RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 CENPEQ02224 2701 aa6.83□□□□□ -1.32
DEPDC4-207ENST00000549249 A0A1W2PQ09 198 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 METTL21EPA6NDL7 271 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 A6NLC8 198 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 A6NNC1 897 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 B9A039 149 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 PRSS44E7EML9 344 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 TRAPPC2LH3BP13 241 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 GABARAPH6UMI1 98 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 M0R233 179 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 GEMIN2O14893 280 aaKnown RBP6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 AKR7A2O43488 359 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 GSTZ1O43708 216 aaPredicted RBP6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 NOS1APO75052 506 aaPredicted RBP6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 ZNF780AO75290 641 aaPredicted RBP6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 TPPPO94811 219 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 CLDN1O95832 211 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 ACAA1P09110 424 aaPredicted RBP6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 CD3GP09693 182 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 HIST1H1DP16402 221 aaKnown RBP6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 GNB3P16520 340 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 PRKACAP17612 351 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 EGR1P18146 543 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 CPT2P23786 658 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 GABRR1P24046 479 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 CHATP28329 748 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 SNU13P55769 128 aaKnown RBP6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 TNFAIP6P98066 277 aaPredicted RBP6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 MZT1Q08AG7 82 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 PDCD1Q15116 288 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 TAF9Q16594 264 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 ZNF181Q2M3W8 571 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 NHLRC3Q5JS37 347 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 LCE3BQ5TA77 95 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 RAB12Q6IQ22 244 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 MOGAT3Q86VF5 341 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 TGIF2LYQ8IUE0 185 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 OR8H2Q8N162 312 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 MUC15Q8N387 334 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 Q8N402 240 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 CELF2-AS1Q8N7Q2 184 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 OR56B1Q8NGI3 324 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 OR52I2Q8NH67 350 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 WFDC12Q8WWY7 111 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 SEH1LQ96EE3 360 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 MRPS24Q96EL2 167 aaKnown RBP6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 ARHGAP5-AS1Q96IT6 56 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 URM1Q9BTM9 101 aaKnown RBP6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 PECRQ9BY49 303 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 HES4Q9HCC6 221 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 PALMDQ9NP74 551 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 C1orf123Q9NWV4 160 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 DCAF16Q9NXF7 216 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 RABL2AQ9UBK7 228 aaPredicted RBP6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 IL19Q9UHD0 177 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 ZDHHC8Q9ULC8 765 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 TBC1D24Q9ULP9 559 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 RABL2BQ9UNT1 228 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 ST3GAL6Q9Y274 331 aa6.82□□□□□ -1.32
DEPDC4-207ENST00000549249 FAM221AA4D161 298 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 MEIS3P1A6NDR6 274 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 TMEM235A6NFC5 223 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 VSTM5A8MXK1 200 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 SRRM5B3KS81 715 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 HS3ST1O14792 307 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 SSX5O60225 188 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 SCGNO76038 276 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 CYB5AP00167 134 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 CD8AP01732 235 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 CHRM2P08172 466 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 SOD3P08294 240 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 MELTFP08582 738 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 DANCRP0C864 163 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 DUSP1P28562 367 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 BLVRBP30043 206 aaPredicted RBP6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 CFHR2P36980 270 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 SRP9P49458 86 aaKnown RBP6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 GMFBP60983 142 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 CCL8P80075 99 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 PITPNAQ00169 270 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 CDNFQ49AH0 187 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 Q6P435 159 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 C16orf87Q6PH81 154 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 ACP7Q6ZNF0 438 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 Q6ZTK2 550 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 C6orf201Q7Z4U5 140 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 DTX2Q86UW9 622 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 FAM58AQ8N1B3 248 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 GCSAMQ8N6F7 178 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 CHST4Q8NCG5 386 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 GPX8Q8TED1 209 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 LRRC29Q8WV35 223 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 NUDCD2Q8WVJ2 157 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 ST8SIA4Q92187 359 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 EMG1Q92979 244 aaKnown RBP6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 FBXW5Q969U6 566 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 PHF21AQ96BD5 680 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 RAB3CQ96E17 227 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 KRTAP4-12Q9BQ66 201 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms