RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 ISPDA4D126 451 aa7.19□□□□□ -1.26
VPS29-203ENST00000546588 TMEM14DPA8MWL7 114 aa7.19□□□□□ -1.26
VPS29-203ENST00000546588 C16orf97H3BN30 126 aa7.19□□□□□ -1.26
VPS29-203ENST00000546588 GSTZ1O43708 216 aaPredicted RBP7.19□□□□□ -1.26
VPS29-203ENST00000546588 GMDSO60547 372 aa7.19□□□□□ -1.26
VPS29-203ENST00000546588 HPGDSO60760 199 aa7.19□□□□□ -1.26
VPS29-203ENST00000546588 UPK1BO75841 260 aa7.19□□□□□ -1.26
VPS29-203ENST00000546588 NGFP01138 241 aa7.19□□□□□ -1.26
VPS29-203ENST00000546588 EIF4EP06730 217 aaKnown RBP7.19□□□□□ -1.26
VPS29-203ENST00000546588 LIPFP07098 398 aa7.19□□□□□ -1.26
VPS29-203ENST00000546588 KITLGP21583 273 aa7.19□□□□□ -1.26
VPS29-203ENST00000546588 BMP5P22003 454 aa7.19□□□□□ -1.26
VPS29-203ENST00000546588 AZGP1P25311 298 aaKnown RBP7.19□□□□□ -1.26
VPS29-203ENST00000546588 SERPINF1P36955 418 aa7.19□□□□□ -1.26
VPS29-203ENST00000546588 EIF2B2P49770 351 aaKnown RBP7.19□□□□□ -1.26
VPS29-203ENST00000546588 AP2S1P53680 142 aaPredicted RBP7.19□□□□□ -1.26
VPS29-203ENST00000546588 UCP2P55851 309 aa7.19□□□□□ -1.26
VPS29-203ENST00000546588 ADORA2A-AS1P86434 159 aa7.19□□□□□ -1.26
VPS29-203ENST00000546588 NAAAQ02083 359 aa7.19□□□□□ -1.26
VPS29-203ENST00000546588 TFF3Q07654 80 aa7.19□□□□□ -1.26
VPS29-203ENST00000546588 TAB1Q15750 504 aa7.19□□□□□ -1.26
VPS29-203ENST00000546588 RNF151Q2KHN1 245 aa7.19□□□□□ -1.26
VPS29-203ENST00000546588 ZNF181Q2M3W8 571 aa7.19□□□□□ -1.26
VPS29-203ENST00000546588 IDNKQ5T6J7 187 aa7.19□□□□□ -1.26
VPS29-203ENST00000546588 CNIH2Q6PI25 160 aa7.19□□□□□ -1.26
VPS29-203ENST00000546588 C3P1Q6ZMU1 363 aa7.19□□□□□ -1.26
VPS29-203ENST00000546588 LUZP2Q86TE4 346 aa7.19□□□□□ -1.26
VPS29-203ENST00000546588 FTMTQ8N4E7 242 aa7.19□□□□□ -1.26
VPS29-203ENST00000546588 ZNF808Q8N4W9 903 aaPredicted RBP7.19□□□□□ -1.26
VPS29-203ENST00000546588 NUP37Q8NFH4 326 aa7.19□□□□□ -1.26
VPS29-203ENST00000546588 PXT1Q8NFP0 134 aa7.19□□□□□ -1.26
VPS29-203ENST00000546588 OR4D6Q8NGJ1 314 aa7.19□□□□□ -1.26
VPS29-203ENST00000546588 OR13C9Q8NGT0 318 aa7.19□□□□□ -1.26
VPS29-203ENST00000546588 OR5H6Q8NGV6 325 aa7.19□□□□□ -1.26
VPS29-203ENST00000546588 DEDD2Q8WXF8 326 aa7.19□□□□□ -1.26
VPS29-203ENST00000546588 S100PBPQ96BU1 408 aa7.19□□□□□ -1.26
VPS29-203ENST00000546588 MARS2Q96GW9 593 aaKnown RBP7.19□□□□□ -1.26
VPS29-203ENST00000546588 GON7Q9BXV9 100 aa7.19□□□□□ -1.26
VPS29-203ENST00000546588 ACTR6Q9GZN1 396 aa7.19□□□□□ -1.26
VPS29-203ENST00000546588 HEYLQ9NQ87 328 aaPredicted RBP7.19□□□□□ -1.26
VPS29-203ENST00000546588 NPAP1Q9NZP6 1156 aa7.19□□□□□ -1.26
VPS29-203ENST00000546588 STARD10Q9Y365 291 aa7.19□□□□□ -1.26
VPS29-203ENST00000546588 MPC1Q9Y5U8 109 aa7.19□□□□□ -1.26
VPS29-203ENST00000546588 USP24Q9UPU5 2620 aa7.18□□□□□ -1.26
VPS29-203ENST00000546588 A0A1B0GUH1 482 aa7.18□□□□□ -1.26
VPS29-203ENST00000546588 A0A1W2PRX2 142 aa7.18□□□□□ -1.26
VPS29-203ENST00000546588 PQLC2LA1A4F0 135 aa7.18□□□□□ -1.26
VPS29-203ENST00000546588 A4D1N5 150 aa7.18□□□□□ -1.26
VPS29-203ENST00000546588 FOXI3A8MTJ6 420 aaPredicted RBP7.18□□□□□ -1.26
VPS29-203ENST00000546588 RGS5O15539 181 aa7.18□□□□□ -1.26
VPS29-203ENST00000546588 SCGNO76038 276 aa7.18□□□□□ -1.26
VPS29-203ENST00000546588 MBP02144 154 aa7.18□□□□□ -1.26
VPS29-203ENST00000546588 ZNF250P15622 560 aa7.18□□□□□ -1.26
VPS29-203ENST00000546588 SELEP16581 610 aa7.18□□□□□ -1.26
VPS29-203ENST00000546588 PI3P19957 117 aa7.18□□□□□ -1.26
VPS29-203ENST00000546588 MPZP25189 248 aa7.18□□□□□ -1.26
VPS29-203ENST00000546588 CALCRP30988 508 aa7.18□□□□□ -1.26
VPS29-203ENST00000546588 ZNF93P35789 620 aaPredicted RBP7.18□□□□□ -1.26
VPS29-203ENST00000546588 CDKN1BP46527 198 aa7.18□□□□□ -1.26
VPS29-203ENST00000546588 FHITP49789 147 aa7.18□□□□□ -1.26
VPS29-203ENST00000546588 GNG10P50151 68 aa7.18□□□□□ -1.26
VPS29-203ENST00000546588 MMP15P51511 669 aa7.18□□□□□ -1.26
VPS29-203ENST00000546588 IDH3GP51553 393 aaPredicted RBP7.18□□□□□ -1.26
VPS29-203ENST00000546588 FUT6P51993 359 aa7.18□□□□□ -1.26
VPS29-203ENST00000546588 MRPS10P82664 201 aaKnown RBP7.18□□□□□ -1.26
VPS29-203ENST00000546588 KISS1Q15726 138 aa7.18□□□□□ -1.26
VPS29-203ENST00000546588 FAM189A2Q15884 450 aa7.18□□□□□ -1.26
VPS29-203ENST00000546588 RAB11BQ15907 218 aa7.18□□□□□ -1.26
VPS29-203ENST00000546588 CEACAM21Q3KPI0 293 aa7.18□□□□□ -1.26
VPS29-203ENST00000546588 TMEM255AQ5JRV8 349 aa7.18□□□□□ -1.26
VPS29-203ENST00000546588 NHLRC3Q5JS37 347 aa7.18□□□□□ -1.26
VPS29-203ENST00000546588 HACD4Q5VWC8 232 aa7.18□□□□□ -1.26
VPS29-203ENST00000546588 SAXO1Q8IYX7 474 aa7.18□□□□□ -1.26
VPS29-203ENST00000546588 FAM89BQ8N5H3 189 aa7.18□□□□□ -1.26
VPS29-203ENST00000546588 SAMD12Q8N8I0 201 aa7.18□□□□□ -1.26
VPS29-203ENST00000546588 ZSCAN4Q8NAM6 433 aaPredicted RBP7.18□□□□□ -1.26
VPS29-203ENST00000546588 SETD6Q8TBK2 473 aa7.18□□□□□ -1.26
VPS29-203ENST00000546588 CD300LFQ8TDQ1 290 aa7.18□□□□□ -1.26
VPS29-203ENST00000546588 C15orf40Q8WUR7 153 aa7.18□□□□□ -1.26
VPS29-203ENST00000546588 HPSE2Q8WWQ2 592 aa7.18□□□□□ -1.26
VPS29-203ENST00000546588 FAM3DQ96BQ1 224 aa7.18□□□□□ -1.26
VPS29-203ENST00000546588 C14orf79Q96F83 325 aa7.18□□□□□ -1.26
VPS29-203ENST00000546588 DIRAS2Q96HU8 199 aa7.18□□□□□ -1.26
VPS29-203ENST00000546588 RHOFQ9HBH0 211 aa7.18□□□□□ -1.26
VPS29-203ENST00000546588 CDH20Q9HBT6 801 aa7.18□□□□□ -1.26
VPS29-203ENST00000546588 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.18□□□□□ -1.26
VPS29-203ENST00000546588 COMMD3Q9UBI1 195 aa7.18□□□□□ -1.26
VPS29-203ENST00000546588 NOP16Q9Y3C1 178 aaKnown RBP7.18□□□□□ -1.26
VPS29-203ENST00000546588 IGKV1-27A0A075B6S5 117 aa7.17□□□□□ -1.26
VPS29-203ENST00000546588 TRGV8A0A0C4DH27 118 aa7.17□□□□□ -1.26
VPS29-203ENST00000546588 TMEM272A0A1B0GTI8 110 aa7.17□□□□□ -1.26
VPS29-203ENST00000546588 A0A1W2PN81 502 aa7.17□□□□□ -1.26
VPS29-203ENST00000546588 SMIM30A4D0T7 59 aa7.17□□□□□ -1.26
VPS29-203ENST00000546588 FABP12A6NFH5 140 aa7.17□□□□□ -1.26
VPS29-203ENST00000546588 OR5B21A6NL26 309 aa7.17□□□□□ -1.26
VPS29-203ENST00000546588 CD300LBA8K4G0 201 aa7.17□□□□□ -1.26
VPS29-203ENST00000546588 B5MCH6 92 aa7.17□□□□□ -1.26
VPS29-203ENST00000546588 EEF1E1-BLOC1S5C9J1V9 151 aa7.17□□□□□ -1.26
VPS29-203ENST00000546588 EEF1E1O43324 174 aaKnown RBP7.17□□□□□ -1.26
VPS29-203ENST00000546588 XRCC3O43542 346 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms