RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 VTCN1Q7Z7D3 282 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 SLC13A5Q86YT5 568 aaPredicted RBP2.6□□□□□ -1.99
PTCH1-216ENST00000548379 KRT222Q8N1A0 295 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 LIX1Q8N485 282 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 Q8N9W7 124 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 PLPP5Q8NEB5 264 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 ACTL9Q8TC94 416 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 ACTRT1Q8TDG2 376 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 CD300LFQ8TDQ1 290 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 RNASE6Q93091 150 aaKnown RBP2.6□□□□□ -1.99
PTCH1-216ENST00000548379 FAM104AQ969W3 186 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 OR2A5Q96R48 311 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 MRPL37Q9BZE1 423 aaKnown RBP2.6□□□□□ -1.99
PTCH1-216ENST00000548379 SLC25A39Q9BZJ4 359 aaPredicted RBP2.6□□□□□ -1.99
PTCH1-216ENST00000548379 PCBD2Q9H0N5 130 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 OR51M1Q9H341 326 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 TRIM45Q9H8W5 580 aaPredicted RBP2.6□□□□□ -1.99
PTCH1-216ENST00000548379 LYRM4Q9HD34 91 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 FGF20Q9NP95 211 aaPredicted RBP2.6□□□□□ -1.99
PTCH1-216ENST00000548379 LZTFL1Q9NQ48 299 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 LYARQ9NX58 379 aaKnown RBP2.6□□□□□ -1.99
PTCH1-216ENST00000548379 PTTG3PQ9NZH4 202 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 STK38LQ9Y2H1 464 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 YARS2Q9Y2Z4 477 aaKnown RBP2.6□□□□□ -1.99
PTCH1-216ENST00000548379 HYOU1Q9Y4L1 999 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 WSB1Q9Y6I7 421 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 COL12A1Q99715 3063 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 USP9YO00507 2555 aaPredicted RBP2.6□□□□□ -1.99
PTCH1-216ENST00000548379 BSNQ9UPA5 3926 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 FBN2P35556 2912 aa2.6□□□□□ -1.99
PTCH1-216ENST00000548379 ZFC3H1O60293 1989 aaKnown RBP2.6□□□□□ -1.99
PTCH1-216ENST00000548379 USP9XQ93008 2570 aaPredicted RBP2.59□□□□□ -1.99
PTCH1-216ENST00000548379 PTPN13Q12923 2485 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 KCNE1BA0A087WTH5 132 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 TRGV5A0A0B4J1U4 118 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 A0A0B4J2A0 478 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 DYNC1I1O14576 645 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 XKRYO14609 159 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 EIF3HO15372 352 aaKnown RBP eCLIP2.59□□□□□ -1.99
PTCH1-216ENST00000548379 RDH16O75452 317 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 UTS2O95399 124 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 GYPCP04921 128 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 IFNA16P05015 189 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 CNR1P21554 472 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 RPS3P23396 243 aaKnown RBP eCLIP2.59□□□□□ -1.99
PTCH1-216ENST00000548379 RRM2P31350 389 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 SERPINB5P36952 375 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 BCAP31P51572 246 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 NCBP2P52298 156 aaKnown RBP eCLIP2.59□□□□□ -1.99
PTCH1-216ENST00000548379 MLF1P58340 268 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 RAB10P61026 200 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 SARNPP82979 210 aaKnown RBP2.59□□□□□ -1.99
PTCH1-216ENST00000548379 IRF8Q02556 426 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 TMEM183BQ1AE95 376 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 CCSMST1Q4G0I0 132 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 DEFB134Q4QY38 66 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 LY6G6FQ5SQ64 297 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 Q6P435 159 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 C16orf47Q6ZP98 133 aaPredicted RBP2.59□□□□□ -1.99
PTCH1-216ENST00000548379 RTL4Q6ZR62 310 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 TMEM183AQ8IXX5 376 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 PDIK1LQ8N165 341 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 STPG2Q8N412 459 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 UBL4BQ8N7F7 174 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 ARIH2OSQ8N7S6 290 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 ZFP62Q8NB50 900 aaPredicted RBP2.59□□□□□ -1.99
PTCH1-216ENST00000548379 WFDC11Q8NEX6 87 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 OR10R2Q8NGX6 335 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 RHEBL1Q8TAI7 183 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 MITD1Q8WV92 249 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 TMEM158Q8WZ71 300 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 IL22RA2Q969J5 263 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 PIK3IP1Q96FE7 263 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 DUS3LQ96G46 650 aaKnown RBP2.59□□□□□ -1.99
PTCH1-216ENST00000548379 ZNF414Q96IQ9 312 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 WFIKKN1Q96NZ8 548 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 PRAP1Q96NZ9 151 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 ATP5SQ99766 215 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 SMR3AQ99954 134 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 GABARAPL3Q9BY60 117 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 TSGA10Q9BZW7 698 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 CDC42EP4Q9H3Q1 356 aaKnown RBP2.59□□□□□ -1.99
PTCH1-216ENST00000548379 SLCO1B3Q9NPD5 702 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 IFNKQ9P0W0 207 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 ZNF629Q9UEG4 869 aaPredicted RBP2.59□□□□□ -1.99
PTCH1-216ENST00000548379 SHPKQ9UHJ6 478 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 BOKQ9UMX3 212 aaPredicted RBP2.59□□□□□ -1.99
PTCH1-216ENST00000548379 RHBDD3Q9Y3P4 386 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 SLC22A7Q9Y694 548 aa2.59□□□□□ -1.99
PTCH1-216ENST00000548379 TET2Q6N021 2002 aaPredicted RBP2.59□□□□□ -2
PTCH1-216ENST00000548379 OTOGQ6ZRI0 2925 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 LRP4O75096 1905 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 CSMD1Q96PZ7 3565 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 TLN1Q9Y490 2541 aaKnown RBP2.58□□□□□ -2
PTCH1-216ENST00000548379 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.58□□□□□ -2
PTCH1-216ENST00000548379 NBPF19A0A087WUL8 3843 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 UQCRHLA0A096LP55 91 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 IGKV1-8A0A0C4DH67 115 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 LOC100653049A0A140TA62 436 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 ZNF860A6NHJ4 632 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms