863 aaKnown RBP4.9□□□□□ -1.62
VPS29-210ENST00000552130 TRAV8-2A0A0B4J237 113 aa4.9□□□□□ -1.63
VPS29-210ENST00000552130 TRAV8-6A0A0B4J262 113 aa4.9□□□□□ -1.63
VPS29-210ENST00000552130 TEX50A0A1B0GTY4 177 aa4.9□□□□□ -1.63
VPS29-210ENST00000552130 A0A1B0GV90 55 aa4.9□□□□□ -1.63
VPS29-210ENST00000552130 PQLC2LA1A4F0 135 aa4.9□□□□□ -1.63
VPS29-210ENST00000552130 ATP6V1G2-DDX39BF2Z307 99 aa4.9□□□□□ -1.63
VPS29-210ENST00000552130 H0Y9J4 135 aa4.9□□□□□ -1.63
VPS29-210ENST00000552130 YIF1AO95070 293 aa4.9□□□□□ -1.63
VPS29-210ENST00000552130 OR5G3P0C626 314 aa4.9□□□□□ -1.63
VPS29-210ENST00000552130 SPNP16150 400 aa4.9□□□□□ -1.63
VPS29-210ENST00000552130 CXCL2P19875 107 aa4.9□□□□□ -1.63
VPS29-210ENST00000552130 DRD3P35462 400 aa4.9□□□□□ -1.63
VPS29-210ENST00000552130 CTRLP40313 264 aa4.9□□□□□ -1.63
VPS29-210ENST00000552130 NDUFA8P51970 172 aa4.9□□□□□ -1.63
VPS29-210ENST00000552130 RPS23P62266 143 aaKnown RBP4.9□□□□□ -1.63
VPS29-210ENST00000552130 RHOBP62745 196 aa4.9□□□□□ -1.63
VPS29-210ENST00000552130 ZNF763Q0D2J5 394 aa4.9□□□□□ -1.63
VPS29-210ENST00000552130 LAMTOR4Q0VGL1 99 aa4.9□□□□□ -1.63
VPS29-210ENST00000552130 KLF9Q13886 244 aaPredicted RBP4.9□□□□□ -1.63
VPS29-210ENST00000552130 IHHQ14623 411 aa4.9□□□□□ -1.63
VPS29-210ENST00000552130 SURF2Q15527 256 aaPredicted RBP4.9□□□□□ -1.63
VPS29-210ENST00000552130 WHAMMP3Q1A5X7 153 aa4.9□□□□□ -1.63
VPS29-210ENST00000552130 ZNF718Q3SXZ3 478 aa4.9□□□□□ -1.63
VPS29-210ENST00000552130 RSBN1Q5VWQ0 802 aaPredicted RBP4.9□□□□□ -1.63
VPS29-210ENST00000552130 ELP2Q6IA86 826 aa4.9□□□□□ -1.63
VPS29-210ENST00000552130 C6orf120Q7Z4R8 191 aa4.9□□□□□ -1.63
VPS29-210ENST00000552130 NFE4Q86UQ8 179 aa4.9□□□□□ -1.63
VPS29-210ENST00000552130 C17orf82Q86X59 251 aaPredicted RBP4.9□□□□□ -1.63
VPS29-210ENST00000552130 MUC15Q8N387 334 aa4.9□□□□□ -1.63
VPS29-210ENST00000552130 CADM2Q8N3J6 435 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms