RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 GABARAPO95166 117 aa10.84□□□□□ -0.67
RAB5C-206ENST00000550406 VSIG8P0DPA2 414 aa10.84□□□□□ -0.67
RAB5C-206ENST00000550406 SLC2A2P11168 524 aaPredicted RBP10.84□□□□□ -0.67
RAB5C-206ENST00000550406 CD99P14209 185 aa10.84□□□□□ -0.67
RAB5C-206ENST00000550406 RPS2P15880 293 aaKnown RBP10.84□□□□□ -0.67
RAB5C-206ENST00000550406 SERPINA2P20848 420 aa10.84□□□□□ -0.67
RAB5C-206ENST00000550406 CFPP27918 469 aa10.84□□□□□ -0.67
RAB5C-206ENST00000550406 HTR2CP28335 458 aa10.84□□□□□ -0.67
RAB5C-206ENST00000550406 GABRA2P47869 451 aa10.84□□□□□ -0.67
RAB5C-206ENST00000550406 CLDN12P56749 244 aa10.84□□□□□ -0.67
RAB5C-206ENST00000550406 FGF12P61328 243 aa10.84□□□□□ -0.67
RAB5C-206ENST00000550406 MXD1Q05195 221 aa10.84□□□□□ -0.67
RAB5C-206ENST00000550406 PLA2G7Q13093 441 aa10.84□□□□□ -0.67
RAB5C-206ENST00000550406 P2RY14Q15391 338 aa10.84□□□□□ -0.67
RAB5C-206ENST00000550406 KCNJ8Q15842 424 aa10.84□□□□□ -0.67
RAB5C-206ENST00000550406 DGUOKQ16854 277 aa10.84□□□□□ -0.67
RAB5C-206ENST00000550406 SLC22A6Q4U2R8 563 aa10.84□□□□□ -0.67
RAB5C-206ENST00000550406 HES5Q5TA89 166 aa10.84□□□□□ -0.67
RAB5C-206ENST00000550406 OR10K2Q6IF99 312 aa10.84□□□□□ -0.67
RAB5C-206ENST00000550406 TPRA1Q86W33 373 aa10.84□□□□□ -0.67
RAB5C-206ENST00000550406 TMEM104Q8NE00 496 aa10.84□□□□□ -0.67
RAB5C-206ENST00000550406 OR6M1Q8NGM8 313 aa10.84□□□□□ -0.67
RAB5C-206ENST00000550406 MSI2Q96DH6 328 aaKnown RBP10.84□□□□□ -0.67
RAB5C-206ENST00000550406 NEIL1Q96FI4 390 aaPredicted RBP10.84□□□□□ -0.67
RAB5C-206ENST00000550406 SMR3AQ99954 134 aa10.84□□□□□ -0.67
RAB5C-206ENST00000550406 DNTTIP1Q9H147 329 aa10.84□□□□□ -0.67
RAB5C-206ENST00000550406 ELL3Q9HB65 397 aaPredicted RBP10.84□□□□□ -0.67
RAB5C-206ENST00000550406 OR14J1Q9UGF5 321 aa10.84□□□□□ -0.67
RAB5C-206ENST00000550406 ACANP16112 2415 aa10.84□□□□□ -0.67
RAB5C-206ENST00000550406 ABCA1O95477 2261 aa10.83□□□□□ -0.68
RAB5C-206ENST00000550406 A0A0B4J203 849 aa10.83□□□□□ -0.68
RAB5C-206ENST00000550406 IFITM5A6NNB3 132 aa10.83□□□□□ -0.68
RAB5C-206ENST00000550406 LDLRAD4O15165 306 aa10.83□□□□□ -0.68
RAB5C-206ENST00000550406 SIGLEC5O15389 551 aa10.83□□□□□ -0.68
RAB5C-206ENST00000550406 TMPRSS2O15393 492 aa10.83□□□□□ -0.68
RAB5C-206ENST00000550406 PHF1O43189 567 aaPredicted RBP10.83□□□□□ -0.68
RAB5C-206ENST00000550406 ZNF737O75373 536 aa10.83□□□□□ -0.68
RAB5C-206ENST00000550406 INHBBP09529 407 aa10.83□□□□□ -0.68
RAB5C-206ENST00000550406 RPS19P39019 145 aaKnown RBP10.83□□□□□ -0.68
RAB5C-206ENST00000550406 PITPNBP48739 271 aa10.83□□□□□ -0.68
RAB5C-206ENST00000550406 PSMD7P51665 324 aa10.83□□□□□ -0.68
RAB5C-206ENST00000550406 VBP1P61758 197 aa10.83□□□□□ -0.68
RAB5C-206ENST00000550406 COL10A1Q03692 680 aa10.83□□□□□ -0.68
RAB5C-206ENST00000550406 UNC119Q13432 240 aa10.83□□□□□ -0.68
RAB5C-206ENST00000550406 RAB11BQ15907 218 aa10.83□□□□□ -0.68
RAB5C-206ENST00000550406 PIGYQ3MUY2 71 aa10.83□□□□□ -0.68
RAB5C-206ENST00000550406 WDR25Q64LD2 544 aaPredicted RBP10.83□□□□□ -0.68
RAB5C-206ENST00000550406 ZNRF1Q8ND25 227 aa10.83□□□□□ -0.68
RAB5C-206ENST00000550406 RAB39BQ96DA2 213 aa10.83□□□□□ -0.68
RAB5C-206ENST00000550406 CYYR1Q96J86 154 aa10.83□□□□□ -0.68
RAB5C-206ENST00000550406 BANF2Q9H503 90 aa10.83□□□□□ -0.68
RAB5C-206ENST00000550406 PLGRKTQ9HBL7 147 aa10.83□□□□□ -0.68
RAB5C-206ENST00000550406 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.83□□□□□ -0.684e-11■■□□□ 13.1
RAB5C-206ENST00000550406 HIVEP1P15822 2718 aa10.82□□□□□ -0.68
RAB5C-206ENST00000550406 NOTOA8MTQ0 251 aa10.82□□□□□ -0.68
RAB5C-206ENST00000550406 TMEM14DPA8MWL7 114 aa10.82□□□□□ -0.68
RAB5C-206ENST00000550406 A8MXK9 166 aa10.82□□□□□ -0.68
RAB5C-206ENST00000550406 DVL1O14640 695 aa10.82□□□□□ -0.68
RAB5C-206ENST00000550406 PSPNO60542 156 aa10.82□□□□□ -0.68
RAB5C-206ENST00000550406 OR2H2O95918 312 aa10.82□□□□□ -0.68
RAB5C-206ENST00000550406 HAND1O96004 215 aa10.82□□□□□ -0.68
RAB5C-206ENST00000550406 FOSL1P15407 271 aa10.82□□□□□ -0.68
RAB5C-206ENST00000550406 CPT2P23786 658 aa10.82□□□□□ -0.68
RAB5C-206ENST00000550406 LMO1P25800 156 aa10.82□□□□□ -0.68
RAB5C-206ENST00000550406 BMXP51813 675 aa10.82□□□□□ -0.68
RAB5C-206ENST00000550406 RBM11P57052 281 aaKnown RBP10.82□□□□□ -0.68
RAB5C-206ENST00000550406 IL13RA1P78552 427 aa10.82□□□□□ -0.68
RAB5C-206ENST00000550406 PAX2Q02962 417 aa10.82□□□□□ -0.68
RAB5C-206ENST00000550406 IKZF1Q13422 519 aa10.82□□□□□ -0.68
RAB5C-206ENST00000550406 C2orf76Q3KRA6 126 aa10.82□□□□□ -0.68
RAB5C-206ENST00000550406 NHLRC3Q5JS37 347 aa10.82□□□□□ -0.68
RAB5C-206ENST00000550406 SPIN3Q5JUX0 258 aa10.82□□□□□ -0.68
RAB5C-206ENST00000550406 C17orf107Q6ZR85 190 aa10.82□□□□□ -0.68
RAB5C-206ENST00000550406 SLC36A1Q7Z2H8 476 aa10.82□□□□□ -0.68
RAB5C-206ENST00000550406 CLVS1Q8IUQ0 354 aaPredicted RBP10.82□□□□□ -0.68
RAB5C-206ENST00000550406 OSR2Q8N2R0 312 aa10.82□□□□□ -0.68
RAB5C-206ENST00000550406 OR51D1Q8NGF3 324 aa10.82□□□□□ -0.68
RAB5C-206ENST00000550406 OR8B3Q8NGG8 313 aa10.82□□□□□ -0.68
RAB5C-206ENST00000550406 DACT3Q96B18 629 aaPredicted RBP10.82□□□□□ -0.68
RAB5C-206ENST00000550406 OR8B2Q96RD0 313 aa10.82□□□□□ -0.68
RAB5C-206ENST00000550406 S100A13Q99584 98 aa10.82□□□□□ -0.68
RAB5C-206ENST00000550406 SHARPINQ9H0F6 387 aa10.82□□□□□ -0.68
RAB5C-206ENST00000550406 GHRLQ9UBU3 117 aa10.82□□□□□ -0.68
RAB5C-206ENST00000550406 STEAP1Q9UHE8 339 aa10.82□□□□□ -0.68
RAB5C-206ENST00000550406 ST3GAL6Q9Y274 331 aa10.82□□□□□ -0.68
RAB5C-206ENST00000550406 POLR3KQ9Y2Y1 108 aaPredicted RBP10.82□□□□□ -0.68
RAB5C-206ENST00000550406 CEPT1Q9Y6K0 416 aa10.82□□□□□ -0.68
RAB5C-206ENST00000550406 ZANQ9Y493 2812 aa10.81□□□□□ -0.68
RAB5C-206ENST00000550406 A0A0A6YYD4 124 aa10.81□□□□□ -0.68
RAB5C-206ENST00000550406 TMEM272A0A1B0GTI8 110 aa10.81□□□□□ -0.68
RAB5C-206ENST00000550406 NKX6-3A6NJ46 265 aa10.81□□□□□ -0.68
RAB5C-206ENST00000550406 C22orf46C9J442 243 aa10.81□□□□□ -0.68
RAB5C-206ENST00000550406 K7N7A8 449 aa10.81□□□□□ -0.68
RAB5C-206ENST00000550406 AIPO00170 330 aa10.81□□□□□ -0.68
RAB5C-206ENST00000550406 SH2D1BO14796 132 aa10.81□□□□□ -0.68
RAB5C-206ENST00000550406 GEMIN2O14893 280 aaKnown RBP10.81□□□□□ -0.68
RAB5C-206ENST00000550406 ZNF780AO75290 641 aaPredicted RBP10.81□□□□□ -0.68
RAB5C-206ENST00000550406 CRTAPO75718 401 aaPredicted RBP10.81□□□□□ -0.68
RAB5C-206ENST00000550406 BPNT1O95861 308 aa10.81□□□□□ -0.68
RAB5C-206ENST00000550406 CSTBP04080 98 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms