RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 LRRC36Q1X8D7 754 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 YIF1BQ5BJH7 314 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 KLF17Q5JT82 389 aaPredicted RBP4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 DHRS7BQ6IAN0 325 aaPredicted RBP4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 BRD3OSQ6XYD6 125 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 SSX6Q7RTT6 188 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 TRAPPC6BQ86SZ2 158 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 WDR86Q86TI4 376 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 RTN4RL2Q86UN3 420 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 SATL1Q86VE3 508 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 ANGPTL5Q86XS5 388 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 MS4A15Q8N5U1 240 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 OR4D6Q8NGJ1 314 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 ZNF596Q8TC21 504 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 SLAMF9Q96A28 289 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 DACT3Q96B18 629 aaPredicted RBP4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 SMIM19Q96E16 107 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 AKR1E2Q96JD6 320 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 ZNF714Q96N38 554 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 SLC29A1Q99808 456 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 CDCA4Q9BXL8 241 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 SIRPDQ9H106 197 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 SLITRK2Q9H156 845 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 METTL9Q9H1A3 318 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 Q9H521 79 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 HES4Q9HCC6 221 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 AMBNQ9NP70 447 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 FGF20Q9NP95 211 aaPredicted RBP4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 TMEM138Q9NPI0 162 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 OR6C3Q9NZP0 311 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 UBE2J1Q9Y385 318 aaPredicted RBP4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 TPRKBQ9Y3C4 175 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 TBL2Q9Y4P3 447 aaKnown RBP4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 MMP24Q9Y5R2 645 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 LINC00312Q9Y6C7 94 aa4.62□□□□□ -1.67
CLSTN3-215ENST00000544584 IGHV3OR16-10A0A075B7F0 116 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 A6NIN4 97 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 OR4C45A6NMZ5 311 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 PRR32B1ATL7 298 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 TOR1AO14656 332 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 TIMM23O14925 209 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 CASQ2O14958 399 aaPredicted RBP4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 DEGS1O15121 323 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 MAGEB4O15481 346 aaPredicted RBP4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 HOXA3O43365 443 aaPredicted RBP4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 SYNGR1O43759 233 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 PEX14O75381 377 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 KDM4BO94953 1096 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 ZFPL1O95159 310 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 NDUFA7O95182 113 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 CD1AP06126 327 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 LPLP06858 475 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 SFTPBP07988 381 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 ZNF728P0DKX0 622 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 ZNF44P15621 663 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 PRKACAP17612 351 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 PSMA1P25786 263 aaKnown RBP4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 BRS3P32247 399 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 ZNF93P35789 620 aaPredicted RBP4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 KIR3DL2P43630 455 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 IER3P46695 156 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 ERVK11-1P61568 191 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 BDH1Q02338 343 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 COL10A1Q03692 680 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 ST3GAL4Q11206 333 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 RIPK1Q13546 671 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 RBM39Q14498 530 aaKnown RBP4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 IL13RA2Q14627 380 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 CDK5R1Q15078 307 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 DEFB112Q30KQ8 113 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 AWAT1Q58HT5 328 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 OGFRL1Q5TC84 451 aaPredicted RBP4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 MINOS1Q5TGZ0 78 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 CCDC144NLQ6NUI1 221 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 LDLRAD3Q86YD5 345 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 CDH26Q8IXH8 852 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 RDH10Q8IZV5 341 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 PRSS35Q8N3Z0 413 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 NKAIN3Q8N8D7 197 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 ZDHHC22Q8N966 263 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 BEND2Q8NDZ0 799 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 PXT1Q8NFP0 134 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 OR51A2Q8NGJ7 313 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 OR52I1Q8NGK6 324 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 OR13C9Q8NGT0 318 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 RPS4Y2Q8TD47 263 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 UBE2FQ969M7 185 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 PPP1R14AQ96A00 147 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 TMEM106AQ96A25 262 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 MALSU1Q96EH3 234 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 MRPS24Q96EL2 167 aaKnown RBP4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 TBX15Q96SF7 602 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 MND1Q9BWT6 205 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 FAM192AQ9GZU8 254 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 HMG20AQ9NP66 347 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 SIRT7Q9NRC8 400 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 PLCXD1Q9NUJ7 323 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 TAS2R3Q9NYW6 316 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms