RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 ZNRF1Q8ND25 227 aa16.99■□□□□ 0.31
HMGA2-211ENST00000545998 Q8NFD4 153 aa16.99■□□□□ 0.31
HMGA2-211ENST00000545998 DACT3Q96B18 629 aaPredicted RBP16.99■□□□□ 0.31
HMGA2-211ENST00000545998 UQCC2Q9BRT2 126 aa16.99■□□□□ 0.31
HMGA2-211ENST00000545998 SEBOXQ9HB31 216 aaPredicted RBP16.99■□□□□ 0.31
HMGA2-211ENST00000545998 IL36GQ9NZH8 169 aa16.99■□□□□ 0.31
HMGA2-211ENST00000545998 NDUFB3O43676 98 aa16.98■□□□□ 0.31
HMGA2-211ENST00000545998 SMIM18P0DKX4 95 aa16.98■□□□□ 0.31
HMGA2-211ENST00000545998 CD37P11049 281 aa16.98■□□□□ 0.31
HMGA2-211ENST00000545998 JUNBP17275 347 aaPredicted RBP16.98■□□□□ 0.31
HMGA2-211ENST00000545998 RSU1Q15404 277 aa16.98■□□□□ 0.31
HMGA2-211ENST00000545998 LRRC10Q5BKY1 277 aa16.98■□□□□ 0.31
HMGA2-211ENST00000545998 SPIN3Q5JUX0 258 aa16.98■□□□□ 0.31
HMGA2-211ENST00000545998 FIP1L1Q6UN15 594 aaKnown RBP16.98■□□□□ 0.31
HMGA2-211ENST00000545998 ST8SIA4Q92187 359 aa16.98■□□□□ 0.31
HMGA2-211ENST00000545998 METTL9Q9H1A3 318 aa16.98■□□□□ 0.31
HMGA2-211ENST00000545998 ELL3Q9HB65 397 aaPredicted RBP16.98■□□□□ 0.31
HMGA2-211ENST00000545998 TMEM160Q9NX00 188 aa16.98■□□□□ 0.31
HMGA2-211ENST00000545998 STUB1Q9UNE7 303 aa16.98■□□□□ 0.31
HMGA2-211ENST00000545998 ING4Q9UNL4 249 aa16.98■□□□□ 0.31
HMGA2-211ENST00000545998 LOC105371242A0A075B767 164 aa16.98■□□□□ 0.31
HMGA2-211ENST00000545998 A0A0G2JMP0 313 aa16.98■□□□□ 0.31
HMGA2-211ENST00000545998 A0A0X1KG70 313 aa16.98■□□□□ 0.31
HMGA2-211ENST00000545998 C22orf46C9J442 243 aa16.98■□□□□ 0.31
HMGA2-211ENST00000545998 GATA3P23771 443 aa16.98■□□□□ 0.31
HMGA2-211ENST00000545998 MTNR1BP49286 362 aa16.98■□□□□ 0.31
HMGA2-211ENST00000545998 BMXP51813 675 aa16.98■□□□□ 0.31
HMGA2-211ENST00000545998 FGF12P61328 243 aa16.98■□□□□ 0.31
HMGA2-211ENST00000545998 C11orf91Q3C1V1 193 aa16.98■□□□□ 0.31
HMGA2-211ENST00000545998 CD276Q5ZPR3 534 aa16.98■□□□□ 0.31
HMGA2-211ENST00000545998 OR4M2Q8NGB6 313 aa16.98■□□□□ 0.31
HMGA2-211ENST00000545998 OR4D6Q8NGJ1 314 aa16.98■□□□□ 0.31
HMGA2-211ENST00000545998 OR10K1Q8NGX5 313 aa16.98■□□□□ 0.31
HMGA2-211ENST00000545998 GFI1Q99684 422 aa16.98■□□□□ 0.31
HMGA2-211ENST00000545998 SLC25A10Q9UBX3 287 aaPredicted RBP16.98■□□□□ 0.31
HMGA2-211ENST00000545998 GSTK1Q9Y2Q3 226 aa16.98■□□□□ 0.31
HMGA2-211ENST00000545998 MRPS28Q9Y2Q9 187 aaKnown RBP16.98■□□□□ 0.31
HMGA2-211ENST00000545998 CUBNO60494 3623 aa16.98■□□□□ 0.31
HMGA2-211ENST00000545998 IGHV2-70DA0A0C4DH43 119 aa16.97■□□□□ 0.31
HMGA2-211ENST00000545998 INAFM1C9JVW0 142 aa16.97■□□□□ 0.31
HMGA2-211ENST00000545998 HAND1O96004 215 aa16.97■□□□□ 0.31
HMGA2-211ENST00000545998 CHRM2P08172 466 aa16.97■□□□□ 0.31
HMGA2-211ENST00000545998 CD36P16671 472 aa16.97■□□□□ 0.31
HMGA2-211ENST00000545998 DUSP1P28562 367 aa16.97■□□□□ 0.31
HMGA2-211ENST00000545998 FGF9P31371 208 aaPredicted RBP16.97■□□□□ 0.31
HMGA2-211ENST00000545998 SNU13P55769 128 aaKnown RBP16.97■□□□□ 0.31
HMGA2-211ENST00000545998 CAV3P56539 151 aa16.97■□□□□ 0.31
HMGA2-211ENST00000545998 COL10A1Q03692 680 aa16.97■□□□□ 0.31
HMGA2-211ENST00000545998 DCAF12L2Q5VW00 463 aa16.97■□□□□ 0.31
HMGA2-211ENST00000545998 GLT8D1Q68CQ7 371 aa16.97■□□□□ 0.31
HMGA2-211ENST00000545998 C22orf42Q6IC83 251 aa16.97■□□□□ 0.31
HMGA2-211ENST00000545998 BTN2A1Q7KYR7 527 aa16.97■□□□□ 0.31
HMGA2-211ENST00000545998 RAB40AQ8WXH6 277 aa16.97■□□□□ 0.31
HMGA2-211ENST00000545998 FOXRED1Q96CU9 486 aaPredicted RBP16.97■□□□□ 0.31
HMGA2-211ENST00000545998 S100A13Q99584 98 aa16.97■□□□□ 0.31
HMGA2-211ENST00000545998 INSIG2Q9Y5U4 225 aa16.97■□□□□ 0.31
HMGA2-211ENST00000545998 TRAV1-2A0A0B4J238 106 aa16.96■□□□□ 0.31
HMGA2-211ENST00000545998 GPR37O15354 613 aa16.96■□□□□ 0.31
HMGA2-211ENST00000545998 CR1LQ2VPA4 569 aa16.96■□□□□ 0.31
HMGA2-211ENST00000545998 C1orf100Q5SVJ3 147 aa16.96■□□□□ 0.31
HMGA2-211ENST00000545998 GLIPR1L1Q6UWM5 242 aa16.96■□□□□ 0.31
HMGA2-211ENST00000545998 TMEM185AQ8NFB2 350 aa16.96■□□□□ 0.31
HMGA2-211ENST00000545998 OR51T1Q8NGJ9 327 aa16.96■□□□□ 0.31
HMGA2-211ENST00000545998 TBC1D15Q8TC07 691 aa16.96■□□□□ 0.31
HMGA2-211ENST00000545998 C1orf147Q96MC9 270 aaPredicted RBP16.96■□□□□ 0.31
HMGA2-211ENST00000545998 OR51E2Q9H255 320 aa16.96■□□□□ 0.31
HMGA2-211ENST00000545998 TXNL4BQ9NX01 149 aaKnown RBP16.96■□□□□ 0.31
HMGA2-211ENST00000545998 SHISA3A0PJX4 238 aa16.95■□□□□ 0.3
HMGA2-211ENST00000545998 ZNF780AO75290 641 aaPredicted RBP16.95■□□□□ 0.3
HMGA2-211ENST00000545998 ZNF737O75373 536 aa16.95■□□□□ 0.3
HMGA2-211ENST00000545998 ECDO95905 644 aaPredicted RBP16.95■□□□□ 0.3
HMGA2-211ENST00000545998 GADD45AP24522 165 aa16.95■□□□□ 0.3
HMGA2-211ENST00000545998 AWAT2Q6E213 333 aa16.95■□□□□ 0.3
HMGA2-211ENST00000545998 FAHD2BQ6P2I3 314 aaPredicted RBP16.95■□□□□ 0.3
HMGA2-211ENST00000545998 FAHD2AQ96GK7 314 aa16.95■□□□□ 0.3
HMGA2-211ENST00000545998 NUDT16L1Q9BRJ7 211 aaKnown RBP16.95■□□□□ 0.3
HMGA2-211ENST00000545998 TMPRSS13Q9BYE2 586 aa16.95■□□□□ 0.3
HMGA2-211ENST00000545998 EXOSC4Q9NPD3 245 aaKnown RBP16.95■□□□□ 0.3
HMGA2-211ENST00000545998 GLS2Q9UI32 602 aa16.95■□□□□ 0.3
HMGA2-211ENST00000545998 SSR3Q9UNL2 185 aa16.95■□□□□ 0.3
HMGA2-211ENST00000545998 AK6Q9Y3D8 172 aaKnown RBP16.95■□□□□ 0.3
HMGA2-211ENST00000545998 NAV3Q8IVL0 2385 aa16.95■□□□□ 0.3
HMGA2-211ENST00000545998 DSCAML1Q8TD84 2053 aa16.95■□□□□ 0.3
HMGA2-211ENST00000545998 KIR2DS1A0A191URI9 304 aa16.94■□□□□ 0.3
HMGA2-211ENST00000545998 J3QLI3 93 aa16.94■□□□□ 0.3
HMGA2-211ENST00000545998 K7N7A8 449 aa16.94■□□□□ 0.3
HMGA2-211ENST00000545998 SH2D1BO14796 132 aa16.94■□□□□ 0.3
HMGA2-211ENST00000545998 HTR3BO95264 441 aa16.94■□□□□ 0.3
HMGA2-211ENST00000545998 TK1P04183 234 aa16.94■□□□□ 0.3
HMGA2-211ENST00000545998 NDUFB7P17568 137 aa16.94■□□□□ 0.3
HMGA2-211ENST00000545998 SLC22A6Q4U2R8 563 aa16.94■□□□□ 0.3
HMGA2-211ENST00000545998 FAM120AOSQ5T036 256 aa16.94■□□□□ 0.3
HMGA2-211ENST00000545998 Q6P435 159 aa16.94■□□□□ 0.3
HMGA2-211ENST00000545998 FAM234AQ9H0X4 552 aa16.94■□□□□ 0.3
HMGA2-211ENST00000545998 RPUSD1Q9UJJ7 312 aaKnown RBP16.94■□□□□ 0.3
HMGA2-211ENST00000545998 TMEM82A0PJX8 343 aa16.94■□□□□ 0.3
HMGA2-211ENST00000545998 SLC22A1O15245 554 aa16.94■□□□□ 0.3
HMGA2-211ENST00000545998 ENSAO43768 121 aaKnown RBP16.94■□□□□ 0.3
HMGA2-211ENST00000545998 OR2H2O95918 312 aa16.94■□□□□ 0.3
HMGA2-211ENST00000545998 CSTBP04080 98 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms