RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 NDUFB11Q9NX14 153 aa13.93□□□□□ -0.18
CCDC38-203ENST00000546803 RPUSD1Q9UJJ7 312 aaKnown RBP13.93□□□□□ -0.18
CCDC38-203ENST00000546803 AUP1Q9Y679 476 aa13.93□□□□□ -0.18
CCDC38-203ENST00000546803 MAGEA13PA6NCF6 341 aa13.92□□□□□ -0.18
CCDC38-203ENST00000546803 CCRL2O00421 344 aa13.92□□□□□ -0.18
CCDC38-203ENST00000546803 HAND1O96004 215 aa13.92□□□□□ -0.18
CCDC38-203ENST00000546803 PPIAL4GP0DN37 164 aa13.92□□□□□ -0.18
CCDC38-203ENST00000546803 NDUFB7P17568 137 aa13.92□□□□□ -0.18
CCDC38-203ENST00000546803 SRMP19623 302 aa13.92□□□□□ -0.18
CCDC38-203ENST00000546803 SRP14P37108 136 aaKnown RBP13.92□□□□□ -0.18
CCDC38-203ENST00000546803 OR3A4PP47883 348 aa13.92□□□□□ -0.18
CCDC38-203ENST00000546803 CAPZA1P52907 286 aa13.92□□□□□ -0.18
CCDC38-203ENST00000546803 RIPPLY3P57055 190 aa13.92□□□□□ -0.18
CCDC38-203ENST00000546803 FGF12P61328 243 aa13.92□□□□□ -0.18
CCDC38-203ENST00000546803 RSU1Q15404 277 aa13.92□□□□□ -0.18
CCDC38-203ENST00000546803 FAM27D1Q5T7N8 215 aa13.92□□□□□ -0.18
CCDC38-203ENST00000546803 C1QL2Q7Z5L3 287 aa13.92□□□□□ -0.18
CCDC38-203ENST00000546803 JAGN1Q8N5M9 183 aa13.92□□□□□ -0.18
CCDC38-203ENST00000546803 Q8NFD4 153 aa13.92□□□□□ -0.18
CCDC38-203ENST00000546803 C8orf46Q8TAG6 207 aa13.92□□□□□ -0.18
CCDC38-203ENST00000546803 FOXRED1Q96CU9 486 aaPredicted RBP13.92□□□□□ -0.18
CCDC38-203ENST00000546803 S100A13Q99584 98 aa13.92□□□□□ -0.18
CCDC38-203ENST00000546803 UQCC2Q9BRT2 126 aa13.92□□□□□ -0.18
CCDC38-203ENST00000546803 DCTN5Q9BTE1 182 aa13.92□□□□□ -0.18
CCDC38-203ENST00000546803 SLITRK2Q9H156 845 aa13.92□□□□□ -0.18
CCDC38-203ENST00000546803 METTL9Q9H1A3 318 aa13.92□□□□□ -0.18
CCDC38-203ENST00000546803 CNTD2Q9H8S5 307 aa13.92□□□□□ -0.18
CCDC38-203ENST00000546803 ELL3Q9HB65 397 aaPredicted RBP13.92□□□□□ -0.18
CCDC38-203ENST00000546803 IL36GQ9NZH8 169 aa13.92□□□□□ -0.18
CCDC38-203ENST00000546803 OPN4Q9UHM6 478 aa13.92□□□□□ -0.18
CCDC38-203ENST00000546803 YLPM1P49750 1951 aaKnown RBP13.91□□□□□ -0.18
CCDC38-203ENST00000546803 A0A087WXM4 84 aa13.91□□□□□ -0.18
CCDC38-203ENST00000546803 TRBV23-1A0A0A0MS06 115 aa13.91□□□□□ -0.18
CCDC38-203ENST00000546803 K7N7A8 449 aa13.91□□□□□ -0.18
CCDC38-203ENST00000546803 SH2D1BO14796 132 aa13.91□□□□□ -0.18
CCDC38-203ENST00000546803 ZNF780AO75290 641 aaPredicted RBP13.91□□□□□ -0.18
CCDC38-203ENST00000546803 AVPP01185 164 aa13.91□□□□□ -0.18
CCDC38-203ENST00000546803 FAM157CP0CG43 387 aa13.91□□□□□ -0.18
CCDC38-203ENST00000546803 SRD5A1P18405 259 aa13.91□□□□□ -0.18
CCDC38-203ENST00000546803 GALP22466 123 aa13.91□□□□□ -0.18
CCDC38-203ENST00000546803 CEBPDP49716 269 aaPredicted RBP13.91□□□□□ -0.18
CCDC38-203ENST00000546803 GP2P55259 537 aaKnown RBP13.91□□□□□ -0.18
CCDC38-203ENST00000546803 FABP5Q01469 135 aa13.91□□□□□ -0.18
CCDC38-203ENST00000546803 COL10A1Q03692 680 aa13.91□□□□□ -0.18
CCDC38-203ENST00000546803 GPR176Q14439 515 aa13.91□□□□□ -0.18
CCDC38-203ENST00000546803 SYT6Q5T7P8 510 aaPredicted RBP13.91□□□□□ -0.18
CCDC38-203ENST00000546803 C1orf229Q6ZS94 237 aaPredicted RBP13.91□□□□□ -0.18
CCDC38-203ENST00000546803 FGFRL1Q8N441 504 aa13.91□□□□□ -0.18
CCDC38-203ENST00000546803 LY6G5BQ8NDX9 201 aa13.91□□□□□ -0.18
CCDC38-203ENST00000546803 OR5D13Q8NGL4 314 aa13.91□□□□□ -0.18
CCDC38-203ENST00000546803 PPP1R35Q8TAP8 253 aa13.91□□□□□ -0.18
CCDC38-203ENST00000546803 NANPQ8TBE9 248 aa13.91□□□□□ -0.18
CCDC38-203ENST00000546803 H1FXQ92522 213 aaKnown RBP13.91□□□□□ -0.18
CCDC38-203ENST00000546803 SNX22Q96L94 193 aa13.91□□□□□ -0.18
CCDC38-203ENST00000546803 PPIL3Q9H2H8 161 aaKnown RBP13.91□□□□□ -0.18
CCDC38-203ENST00000546803 IL36RNQ9UBH0 155 aa13.91□□□□□ -0.18
CCDC38-203ENST00000546803 METRNQ9UJH8 293 aa13.91□□□□□ -0.18
CCDC38-203ENST00000546803 ING4Q9UNL4 249 aa13.91□□□□□ -0.18
CCDC38-203ENST00000546803 GSTK1Q9Y2Q3 226 aa13.91□□□□□ -0.18
CCDC38-203ENST00000546803 MTORP42345 2549 aa13.91□□□□□ -0.18
CCDC38-203ENST00000546803 TEP1Q99973 2627 aaKnown RBP13.9□□□□□ -0.18
CCDC38-203ENST00000546803 ZNF737O75373 536 aa13.9□□□□□ -0.18
CCDC38-203ENST00000546803 CSTBP04080 98 aaKnown RBP13.9□□□□□ -0.18
CCDC38-203ENST00000546803 TK1P04183 234 aa13.9□□□□□ -0.18
CCDC38-203ENST00000546803 CALCBP10092 127 aa13.9□□□□□ -0.18
CCDC38-203ENST00000546803 HOXB4P17483 251 aaPredicted RBP13.9□□□□□ -0.18
CCDC38-203ENST00000546803 GLT8D1Q68CQ7 371 aa13.9□□□□□ -0.18
CCDC38-203ENST00000546803 CD200R1LQ6Q8B3 271 aa13.9□□□□□ -0.18
CCDC38-203ENST00000546803 IL17RELQ6ZVW7 336 aa13.9□□□□□ -0.18
CCDC38-203ENST00000546803 LRRTM1Q86UE6 522 aa13.9□□□□□ -0.18
CCDC38-203ENST00000546803 LYPD6Q86Y78 171 aa13.9□□□□□ -0.18
CCDC38-203ENST00000546803 ASCC1Q8N9N2 400 aaKnown RBP13.9□□□□□ -0.18
CCDC38-203ENST00000546803 TSPAN14Q8NG11 270 aa13.9□□□□□ -0.18
CCDC38-203ENST00000546803 OR51T1Q8NGJ9 327 aa13.9□□□□□ -0.18
CCDC38-203ENST00000546803 TBC1D15Q8TC07 691 aa13.9□□□□□ -0.18
CCDC38-203ENST00000546803 ZNF696Q9H7X3 374 aa13.9□□□□□ -0.18
CCDC38-203ENST00000546803 VCX3AQ9NNX9 186 aa13.9□□□□□ -0.18
CCDC38-203ENST00000546803 EXOSC4Q9NPD3 245 aaKnown RBP13.9□□□□□ -0.18
CCDC38-203ENST00000546803 MRPS28Q9Y2Q9 187 aaKnown RBP13.9□□□□□ -0.18
CCDC38-203ENST00000546803 MALRD1Q5VYJ5 2156 aa13.9□□□□□ -0.18
CCDC38-203ENST00000546803 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.89□□□□□ -0.19
CCDC38-203ENST00000546803 TRDV1A0A1B0GX56 115 aa13.89□□□□□ -0.19
CCDC38-203ENST00000546803 CDRT1O95170 752 aa13.89□□□□□ -0.19
CCDC38-203ENST00000546803 HTR3BO95264 441 aa13.89□□□□□ -0.19
CCDC38-203ENST00000546803 ADRA2CP18825 462 aa13.89□□□□□ -0.19
CCDC38-203ENST00000546803 LMO1P25800 156 aa13.89□□□□□ -0.19
CCDC38-203ENST00000546803 DUSP1P28562 367 aa13.89□□□□□ -0.19
CCDC38-203ENST00000546803 SNU13P55769 128 aaKnown RBP13.89□□□□□ -0.19
CCDC38-203ENST00000546803 SCGB2A2Q13296 93 aa13.89□□□□□ -0.19
CCDC38-203ENST00000546803 IL13RA2Q14627 380 aa13.89□□□□□ -0.19
CCDC38-203ENST00000546803 OR8H2Q8N162 312 aa13.89□□□□□ -0.19
CCDC38-203ENST00000546803 CHST4Q8NCG5 386 aa13.89□□□□□ -0.19
CCDC38-203ENST00000546803 MUL1Q969V5 352 aa13.89□□□□□ -0.19
CCDC38-203ENST00000546803 UPRTQ96BW1 309 aa13.89□□□□□ -0.19
CCDC38-203ENST00000546803 NKX3-1Q99801 234 aaPredicted RBP13.89□□□□□ -0.19
CCDC38-203ENST00000546803 GHRLQ9UBU3 117 aa13.89□□□□□ -0.19
CCDC38-203ENST00000546803 KPTNQ9Y664 436 aa13.89□□□□□ -0.19
CCDC38-203ENST00000546803 TMEM82A0PJX8 343 aa13.88□□□□□ -0.19
CCDC38-203ENST00000546803 OR2H2O95918 312 aa13.88□□□□□ -0.19
CCDC38-203ENST00000546803 CD37P11049 281 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms