RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 RNASEK-C17orf49H0YIS7 233 aa9.74□□□□□ -0.85
YBX3-217ENST00000546164 SPRY1O43609 319 aaPredicted RBP9.74□□□□□ -0.85
YBX3-217ENST00000546164 HAND1O96004 215 aa9.74□□□□□ -0.85
YBX3-217ENST00000546164 IGKV1D-12P01611 117 aa9.74□□□□□ -0.85
YBX3-217ENST00000546164 CD1AP06126 327 aa9.74□□□□□ -0.85
YBX3-217ENST00000546164 BCL3P20749 454 aa9.74□□□□□ -0.85
YBX3-217ENST00000546164 RPL31P62899 125 aaKnown RBP9.74□□□□□ -0.85
YBX3-217ENST00000546164 GUCA2AQ02747 115 aa9.74□□□□□ -0.85
YBX3-217ENST00000546164 BAMBIQ13145 260 aa9.74□□□□□ -0.85
YBX3-217ENST00000546164 RIPK1Q13546 671 aa9.74□□□□□ -0.85
YBX3-217ENST00000546164 BLMHQ13867 455 aa9.74□□□□□ -0.85
YBX3-217ENST00000546164 DEFB112Q30KQ8 113 aa9.74□□□□□ -0.85
YBX3-217ENST00000546164 YIF1BQ5BJH7 314 aa9.74□□□□□ -0.85
YBX3-217ENST00000546164 SPIN3Q5JUX0 258 aa9.74□□□□□ -0.85
YBX3-217ENST00000546164 C6orf141Q5SZD1 244 aa9.74□□□□□ -0.85
YBX3-217ENST00000546164 RUSC1-AS1Q66K80 236 aa9.74□□□□□ -0.85
YBX3-217ENST00000546164 NCR3LG1Q68D85 454 aa9.74□□□□□ -0.85
YBX3-217ENST00000546164 RNF144BQ7Z419 303 aa9.74□□□□□ -0.85
YBX3-217ENST00000546164 STX19Q8N4C7 294 aa9.74□□□□□ -0.85
YBX3-217ENST00000546164 GHSRQ92847 366 aa9.74□□□□□ -0.85
YBX3-217ENST00000546164 TMEM106AQ96A25 262 aa9.74□□□□□ -0.85
YBX3-217ENST00000546164 RFT1Q96AA3 541 aa9.74□□□□□ -0.85
YBX3-217ENST00000546164 CPNE2Q96FN4 548 aaPredicted RBP9.74□□□□□ -0.85
YBX3-217ENST00000546164 SNX22Q96L94 193 aa9.74□□□□□ -0.85
YBX3-217ENST00000546164 SPACA5Q96QH8 159 aa9.74□□□□□ -0.85
YBX3-217ENST00000546164 ANKRD60Q9BZ19 345 aa9.74□□□□□ -0.85
YBX3-217ENST00000546164 SIRT7Q9NRC8 400 aa9.74□□□□□ -0.85
YBX3-217ENST00000546164 C19orf12Q9NSK7 152 aa9.74□□□□□ -0.85
YBX3-217ENST00000546164 TMEM82A0PJX8 343 aa9.73□□□□□ -0.85
YBX3-217ENST00000546164 TMEM89A2RUT3 159 aa9.73□□□□□ -0.85
YBX3-217ENST00000546164 H0YHG0 523 aa9.73□□□□□ -0.85
YBX3-217ENST00000546164 MYL12BO14950 172 aa9.73□□□□□ -0.85
YBX3-217ENST00000546164 ANGPTL7O43827 346 aa9.73□□□□□ -0.85
YBX3-217ENST00000546164 GPX5O75715 221 aa9.73□□□□□ -0.85
YBX3-217ENST00000546164 ALDOBP05062 364 aa9.73□□□□□ -0.85
YBX3-217ENST00000546164 CDK1P06493 297 aa9.73□□□□□ -0.85
YBX3-217ENST00000546164 RNASE1P07998 156 aaKnown RBP9.73□□□□□ -0.85
YBX3-217ENST00000546164 HCKP08631 526 aa9.73□□□□□ -0.85
YBX3-217ENST00000546164 MYF6P23409 242 aa9.73□□□□□ -0.85
YBX3-217ENST00000546164 SOX2P48431 317 aa9.73□□□□□ -0.85
YBX3-217ENST00000546164 HSPA13P48723 471 aa9.73□□□□□ -0.85
YBX3-217ENST00000546164 COMPP49747 757 aaPredicted RBP9.73□□□□□ -0.85
YBX3-217ENST00000546164 WNT4P56705 351 aa9.73□□□□□ -0.85
YBX3-217ENST00000546164 RPS11P62280 158 aaKnown RBP eCLIP9.73□□□□□ -0.85
YBX3-217ENST00000546164 BDH1Q02338 343 aa9.73□□□□□ -0.85
YBX3-217ENST00000546164 ACSM1Q08AH1 577 aa9.73□□□□□ -0.85
YBX3-217ENST00000546164 SLC9A3R2Q15599 337 aa9.73□□□□□ -0.85
YBX3-217ENST00000546164 TMEM200BQ69YZ2 307 aa9.73□□□□□ -0.85
YBX3-217ENST00000546164 FAM185AQ8N0U4 392 aa9.73□□□□□ -0.85
YBX3-217ENST00000546164 OR8H2Q8N162 312 aa9.73□□□□□ -0.85
YBX3-217ENST00000546164 C11orf42Q8N5U0 333 aa9.73□□□□□ -0.85
YBX3-217ENST00000546164 TMEM86BQ8N661 226 aa9.73□□□□□ -0.85
YBX3-217ENST00000546164 NANOGP1Q8N7R0 232 aa9.73□□□□□ -0.85
YBX3-217ENST00000546164 ASCC1Q8N9N2 400 aaKnown RBP9.73□□□□□ -0.85
YBX3-217ENST00000546164 PXT1Q8NFP0 134 aa9.73□□□□□ -0.85
YBX3-217ENST00000546164 OR51A2Q8NGJ7 313 aa9.73□□□□□ -0.85
YBX3-217ENST00000546164 OR5D18Q8NGL1 313 aa9.73□□□□□ -0.85
YBX3-217ENST00000546164 OR5D13Q8NGL4 314 aa9.73□□□□□ -0.85
YBX3-217ENST00000546164 CDCA4Q9BXL8 241 aa9.73□□□□□ -0.85
YBX3-217ENST00000546164 TAS2R4Q9NYW5 299 aa9.73□□□□□ -0.85
YBX3-217ENST00000546164 IL36RNQ9UBH0 155 aa9.73□□□□□ -0.85
YBX3-217ENST00000546164 ERGIC3Q9Y282 383 aa9.73□□□□□ -0.85
YBX3-217ENST00000546164 PCDHGB5Q9Y5G0 923 aa9.73□□□□□ -0.85
YBX3-217ENST00000546164 MDFIC2A0A1B0GVS7 189 aa9.72□□□□□ -0.85
YBX3-217ENST00000546164 INMTO95050 263 aa9.72□□□□□ -0.85
YBX3-217ENST00000546164 PRKACAP17612 351 aa9.72□□□□□ -0.85
YBX3-217ENST00000546164 LMO1P25800 156 aa9.72□□□□□ -0.85
YBX3-217ENST00000546164 BMXP51813 675 aa9.72□□□□□ -0.85
YBX3-217ENST00000546164 UBE2E1P51965 193 aa9.72□□□□□ -0.85
YBX3-217ENST00000546164 SLC35A2P78381 396 aa9.72□□□□□ -0.85
YBX3-217ENST00000546164 MEF2CQ06413 473 aaPredicted RBP9.72□□□□□ -0.85
YBX3-217ENST00000546164 Q499Y3 187 aa9.72□□□□□ -0.85
YBX3-217ENST00000546164 ELP2Q6IA86 826 aa9.72□□□□□ -0.85
YBX3-217ENST00000546164 IZUMO2Q6UXV1 221 aa9.72□□□□□ -0.85
YBX3-217ENST00000546164 ASCL4Q6XD76 172 aa9.72□□□□□ -0.85
YBX3-217ENST00000546164 Q6YL49 198 aa9.72□□□□□ -0.85
YBX3-217ENST00000546164 C17orf107Q6ZR85 190 aa9.72□□□□□ -0.85
YBX3-217ENST00000546164 GDPD3Q7L5L3 318 aa9.72□□□□□ -0.85
YBX3-217ENST00000546164 LDLRAD3Q86YD5 345 aa9.72□□□□□ -0.85
YBX3-217ENST00000546164 Q8NFD4 153 aa9.72□□□□□ -0.85
YBX3-217ENST00000546164 OR13C5Q8NGS8 318 aa9.72□□□□□ -0.85
YBX3-217ENST00000546164 MYDGFQ969H8 173 aa9.72□□□□□ -0.85
YBX3-217ENST00000546164 SLC25A28Q96A46 364 aa9.72□□□□□ -0.85
YBX3-217ENST00000546164 DUSP21Q9H596 190 aa9.72□□□□□ -0.85
YBX3-217ENST00000546164 TMEM138Q9NPI0 162 aa9.72□□□□□ -0.85
YBX3-217ENST00000546164 SCN3BQ9NY72 215 aa9.72□□□□□ -0.85
YBX3-217ENST00000546164 GLS2Q9UI32 602 aa9.72□□□□□ -0.85
YBX3-217ENST00000546164 TRBV5-7A0A0A0MS05 114 aa9.71□□□□□ -0.86
YBX3-217ENST00000546164 A0A0U1RQK1 487 aa9.71□□□□□ -0.86
YBX3-217ENST00000546164 hCG_1809904A0A1W2PP81 198 aa9.71□□□□□ -0.86
YBX3-217ENST00000546164 A0A1W2PPE2 198 aa9.71□□□□□ -0.86
YBX3-217ENST00000546164 A0A1W2PR64 198 aa9.71□□□□□ -0.86
YBX3-217ENST00000546164 A0A1W2PRV1 198 aa9.71□□□□□ -0.86
YBX3-217ENST00000546164 C17orf98A8MV24 154 aa9.71□□□□□ -0.86
YBX3-217ENST00000546164 GABRPO00591 440 aa9.71□□□□□ -0.86
YBX3-217ENST00000546164 SH2D1BO14796 132 aa9.71□□□□□ -0.86
YBX3-217ENST00000546164 MAGEB3O15480 346 aa9.71□□□□□ -0.86
YBX3-217ENST00000546164 HOXA3O43365 443 aaPredicted RBP9.71□□□□□ -0.86
YBX3-217ENST00000546164 PSPNO60542 156 aa9.71□□□□□ -0.86
YBX3-217ENST00000546164 RBP4P02753 201 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms