RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 AUP1Q9Y679 476 aa10.35□□□□□ -0.75
ACTN1-206ENST00000544964 IGKV1-12A0A0C4DH73 117 aa10.34□□□□□ -0.75
ACTN1-206ENST00000544964 OOEPA6NGQ2 149 aa10.34□□□□□ -0.75
ACTN1-206ENST00000544964 LGALS8O00214 317 aa10.34□□□□□ -0.75
ACTN1-206ENST00000544964 TMPRSS2O15393 492 aa10.34□□□□□ -0.75
ACTN1-206ENST00000544964 CYB5AP00167 134 aa10.34□□□□□ -0.75
ACTN1-206ENST00000544964 IGKV1D-12P01611 117 aa10.34□□□□□ -0.75
ACTN1-206ENST00000544964 TFF1P04155 84 aa10.34□□□□□ -0.75
ACTN1-206ENST00000544964 BCL3P20749 454 aa10.34□□□□□ -0.75
ACTN1-206ENST00000544964 GALP22466 123 aa10.34□□□□□ -0.75
ACTN1-206ENST00000544964 PRTN3P24158 256 aa10.34□□□□□ -0.75
ACTN1-206ENST00000544964 FGF9P31371 208 aaPredicted RBP10.34□□□□□ -0.75
ACTN1-206ENST00000544964 NPBWR2P48146 333 aa10.34□□□□□ -0.75
ACTN1-206ENST00000544964 PRR31Q5SQ13 230 aa10.34□□□□□ -0.75
ACTN1-206ENST00000544964 MKXQ8IYA7 352 aa10.34□□□□□ -0.75
ACTN1-206ENST00000544964 OR5T2Q8NGG2 359 aa10.34□□□□□ -0.75
ACTN1-206ENST00000544964 CPNE2Q96FN4 548 aaPredicted RBP10.34□□□□□ -0.75
ACTN1-206ENST00000544964 CEP19Q96LK0 163 aa10.34□□□□□ -0.75
ACTN1-206ENST00000544964 GFI1Q99684 422 aa10.34□□□□□ -0.75
ACTN1-206ENST00000544964 NRIP2Q9BQI9 281 aa10.34□□□□□ -0.75
ACTN1-206ENST00000544964 TMEM246Q9BRR3 403 aa10.34□□□□□ -0.75
ACTN1-206ENST00000544964 CENPOQ9BU64 300 aa10.34□□□□□ -0.75
ACTN1-206ENST00000544964 ZNF747Q9BV97 191 aa10.34□□□□□ -0.75
ACTN1-206ENST00000544964 FUNDC2Q9BWH2 189 aa10.34□□□□□ -0.75
ACTN1-206ENST00000544964 TMEM165Q9HC07 324 aa10.34□□□□□ -0.75
ACTN1-206ENST00000544964 SCOCQ9UIL1 159 aa10.34□□□□□ -0.75
ACTN1-206ENST00000544964 ING4Q9UNL4 249 aa10.34□□□□□ -0.75
ACTN1-206ENST00000544964 VWFP04275 2813 aa10.34□□□□□ -0.75
ACTN1-206ENST00000544964 SMIM30A4D0T7 59 aa10.33□□□□□ -0.76
ACTN1-206ENST00000544964 MEGF11A6BM72 1044 aa10.33□□□□□ -0.76
ACTN1-206ENST00000544964 KCNAB3O43448 404 aa10.33□□□□□ -0.76
ACTN1-206ENST00000544964 AIREO43918 545 aa10.33□□□□□ -0.76
ACTN1-206ENST00000544964 NOS1APO75052 506 aaPredicted RBP10.33□□□□□ -0.76
ACTN1-206ENST00000544964 NXPH2O95156 264 aa10.33□□□□□ -0.76
ACTN1-206ENST00000544964 CDRT1O95170 752 aa10.33□□□□□ -0.76
ACTN1-206ENST00000544964 GYPAP02724 150 aa10.33□□□□□ -0.76
ACTN1-206ENST00000544964 WNT2P09544 360 aa10.33□□□□□ -0.76
ACTN1-206ENST00000544964 IGHV4-38-2P0DP08 117 aa10.33□□□□□ -0.76
ACTN1-206ENST00000544964 MYL9P24844 172 aa10.33□□□□□ -0.76
ACTN1-206ENST00000544964 TGFBR1P36897 503 aa10.33□□□□□ -0.76
ACTN1-206ENST00000544964 ERVK11-1P61568 191 aa10.33□□□□□ -0.76
ACTN1-206ENST00000544964 LSM3P62310 102 aaKnown RBP10.33□□□□□ -0.76
ACTN1-206ENST00000544964 PAX8Q06710 450 aa10.33□□□□□ -0.76
ACTN1-206ENST00000544964 ZNF404Q494X3 552 aa10.33□□□□□ -0.76
ACTN1-206ENST00000544964 ESCO2Q56NI9 601 aa10.33□□□□□ -0.76
ACTN1-206ENST00000544964 TEX36Q5VZQ5 186 aa10.33□□□□□ -0.76
ACTN1-206ENST00000544964 LYPD2Q6UXB3 125 aa10.33□□□□□ -0.76
ACTN1-206ENST00000544964 GPR141Q7Z602 305 aa10.33□□□□□ -0.76
ACTN1-206ENST00000544964 LYPD6Q86Y78 171 aa10.33□□□□□ -0.76
ACTN1-206ENST00000544964 FAM90A1Q86YD7 464 aa10.33□□□□□ -0.76
ACTN1-206ENST00000544964 NKAIN3Q8N8D7 197 aa10.33□□□□□ -0.76
ACTN1-206ENST00000544964 PNLDC1Q8NA58 520 aaKnown RBP10.33□□□□□ -0.76
ACTN1-206ENST00000544964 OR10K1Q8NGX5 313 aa10.33□□□□□ -0.76
ACTN1-206ENST00000544964 MRI1Q9BV20 369 aa10.33□□□□□ -0.76
ACTN1-206ENST00000544964 NAA50Q9GZZ1 169 aaKnown RBP10.33□□□□□ -0.76
ACTN1-206ENST00000544964 CNTD2Q9H8S5 307 aa10.33□□□□□ -0.76
ACTN1-206ENST00000544964 ELL3Q9HB65 397 aaPredicted RBP10.33□□□□□ -0.76
ACTN1-206ENST00000544964 SMURF1Q9HCE7 757 aa10.33□□□□□ -0.76
ACTN1-206ENST00000544964 RBFOX1Q9NWB1 397 aaKnown RBP10.33□□□□□ -0.76
ACTN1-206ENST00000544964 DNAJB11Q9UBS4 358 aa10.33□□□□□ -0.76
ACTN1-206ENST00000544964 OR5V1Q9UGF6 321 aa10.33□□□□□ -0.76
ACTN1-206ENST00000544964 GSTK1Q9Y2Q3 226 aa10.33□□□□□ -0.76
ACTN1-206ENST00000544964 SOX21Q9Y651 276 aaPredicted RBP10.33□□□□□ -0.76
ACTN1-206ENST00000544964 TRAV1-2A0A0B4J238 106 aa10.32□□□□□ -0.76
ACTN1-206ENST00000544964 TRAV38-1A0A0B4J264 116 aa10.32□□□□□ -0.76
ACTN1-206ENST00000544964 KDM4BO94953 1096 aa10.32□□□□□ -0.76
ACTN1-206ENST00000544964 SFTPBP07988 381 aa10.32□□□□□ -0.76
ACTN1-206ENST00000544964 RNASE1P07998 156 aaKnown RBP10.32□□□□□ -0.76
ACTN1-206ENST00000544964 ACAA1P09110 424 aaPredicted RBP10.32□□□□□ -0.76
ACTN1-206ENST00000544964 PTGFRP43088 359 aa10.32□□□□□ -0.76
ACTN1-206ENST00000544964 RPL5P46777 297 aaKnown RBP10.32□□□□□ -0.76
ACTN1-206ENST00000544964 SNU13P55769 128 aaKnown RBP10.32□□□□□ -0.76
ACTN1-206ENST00000544964 OR10A3P58181 314 aa10.32□□□□□ -0.76
ACTN1-206ENST00000544964 FOXL1Q12952 345 aa10.32□□□□□ -0.76
ACTN1-206ENST00000544964 MICBQ29980 383 aa10.32□□□□□ -0.76
ACTN1-206ENST00000544964 TIMM50Q3ZCQ8 353 aa10.32□□□□□ -0.76
ACTN1-206ENST00000544964 GPR107Q5VW38 600 aa10.32□□□□□ -0.76
ACTN1-206ENST00000544964 GLT8D1Q68CQ7 371 aa10.32□□□□□ -0.76
ACTN1-206ENST00000544964 RBMS3Q6XE24 437 aaKnown RBP10.32□□□□□ -0.76
ACTN1-206ENST00000544964 ACP7Q6ZNF0 438 aa10.32□□□□□ -0.76
ACTN1-206ENST00000544964 C9orf139Q6ZV77 190 aa10.32□□□□□ -0.76
ACTN1-206ENST00000544964 SAXO1Q8IYX7 474 aa10.32□□□□□ -0.76
ACTN1-206ENST00000544964 MUC20Q8N307 709 aaPredicted RBP10.32□□□□□ -0.76
ACTN1-206ENST00000544964 OR4D6Q8NGJ1 314 aa10.32□□□□□ -0.76
ACTN1-206ENST00000544964 TAF15Q92804 592 aaKnown RBP eCLIP10.32□□□□□ -0.76
ACTN1-206ENST00000544964 EMG1Q92979 244 aaKnown RBP10.32□□□□□ -0.76
ACTN1-206ENST00000544964 KCTD7Q96MP8 289 aa10.32□□□□□ -0.76
ACTN1-206ENST00000544964 SSBP3Q9BWW4 388 aaPredicted RBP10.32□□□□□ -0.76
ACTN1-206ENST00000544964 ZMAT3Q9HA38 289 aaKnown RBP10.32□□□□□ -0.76
ACTN1-206ENST00000544964 NLKQ9UBE8 527 aa10.32□□□□□ -0.76
ACTN1-206ENST00000544964 IL36RNQ9UBH0 155 aa10.32□□□□□ -0.76
ACTN1-206ENST00000544964 MRPS28Q9Y2Q9 187 aaKnown RBP10.32□□□□□ -0.76
ACTN1-206ENST00000544964 IGHV3OR16-10A0A075B7F0 116 aa10.31□□□□□ -0.76
ACTN1-206ENST00000544964 TRAV40A0A0B4J280 105 aa10.31□□□□□ -0.76
ACTN1-206ENST00000544964 IGHV2-70DA0A0C4DH43 119 aa10.31□□□□□ -0.76
ACTN1-206ENST00000544964 A0A1B0GW55 424 aa10.31□□□□□ -0.76
ACTN1-206ENST00000544964 OR2AT4A6NND4 320 aa10.31□□□□□ -0.76
ACTN1-206ENST00000544964 CLDN34H7C241 214 aa10.31□□□□□ -0.76
ACTN1-206ENST00000544964 PDCD5O14737 125 aa10.31□□□□□ -0.76
ACTN1-206ENST00000544964 HTR3BO95264 441 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms