RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 ORC6Q9Y5N6 252 aa3.1□□□□□ -1.91
APAF1-208ENST00000549007 hCG_38984A0A1B0GV85 526 aa3.1□□□□□ -1.91
APAF1-208ENST00000549007 LOC102725191A0A1B0GVB3 256 aa3.1□□□□□ -1.91
APAF1-208ENST00000549007 RNF222A6NCQ9 220 aa3.1□□□□□ -1.91
APAF1-208ENST00000549007 SURF4O15260 269 aa3.1□□□□□ -1.91
APAF1-208ENST00000549007 RENP00797 406 aa3.1□□□□□ -1.91
APAF1-208ENST00000549007 IGHMP01871 453 aa3.1□□□□□ -1.91
APAF1-208ENST00000549007 HOXB6P17509 224 aaKnown RBP3.1□□□□□ -1.91
APAF1-208ENST00000549007 SPI1P17947 270 aa3.1□□□□□ -1.91
APAF1-208ENST00000549007 AADACP22760 399 aa3.1□□□□□ -1.91
APAF1-208ENST00000549007 POU3F4P49335 361 aa3.1□□□□□ -1.91
APAF1-208ENST00000549007 CDK5Q00535 292 aa3.1□□□□□ -1.91
APAF1-208ENST00000549007 COX10Q12887 443 aa3.1□□□□□ -1.91
APAF1-208ENST00000549007 CLEC18BQ6UXF7 455 aa3.1□□□□□ -1.91
APAF1-208ENST00000549007 ADAMTSL5Q6ZMM2 481 aa3.1□□□□□ -1.91
APAF1-208ENST00000549007 MDP1Q86V88 176 aa3.1□□□□□ -1.91
APAF1-208ENST00000549007 SKA3Q8IX90 412 aa3.1□□□□□ -1.91
APAF1-208ENST00000549007 OR1K1Q8NGR3 316 aa3.1□□□□□ -1.91
APAF1-208ENST00000549007 CNIH3Q8TBE1 160 aa3.1□□□□□ -1.91
APAF1-208ENST00000549007 RNASE6Q93091 150 aaKnown RBP3.1□□□□□ -1.91
APAF1-208ENST00000549007 RBP7Q96R05 134 aa3.1□□□□□ -1.91
APAF1-208ENST00000549007 NDUFAF3Q9BU61 184 aa3.1□□□□□ -1.91
APAF1-208ENST00000549007 USE1Q9NZ43 259 aa3.1□□□□□ -1.91
APAF1-208ENST00000549007 POLR1DQ9Y2S0 133 aa3.1□□□□□ -1.91
APAF1-208ENST00000549007 GMPPBQ9Y5P6 360 aa3.1□□□□□ -1.91
APAF1-208ENST00000549007 DCHS2Q6V1P9 2916 aa3.1□□□□□ -1.91
APAF1-208ENST00000549007 IGLV1-36A0A0B4J1U3 117 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 TUBAL3A6NHL2 446 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 A6NIZ1 184 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 M0R1B8 84 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 CASQ2O14958 399 aaPredicted RBP3.09□□□□□ -1.91
APAF1-208ENST00000549007 ARPC3O15145 178 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 MAGEB4O15481 346 aaPredicted RBP3.09□□□□□ -1.91
APAF1-208ENST00000549007 IGKV2-30P06310 120 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 COX5AP20674 150 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 C4BPBP20851 252 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 FHITP49789 147 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 IDH3GP51553 393 aaPredicted RBP3.09□□□□□ -1.91
APAF1-208ENST00000549007 RAP1BP61224 184 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 RAP1AP62834 184 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 APOFQ13790 326 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 GABRA6Q16445 453 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 SLX4IPQ5VYV7 408 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 TTC23Q5W5X9 447 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 CATSPERDQ86XM0 798 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 RFLNBQ8N5W9 214 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 WDR31Q8NA23 367 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 C11orf40Q8WZ69 217 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 NRGNQ92686 78 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 NABP1Q96AH0 204 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 TBX5Q99593 518 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 TMEM204Q9BSN7 226 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 GABARAPL3Q9BY60 117 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 NDEL1Q9GZM8 345 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 ELOVL3Q9HB03 270 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 B3GAT2Q9NPZ5 323 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 CMC2Q9NRP2 79 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 TMEM38BQ9NVV0 291 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 IMPAD1Q9NX62 359 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 ZNF226Q9NYT6 803 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 N6AMT1Q9Y5N5 214 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 HRNRQ86YZ3 2850 aaPredicted RBP3.09□□□□□ -1.91
APAF1-208ENST00000549007 PLCE1Q9P212 2302 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 UNC79Q9P2D8 2635 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 SETXQ7Z333 2677 aaKnown RBP3.09□□□□□ -1.91
APAF1-208ENST00000549007 A0A1W2PS18 150 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 METTL21EPA6NDL7 271 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 ZNF99A8MXY4 864 aaPredicted RBP3.09□□□□□ -1.91
APAF1-208ENST00000549007 PRR23D1E9PI22 279 aaPredicted RBP3.09□□□□□ -1.91
APAF1-208ENST00000549007 RER1O15258 196 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 ENTPD6O75354 484 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 KHDRBS3O75525 346 aaKnown RBP3.09□□□□□ -1.91
APAF1-208ENST00000549007 IFNGP01579 166 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 PRR23D2P0DMB1 279 aaPredicted RBP3.09□□□□□ -1.91
APAF1-208ENST00000549007 ZNF3P17036 446 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 CCNOP22674 350 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 ANOS1P23352 680 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 FMO3P31513 532 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 ESRRGP62508 458 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 IL5RAQ01344 420 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 MRPL28Q13084 256 aaKnown RBP3.09□□□□□ -1.91
APAF1-208ENST00000549007 HIST3H3Q16695 136 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 C12orf73Q69YU5 71 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 RPL13AP3Q6NVV1 102 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 ZNF774Q6NX45 483 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 ERI1Q8IV48 349 aaKnown RBP3.09□□□□□ -1.91
APAF1-208ENST00000549007 SLC22A24Q8N4F4 322 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 FAM89BQ8N5H3 189 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 FBXO17Q96EF6 278 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 AMELYQ99218 206 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 PAPOLGQ9BWT3 736 aaKnown RBP3.09□□□□□ -1.91
APAF1-208ENST00000549007 MRPL22Q9NWU5 206 aaKnown RBP3.09□□□□□ -1.91
APAF1-208ENST00000549007 FZR1Q9UM11 496 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 LRP12Q9Y561 859 aa3.09□□□□□ -1.91
APAF1-208ENST00000549007 CELSR2Q9HCU4 2923 aa3.09□□□□□ -1.92
APAF1-208ENST00000549007 HCFC1P51610 2035 aa3.09□□□□□ -1.92
APAF1-208ENST00000549007 LOC100130705A0A1B0GUX0 176 aa3.09□□□□□ -1.92
APAF1-208ENST00000549007 A0A1W2PPR1 153 aa3.09□□□□□ -1.92
APAF1-208ENST00000549007 CCDC182A6NF36 153 aa3.09□□□□□ -1.92
APAF1-208ENST00000549007 OR5H1A6NKK0 313 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms