RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 DEFA6Q01524 100 aa7.6□□□□□ -1.19
YBX3-218ENST00000546298 ZNF91Q05481 1191 aa7.6□□□□□ -1.19
YBX3-218ENST00000546298 MRPL28Q13084 256 aaKnown RBP7.6□□□□□ -1.19
YBX3-218ENST00000546298 KPNB1Q14974 876 aaKnown RBP7.6□□□□□ -1.19
YBX3-218ENST00000546298 HERPUD1Q15011 391 aa7.6□□□□□ -1.19
YBX3-218ENST00000546298 GRK1Q15835 563 aa7.6□□□□□ -1.19
YBX3-218ENST00000546298 ZIK1Q3SY52 487 aaPredicted RBP7.6□□□□□ -1.19
YBX3-218ENST00000546298 ZBTB49Q6ZSB9 765 aa7.6□□□□□ -1.19
YBX3-218ENST00000546298 CBR4Q8N4T8 237 aa7.6□□□□□ -1.19
YBX3-218ENST00000546298 OR11H6Q8NGC7 330 aa7.6□□□□□ -1.19
YBX3-218ENST00000546298 RPS4Y2Q8TD47 263 aa7.6□□□□□ -1.19
YBX3-218ENST00000546298 HAVCR2Q8TDQ0 301 aa7.6□□□□□ -1.19
YBX3-218ENST00000546298 FGGYQ96C11 551 aa7.6□□□□□ -1.19
YBX3-218ENST00000546298 ADAT3Q96EY9 351 aaPredicted RBP7.6□□□□□ -1.19
YBX3-218ENST00000546298 AJUBAQ96IF1 538 aa7.6□□□□□ -1.19
YBX3-218ENST00000546298 MBOAT4Q96T53 435 aa7.6□□□□□ -1.19
YBX3-218ENST00000546298 C9orf16Q9BUW7 83 aa7.6□□□□□ -1.19
YBX3-218ENST00000546298 RHOFQ9HBH0 211 aa7.6□□□□□ -1.19
YBX3-218ENST00000546298 FRRS1LQ9P0K9 344 aa7.6□□□□□ -1.19
YBX3-218ENST00000546298 PITPNC1Q9UKF7 332 aa7.6□□□□□ -1.19
YBX3-218ENST00000546298 EXOGQ9Y2C4 368 aaKnown RBP7.6□□□□□ -1.19
YBX3-218ENST00000546298 GMPPBQ9Y5P6 360 aa7.6□□□□□ -1.19
YBX3-218ENST00000546298 LINC00312Q9Y6C7 94 aa7.6□□□□□ -1.19
YBX3-218ENST00000546298 IGKV1-9A0A0C4DH69 117 aa7.59□□□□□ -1.19
YBX3-218ENST00000546298 TMEM82A0PJX8 343 aa7.59□□□□□ -1.19
YBX3-218ENST00000546298 H3BNX3 289 aa7.59□□□□□ -1.19
YBX3-218ENST00000546298 J3QRE1 110 aa7.59□□□□□ -1.19
YBX3-218ENST00000546298 SH2D1BO14796 132 aa7.59□□□□□ -1.19
YBX3-218ENST00000546298 KCNAB3O43448 404 aa7.59□□□□□ -1.19
YBX3-218ENST00000546298 MT-ND2P03891 347 aa7.59□□□□□ -1.19
YBX3-218ENST00000546298 CSF1P09603 554 aa7.59□□□□□ -1.19
YBX3-218ENST00000546298 IGHV1-8P0DP01 117 aa7.59□□□□□ -1.19
YBX3-218ENST00000546298 PRKACAP17612 351 aa7.59□□□□□ -1.19
YBX3-218ENST00000546298 ERP29P30040 261 aaKnown RBP7.59□□□□□ -1.19
YBX3-218ENST00000546298 PDZK1IP1Q13113 114 aa7.59□□□□□ -1.19
YBX3-218ENST00000546298 DYNC1I2Q13409 638 aaKnown RBP7.59□□□□□ -1.19
YBX3-218ENST00000546298 ALKBH1Q13686 389 aaKnown RBP7.59□□□□□ -1.19
YBX3-218ENST00000546298 GALEQ14376 348 aa7.59□□□□□ -1.19
YBX3-218ENST00000546298 EDDM3AQ14507 147 aa7.59□□□□□ -1.19
YBX3-218ENST00000546298 ZNF146Q15072 292 aa7.59□□□□□ -1.19
YBX3-218ENST00000546298 FAM189A2Q15884 450 aa7.59□□□□□ -1.19
YBX3-218ENST00000546298 MINOS1Q5TGZ0 78 aa7.59□□□□□ -1.19
YBX3-218ENST00000546298 ZNF626Q68DY1 528 aa7.59□□□□□ -1.19
YBX3-218ENST00000546298 OR52W1Q6IF63 320 aa7.59□□□□□ -1.19
YBX3-218ENST00000546298 LHFPL4Q7Z7J7 247 aa7.59□□□□□ -1.19
YBX3-218ENST00000546298 SAXO1Q8IYX7 474 aa7.59□□□□□ -1.19
YBX3-218ENST00000546298 SYS1Q8N2H4 156 aa7.59□□□□□ -1.19
YBX3-218ENST00000546298 ZNF676Q8N7Q3 588 aa7.59□□□□□ -1.19
YBX3-218ENST00000546298 OR13C3Q8NGS6 347 aa7.59□□□□□ -1.19
YBX3-218ENST00000546298 PELI1Q96FA3 418 aa7.59□□□□□ -1.19
YBX3-218ENST00000546298 C4orf36Q96KX1 117 aa7.59□□□□□ -1.19
YBX3-218ENST00000546298 OPALINQ96PE5 141 aa7.59□□□□□ -1.19
YBX3-218ENST00000546298 HMG20AQ9NP66 347 aa7.59□□□□□ -1.19
YBX3-218ENST00000546298 EXOSC4Q9NPD3 245 aaKnown RBP7.59□□□□□ -1.19
YBX3-218ENST00000546298 INPP5EQ9NRR6 644 aa7.59□□□□□ -1.19
YBX3-218ENST00000546298 RBFOX1Q9NWB1 397 aaKnown RBP7.59□□□□□ -1.19
YBX3-218ENST00000546298 SESN1Q9Y6P5 492 aa7.59□□□□□ -1.19
YBX3-218ENST00000546298 MINOS1-NBL1R4GNA1 71 aa7.59□□□□□ -1.19
YBX3-218ENST00000546298 TRGV10A0A0A0MS01 117 aa7.58□□□□□ -1.2
YBX3-218ENST00000546298 OR4C45A6NMZ5 311 aa7.58□□□□□ -1.2
YBX3-218ENST00000546298 ODF3BA8MYP8 253 aa7.58□□□□□ -1.2
YBX3-218ENST00000546298 ALX3O95076 343 aa7.58□□□□□ -1.2
YBX3-218ENST00000546298 CCDC159P0C7I6 412 aa7.58□□□□□ -1.2
YBX3-218ENST00000546298 BCL3P20749 454 aa7.58□□□□□ -1.2
YBX3-218ENST00000546298 DUSP1P28562 367 aa7.58□□□□□ -1.2
YBX3-218ENST00000546298 NPBWR2P48146 333 aa7.58□□□□□ -1.2
YBX3-218ENST00000546298 DYNLT3P51808 116 aa7.58□□□□□ -1.2
YBX3-218ENST00000546298 EFNB2P52799 333 aa7.58□□□□□ -1.2
YBX3-218ENST00000546298 GBX2P52951 348 aaPredicted RBP7.58□□□□□ -1.2
YBX3-218ENST00000546298 P2RX3P56373 397 aa7.58□□□□□ -1.2
YBX3-218ENST00000546298 NANOS3P60323 173 aaKnown RBP7.58□□□□□ -1.2
YBX3-218ENST00000546298 RAB40BQ12829 278 aa7.58□□□□□ -1.2
YBX3-218ENST00000546298 IL18R1Q13478 541 aa7.58□□□□□ -1.2
YBX3-218ENST00000546298 SSX2Q16385 188 aa7.58□□□□□ -1.2
YBX3-218ENST00000546298 PDLIM3Q53GG5 364 aaPredicted RBP7.58□□□□□ -1.2
YBX3-218ENST00000546298 KLHL22Q53GT1 634 aa7.58□□□□□ -1.2
YBX3-218ENST00000546298 CRIP3Q6Q6R5 217 aa7.58□□□□□ -1.2
YBX3-218ENST00000546298 TRAPPC6BQ86SZ2 158 aa7.58□□□□□ -1.2
YBX3-218ENST00000546298 LHFPL3Q86UP9 236 aa7.58□□□□□ -1.2
YBX3-218ENST00000546298 CHST4Q8NCG5 386 aa7.58□□□□□ -1.2
YBX3-218ENST00000546298 OR4S1Q8NGB4 309 aa7.58□□□□□ -1.2
YBX3-218ENST00000546298 OR52N4Q8NGI2 321 aa7.58□□□□□ -1.2
YBX3-218ENST00000546298 OR5D14Q8NGL3 314 aa7.58□□□□□ -1.2
YBX3-218ENST00000546298 OR13C9Q8NGT0 318 aa7.58□□□□□ -1.2
YBX3-218ENST00000546298 RHOXF1Q8NHV9 184 aa7.58□□□□□ -1.2
YBX3-218ENST00000546298 NDNFQ8TB73 568 aa7.58□□□□□ -1.2
YBX3-218ENST00000546298 PIFOQ8TCI5 191 aa7.58□□□□□ -1.2
YBX3-218ENST00000546298 LGALS12Q96DT0 336 aa7.58□□□□□ -1.2
YBX3-218ENST00000546298 CPNE2Q96FN4 548 aaPredicted RBP7.58□□□□□ -1.2
YBX3-218ENST00000546298 NKX3-1Q99801 234 aaPredicted RBP7.58□□□□□ -1.2
YBX3-218ENST00000546298 ALG8Q9BVK2 526 aa7.58□□□□□ -1.2
YBX3-218ENST00000546298 COMMD4Q9H0A8 199 aa7.58□□□□□ -1.2
YBX3-218ENST00000546298 ZCCHC4Q9H5U6 513 aa7.58□□□□□ -1.2
YBX3-218ENST00000546298 TCF19Q9Y242 345 aa7.58□□□□□ -1.2
YBX3-218ENST00000546298 GSTK1Q9Y2Q3 226 aa7.58□□□□□ -1.2
YBX3-218ENST00000546298 SIGLEC9Q9Y336 463 aa7.58□□□□□ -1.2
YBX3-218ENST00000546298 UBE2J1Q9Y385 318 aaPredicted RBP7.58□□□□□ -1.2
YBX3-218ENST00000546298 RPL36Q9Y3U8 105 aaKnown RBP7.58□□□□□ -1.2
YBX3-218ENST00000546298 TMEM212A6NML5 194 aa7.57□□□□□ -1.2
YBX3-218ENST00000546298 E9PQ18 207 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms