RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 LIME1Q9H400 295 aa9.84□□□□□ -0.83
RAB5C-208ENST00000551338 ZNF286AQ9HBT8 521 aa9.84□□□□□ -0.83
RAB5C-208ENST00000551338 SHPKQ9UHJ6 478 aa9.84□□□□□ -0.83
RAB5C-208ENST00000551338 FAM215AQ9Y5M1 114 aa9.84□□□□□ -0.83
RAB5C-208ENST00000551338 HEATR1Q9H583 2144 aaKnown RBP9.83□□□□□ -0.84
RAB5C-208ENST00000551338 FXYD6-FXYD2A0A087WZ82 144 aa9.83□□□□□ -0.84
RAB5C-208ENST00000551338 IQCF6A8MYZ5 107 aa9.83□□□□□ -0.84
RAB5C-208ENST00000551338 TRAPPC2LH3BP13 241 aa9.83□□□□□ -0.84
RAB5C-208ENST00000551338 J3QT63 122 aa9.83□□□□□ -0.84
RAB5C-208ENST00000551338 OR7C1O76099 320 aaPredicted RBP9.83□□□□□ -0.84
RAB5C-208ENST00000551338 CRYABP02511 175 aaKnown RBP9.83□□□□□ -0.84
RAB5C-208ENST00000551338 RAC2P15153 192 aa9.83□□□□□ -0.84
RAB5C-208ENST00000551338 PGAM2P15259 253 aa9.83□□□□□ -0.84
RAB5C-208ENST00000551338 HOXC12P31275 282 aa9.83□□□□□ -0.84
RAB5C-208ENST00000551338 MPV17P39210 176 aa9.83□□□□□ -0.84
RAB5C-208ENST00000551338 HTR2BP41595 481 aa9.83□□□□□ -0.84
RAB5C-208ENST00000551338 SEC61A1P61619 476 aaKnown RBP9.83□□□□□ -0.84
RAB5C-208ENST00000551338 IL24Q13007 206 aa9.83□□□□□ -0.84
RAB5C-208ENST00000551338 IL13RA2Q14627 380 aa9.83□□□□□ -0.84
RAB5C-208ENST00000551338 MPV17LQ2QL34 196 aa9.83□□□□□ -0.84
RAB5C-208ENST00000551338 ALKBH6Q3KRA9 238 aa9.83□□□□□ -0.84
RAB5C-208ENST00000551338 TMEM128Q5BJH2 165 aa9.83□□□□□ -0.84
RAB5C-208ENST00000551338 TMEM211Q6ICI0 200 aa9.83□□□□□ -0.84
RAB5C-208ENST00000551338 ZNF573Q86YE8 665 aa9.83□□□□□ -0.84
RAB5C-208ENST00000551338 C17orf78Q8N4C9 275 aa9.83□□□□□ -0.84
RAB5C-208ENST00000551338 RPRMLQ8N4K4 120 aa9.83□□□□□ -0.84
RAB5C-208ENST00000551338 OR8H1Q8NGG4 311 aa9.83□□□□□ -0.84
RAB5C-208ENST00000551338 OR1J1Q8NGS3 322 aa9.83□□□□□ -0.84
RAB5C-208ENST00000551338 ZNF488Q96MN9 340 aa9.83□□□□□ -0.84
RAB5C-208ENST00000551338 PHB2Q99623 299 aa9.83□□□□□ -0.84
RAB5C-208ENST00000551338 ZNF2Q9BSG1 426 aaPredicted RBP9.83□□□□□ -0.84
RAB5C-208ENST00000551338 DPCDQ9BVM2 203 aaPredicted RBP9.83□□□□□ -0.84
RAB5C-208ENST00000551338 OR51I2Q9H344 312 aa9.83□□□□□ -0.84
RAB5C-208ENST00000551338 ZNF442Q9H7R0 627 aa9.83□□□□□ -0.84
RAB5C-208ENST00000551338 C12orf4Q9NQ89 552 aa9.83□□□□□ -0.84
RAB5C-208ENST00000551338 ZNF71Q9NQZ8 489 aaPredicted RBP9.83□□□□□ -0.84
RAB5C-208ENST00000551338 DECR2Q9NUI1 292 aa9.83□□□□□ -0.84
RAB5C-208ENST00000551338 DMDP11532 3685 aa9.83□□□□□ -0.84
RAB5C-208ENST00000551338 WDFY3Q8IZQ1 3526 aa9.83□□□□□ -0.84
RAB5C-208ENST00000551338 M0R233 179 aa9.82□□□□□ -0.84
RAB5C-208ENST00000551338 ERVH48-1M5A8F1 160 aa9.82□□□□□ -0.84
RAB5C-208ENST00000551338 ARPC5O15511 151 aa9.82□□□□□ -0.84
RAB5C-208ENST00000551338 IGLV1-44P01699 117 aa9.82□□□□□ -0.84
RAB5C-208ENST00000551338 CRHP06850 196 aa9.82□□□□□ -0.84
RAB5C-208ENST00000551338 CTSDP07339 412 aaPredicted RBP9.82□□□□□ -0.84
RAB5C-208ENST00000551338 PRKACAP17612 351 aa9.82□□□□□ -0.84
RAB5C-208ENST00000551338 GLRA1P23415 457 aa9.82□□□□□ -0.84
RAB5C-208ENST00000551338 CALCRP30988 508 aa9.82□□□□□ -0.84
RAB5C-208ENST00000551338 ECI1P42126 302 aa9.82□□□□□ -0.84
RAB5C-208ENST00000551338 SLC9A3R2Q15599 337 aa9.82□□□□□ -0.84
RAB5C-208ENST00000551338 TEX261Q6UWH6 196 aa9.82□□□□□ -0.84
RAB5C-208ENST00000551338 CLEC18BQ6UXF7 455 aa9.82□□□□□ -0.84
RAB5C-208ENST00000551338 KCTD9Q7L273 389 aa9.82□□□□□ -0.84
RAB5C-208ENST00000551338 BHLHA15Q7RTS1 189 aaPredicted RBP9.82□□□□□ -0.84
RAB5C-208ENST00000551338 SPACA3Q8IXA5 215 aa9.82□□□□□ -0.84
RAB5C-208ENST00000551338 RTL8AQ9BWD3 113 aa9.82□□□□□ -0.84
RAB5C-208ENST00000551338 SCNM1Q9BWG6 230 aa9.82□□□□□ -0.84
RAB5C-208ENST00000551338 C1QTNF6Q9BXI9 259 aa9.82□□□□□ -0.84
RAB5C-208ENST00000551338 OBP2BQ9NPH6 170 aa9.82□□□□□ -0.84
RAB5C-208ENST00000551338 NECAP2Q9NVZ3 263 aa9.82□□□□□ -0.84
RAB5C-208ENST00000551338 WASF3Q9UPY6 502 aa9.82□□□□□ -0.84
RAB5C-208ENST00000551338 U3KQ87 197 aa9.82□□□□□ -0.84
RAB5C-208ENST00000551338 PRR14LQ5THK1 2151 aa9.82□□□□□ -0.84
RAB5C-208ENST00000551338 LRP5LA4QPB2 252 aa9.81□□□□□ -0.84
RAB5C-208ENST00000551338 PRSS44E7EML9 344 aa9.81□□□□□ -0.84
RAB5C-208ENST00000551338 C3orf80F5H4A9 247 aa9.81□□□□□ -0.84
RAB5C-208ENST00000551338 MKRN2OSH3BPM6 223 aa9.81□□□□□ -0.84
RAB5C-208ENST00000551338 NOS1APO75052 506 aaPredicted RBP9.81□□□□□ -0.84
RAB5C-208ENST00000551338 RHBDL1O75783 438 aa9.81□□□□□ -0.84
RAB5C-208ENST00000551338 NAPSAO96009 420 aa9.81□□□□□ -0.84
RAB5C-208ENST00000551338 CFDP00746 253 aaPredicted RBP9.81□□□□□ -0.84
RAB5C-208ENST00000551338 CECR9P0C854 216 aa9.81□□□□□ -0.84
RAB5C-208ENST00000551338 OR5H8P0DN80 308 aa9.81□□□□□ -0.84
RAB5C-208ENST00000551338 SLC25A4P12235 298 aa9.81□□□□□ -0.84
RAB5C-208ENST00000551338 RPA2P15927 270 aa9.81□□□□□ -0.84
RAB5C-208ENST00000551338 NFYAP23511 347 aaPredicted RBP9.81□□□□□ -0.84
RAB5C-208ENST00000551338 SERPINF1P36955 418 aa9.81□□□□□ -0.84
RAB5C-208ENST00000551338 UCP2P55851 309 aa9.81□□□□□ -0.84
RAB5C-208ENST00000551338 PSG7Q13046 419 aa9.81□□□□□ -0.84
RAB5C-208ENST00000551338 EXOSC2Q13868 293 aaKnown RBP9.81□□□□□ -0.84
RAB5C-208ENST00000551338 EIF2S3LQ2VIR3 472 aaKnown RBP9.81□□□□□ -0.84
RAB5C-208ENST00000551338 ANKRD55Q3KP44 614 aa9.81□□□□□ -0.84
RAB5C-208ENST00000551338 ZNF324BQ6AW86 544 aaPredicted RBP9.81□□□□□ -0.84
RAB5C-208ENST00000551338 Q6ZS49 121 aa9.81□□□□□ -0.84
RAB5C-208ENST00000551338 LINC00596Q86U02 117 aa9.81□□□□□ -0.84
RAB5C-208ENST00000551338 ZNF680Q8NEM1 530 aa9.81□□□□□ -0.84
RAB5C-208ENST00000551338 FAM57AQ8TBR7 257 aa9.81□□□□□ -0.84
RAB5C-208ENST00000551338 DHRS9Q9BPW9 319 aa9.81□□□□□ -0.84
RAB5C-208ENST00000551338 MICU1Q9BPX6 476 aa9.81□□□□□ -0.84
RAB5C-208ENST00000551338 ADAT1Q9BUB4 502 aaKnown RBP9.81□□□□□ -0.84
RAB5C-208ENST00000551338 PDCD10Q9BUL8 212 aa9.81□□□□□ -0.84
RAB5C-208ENST00000551338 PRR13Q9NZ81 148 aa9.81□□□□□ -0.84
RAB5C-208ENST00000551338 C14orf166Q9Y224 244 aaKnown RBP9.81□□□□□ -0.84
RAB5C-208ENST00000551338 TP53TG5Q9Y2B4 290 aa9.81□□□□□ -0.84
RAB5C-208ENST00000551338 AMDHD2Q9Y303 409 aa9.81□□□□□ -0.84
RAB5C-208ENST00000551338 SLC25A15Q9Y619 301 aa9.81□□□□□ -0.84
RAB5C-208ENST00000551338 SVILO95425 2214 aa9.8□□□□□ -0.84
RAB5C-208ENST00000551338 FRYLO94915 3013 aa9.8□□□□□ -0.84
RAB5C-208ENST00000551338 IGHV2OR16-5A0A0B4J2B6 119 aa9.8□□□□□ -0.84
RAB5C-208ENST00000551338 IGHV1-18A0A0C4DH31 117 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms