RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 TRIM61Q5EBN2 209 aa12.8□□□□□ -0.36
HOXC11-202ENST00000546378 C1orf100Q5SVJ3 147 aa12.8□□□□□ -0.36
HOXC11-202ENST00000546378 NSUN5P2Q63ZY6 315 aa12.8□□□□□ -0.36
HOXC11-202ENST00000546378 TCEAL6Q6IPX3 200 aa12.8□□□□□ -0.36
HOXC11-202ENST00000546378 ZNF774Q6NX45 483 aa12.8□□□□□ -0.36
HOXC11-202ENST00000546378 GUSBP11Q6P575 273 aa12.8□□□□□ -0.36
HOXC11-202ENST00000546378 IL34Q6ZMJ4 242 aa12.8□□□□□ -0.36
HOXC11-202ENST00000546378 ZNF695Q8IW36 515 aa12.8□□□□□ -0.36
HOXC11-202ENST00000546378 CCDC54Q8NEL0 328 aa12.8□□□□□ -0.36
HOXC11-202ENST00000546378 OR5C1Q8NGR4 320 aa12.8□□□□□ -0.36
HOXC11-202ENST00000546378 EDARADDQ8WWZ3 215 aa12.8□□□□□ -0.36
HOXC11-202ENST00000546378 BORCS8Q96FH0 119 aa12.8□□□□□ -0.36
HOXC11-202ENST00000546378 KCNK17Q96T54 332 aa12.8□□□□□ -0.36
HOXC11-202ENST00000546378 GGACTQ9BVM4 153 aa12.8□□□□□ -0.36
HOXC11-202ENST00000546378 TLCD2A6NGC4 264 aa12.8□□□□□ -0.36
HOXC11-202ENST00000546378 A6NIZ1 184 aa12.8□□□□□ -0.36
HOXC11-202ENST00000546378 IL2RAP01589 272 aa12.8□□□□□ -0.36
HOXC11-202ENST00000546378 RAP1BP61224 184 aa12.8□□□□□ -0.36
HOXC11-202ENST00000546378 ISXQ2M1V0 245 aa12.8□□□□□ -0.36
HOXC11-202ENST00000546378 ZNF468Q5VIY5 522 aaPredicted RBP12.8□□□□□ -0.36
HOXC11-202ENST00000546378 FIP1L1Q6UN15 594 aaKnown RBP12.8□□□□□ -0.36
HOXC11-202ENST00000546378 C1orf210Q8IVY1 113 aa12.8□□□□□ -0.36
HOXC11-202ENST00000546378 POC1AQ8NBT0 407 aa12.8□□□□□ -0.36
HOXC11-202ENST00000546378 SLC17A5Q9NRA2 495 aa12.8□□□□□ -0.36
HOXC11-202ENST00000546378 GAB2Q9UQC2 676 aa12.8□□□□□ -0.36
HOXC11-202ENST00000546378 IFNL4K9M1U5 179 aa12.79□□□□□ -0.36
HOXC11-202ENST00000546378 DUX1O43812 170 aa12.79□□□□□ -0.36
HOXC11-202ENST00000546378 JTBO76095 146 aa12.79□□□□□ -0.36
HOXC11-202ENST00000546378 MMP16P51512 607 aa12.79□□□□□ -0.36
HOXC11-202ENST00000546378 RPL23AP62750 156 aaKnown RBP12.79□□□□□ -0.36
HOXC11-202ENST00000546378 NKX6-1P78426 367 aaPredicted RBP12.79□□□□□ -0.36
HOXC11-202ENST00000546378 BATFQ16520 125 aa12.79□□□□□ -0.36
HOXC11-202ENST00000546378 OR2T2Q6IF00 324 aa12.79□□□□□ -0.36
HOXC11-202ENST00000546378 BEND4Q6ZU67 534 aa12.79□□□□□ -0.36
HOXC11-202ENST00000546378 DNASE2BQ8WZ79 361 aa12.79□□□□□ -0.36
HOXC11-202ENST00000546378 GPR27Q9NS67 375 aa12.79□□□□□ -0.36
HOXC11-202ENST00000546378 KPTNQ9Y664 436 aa12.79□□□□□ -0.36
HOXC11-202ENST00000546378 USF3Q68DE3 2245 aa12.79□□□□□ -0.36
HOXC11-202ENST00000546378 IGHV1OR21-1A0A087WYE8 117 aa12.79□□□□□ -0.36
HOXC11-202ENST00000546378 M0R135 149 aa12.79□□□□□ -0.36
HOXC11-202ENST00000546378 LDLRAD4O15165 306 aa12.79□□□□□ -0.36
HOXC11-202ENST00000546378 MT-ND4LP03901 98 aa12.79□□□□□ -0.36
HOXC11-202ENST00000546378 CHRM2P08172 466 aa12.79□□□□□ -0.36
HOXC11-202ENST00000546378 HSD11B2P80365 405 aa12.79□□□□□ -0.36
HOXC11-202ENST00000546378 C21orf62-AS1Q17RA5 79 aa12.79□□□□□ -0.36
HOXC11-202ENST00000546378 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.79□□□□□ -0.36
HOXC11-202ENST00000546378 THNSL2Q86YJ6 484 aa12.79□□□□□ -0.36
HOXC11-202ENST00000546378 THRSPQ92748 146 aa12.79□□□□□ -0.36
HOXC11-202ENST00000546378 RDH5Q92781 318 aa12.79□□□□□ -0.36
HOXC11-202ENST00000546378 ZNF799Q96GE5 643 aa12.79□□□□□ -0.36
HOXC11-202ENST00000546378 SCGB3A2Q96PL1 93 aa12.79□□□□□ -0.36
HOXC11-202ENST00000546378 OCSTAMPQ9BR26 566 aa12.79□□□□□ -0.36
HOXC11-202ENST00000546378 ULBP2Q9BZM5 246 aa12.79□□□□□ -0.36
HOXC11-202ENST00000546378 IL36RNQ9UBH0 155 aa12.79□□□□□ -0.36
HOXC11-202ENST00000546378 ST3GAL6Q9Y274 331 aa12.79□□□□□ -0.36
HOXC11-202ENST00000546378 GTF3C1Q12789 2109 aa12.79□□□□□ -0.36
HOXC11-202ENST00000546378 CCDC187A0A096LP49 1063 aa12.79□□□□□ -0.36
HOXC11-202ENST00000546378 TMEM14DPA8MWL7 114 aa12.79□□□□□ -0.36
HOXC11-202ENST00000546378 TSPAN2O60636 221 aa12.79□□□□□ -0.36
HOXC11-202ENST00000546378 CHATP28329 748 aa12.79□□□□□ -0.36
HOXC11-202ENST00000546378 EIF2S3P41091 472 aaKnown RBP12.79□□□□□ -0.36
HOXC11-202ENST00000546378 SLC35A1P78382 337 aa12.79□□□□□ -0.36
HOXC11-202ENST00000546378 C17orf67Q0P5P2 114 aa12.79□□□□□ -0.36
HOXC11-202ENST00000546378 SSX9Q7RTT3 188 aa12.79□□□□□ -0.36
HOXC11-202ENST00000546378 SLC35G3Q8N808 338 aa12.79□□□□□ -0.36
HOXC11-202ENST00000546378 ZNF488Q96MN9 340 aa12.79□□□□□ -0.36
HOXC11-202ENST00000546378 DOK5Q9P104 306 aa12.79□□□□□ -0.36
HOXC11-202ENST00000546378 ARFGEF3Q5TH69 2177 aa12.78□□□□□ -0.36
HOXC11-202ENST00000546378 EIF1BO60739 113 aaKnown RBP12.78□□□□□ -0.36
HOXC11-202ENST00000546378 IFNA17P01571 189 aa12.78□□□□□ -0.36
HOXC11-202ENST00000546378 EIF1P41567 113 aaKnown RBP12.78□□□□□ -0.36
HOXC11-202ENST00000546378 TAS2R46P59540 309 aa12.78□□□□□ -0.36
HOXC11-202ENST00000546378 SURF2Q15527 256 aaPredicted RBP12.78□□□□□ -0.36
HOXC11-202ENST00000546378 PHYHD1Q5SRE7 291 aa12.78□□□□□ -0.36
HOXC11-202ENST00000546378 PLCXD3Q63HM9 321 aa12.78□□□□□ -0.36
HOXC11-202ENST00000546378 SLC43A2Q8N370 569 aa12.78□□□□□ -0.36
HOXC11-202ENST00000546378 RAB39BQ96DA2 213 aa12.78□□□□□ -0.36
HOXC11-202ENST00000546378 ATG101Q9BSB4 218 aa12.78□□□□□ -0.36
HOXC11-202ENST00000546378 LRFN1Q9P244 771 aa12.78□□□□□ -0.36
HOXC11-202ENST00000546378 CARHSP1Q9Y2V2 147 aaKnown RBP12.78□□□□□ -0.36
HOXC11-202ENST00000546378 CUL9Q8IWT3 2517 aa12.78□□□□□ -0.36
HOXC11-202ENST00000546378 AP4M1O00189 453 aa12.78□□□□□ -0.36
HOXC11-202ENST00000546378 TNFSF11O14788 317 aa12.78□□□□□ -0.36
HOXC11-202ENST00000546378 IGKV3-11P04433 115 aa12.78□□□□□ -0.36
HOXC11-202ENST00000546378 IFNA4P05014 189 aa12.78□□□□□ -0.36
HOXC11-202ENST00000546378 FCGR3AP08637 254 aa12.78□□□□□ -0.36
HOXC11-202ENST00000546378 H2AFB1P0C5Y9 115 aa12.78□□□□□ -0.36
HOXC11-202ENST00000546378 GAMTQ14353 236 aa12.78□□□□□ -0.36
HOXC11-202ENST00000546378 SLC25A26Q70HW3 274 aa12.78□□□□□ -0.36
HOXC11-202ENST00000546378 PLXDC1Q8IUK5 500 aa12.78□□□□□ -0.36
HOXC11-202ENST00000546378 ARRDC1Q8N5I2 433 aa12.78□□□□□ -0.36
HOXC11-202ENST00000546378 DTWD2Q8NBA8 298 aa12.78□□□□□ -0.36
HOXC11-202ENST00000546378 NTNG2Q96CW9 530 aa12.78□□□□□ -0.36
HOXC11-202ENST00000546378 MED13LQ71F56 2210 aa12.78□□□□□ -0.36
HOXC11-202ENST00000546378 NSG1A0A0A6YYJ2 146 aa12.77□□□□□ -0.36
HOXC11-202ENST00000546378 H3BQ15 152 aa12.77□□□□□ -0.36
HOXC11-202ENST00000546378 CXCL1P09341 107 aa12.77□□□□□ -0.36
HOXC11-202ENST00000546378 HTR5AP47898 357 aa12.77□□□□□ -0.36
HOXC11-202ENST00000546378 SULT1A2P50226 295 aa12.77□□□□□ -0.36
HOXC11-202ENST00000546378 DLK1P80370 383 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms