RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 IGHV2-26A0A0B4J1V2 119 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 GAGE10A6NGK3 116 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 SMIM23A6NLE4 172 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 EFCAB9A8MZ26 197 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 LEUTXA8MZ59 168 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 TEX22C9J3V5 150 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 H3BSH0 61 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 SDHDO14521 159 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 OVOL1O14753 267 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 HSPA12AO43301 675 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 ITM2AO43736 263 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 MTRF1O75570 445 aaKnown RBP3.16□□□□□ -1.9
SNHG1-220ENST00000544550 SERPINA1P01009 418 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 IGHG2P01859 326 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 HLA-DQA2P01906 255 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 APOC1P02654 83 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 OR8U9P0C7N5 309 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 TROVE2P10155 538 aaKnown RBP eCLIP3.16□□□□□ -1.9
SNHG1-220ENST00000544550 ZNF823P16415 610 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 OTX1P32242 354 aaPredicted RBP3.16□□□□□ -1.9
SNHG1-220ENST00000544550 SLC1A6P48664 564 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 DLX6P56179 175 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 ESRRGP62508 458 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 ACTA2P62736 377 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 ACTG2P63267 376 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 ACTC1P68032 377 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 ACTA1P68133 377 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 RPP30P78346 268 aaKnown RBP3.16□□□□□ -1.9
SNHG1-220ENST00000544550 CBX1P83916 185 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 FAM3AP98173 230 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 BDH1Q02338 343 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 GABPB1Q06547 395 aaPredicted RBP3.16□□□□□ -1.9
SNHG1-220ENST00000544550 ZNF616Q08AN1 781 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 GPR50Q13585 617 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 IL13RA2Q14627 380 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 HAGHQ16775 308 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 MEP1BQ16820 701 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 CYP51A1Q16850 503 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 ZBED5Q49AG3 693 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 FAM76BQ5HYJ3 339 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 LDLRAD2Q5SZI1 272 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 OTPQ5XKR4 325 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 OR52W1Q6IF63 320 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 LINC00336Q6ZUF6 198 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 FAM122BQ7Z309 247 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 RTN4RL2Q86UN3 420 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 IFT20Q8IY31 132 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 RNF113BQ8IZP6 322 aaKnown RBP3.16□□□□□ -1.9
SNHG1-220ENST00000544550 RPP25LQ8N5L8 163 aaKnown RBP3.16□□□□□ -1.9
SNHG1-220ENST00000544550 ZNF676Q8N7Q3 588 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 SETD9Q8NE22 299 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 OR4M1Q8NGD0 313 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 OR4D11Q8NGI4 311 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 OR4P4Q8NGL7 312 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 OSR1Q8TAX0 266 aaPredicted RBP3.16□□□□□ -1.9
SNHG1-220ENST00000544550 RPL3LQ92901 407 aaKnown RBP3.16□□□□□ -1.9
SNHG1-220ENST00000544550 Q96M85 177 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 NOL4LQ96MY1 436 aaPredicted RBP3.16□□□□□ -1.9
SNHG1-220ENST00000544550 C7orf26Q96N11 449 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 ZNF714Q96N38 554 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 GPX7Q96SL4 187 aaPredicted RBP3.16□□□□□ -1.9
SNHG1-220ENST00000544550 COPS4Q9BT78 406 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 CADM1Q9BY67 442 aaKnown RBP3.16□□□□□ -1.9
SNHG1-220ENST00000544550 TMEM133Q9H2Q1 129 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 RGCCQ9H4X1 137 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 TUBA4BQ9H853 241 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 YY1AP1Q9H869 796 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 PNRC2Q9NPJ4 139 aaKnown RBP3.16□□□□□ -1.9
SNHG1-220ENST00000544550 PCDHB16Q9NRJ7 776 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 PPP1R14DQ9NXH3 145 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 SLC25A37Q9NYZ2 338 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 VAPAQ9P0L0 249 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 DNAJB9Q9UBS3 223 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 CYB5R1Q9UHQ9 305 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 PYCARDQ9ULZ3 195 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 KLK5Q9Y337 293 aaPredicted RBP3.16□□□□□ -1.9
SNHG1-220ENST00000544550 SH3GLB1Q9Y371 365 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 ADAM18Q9Y3Q7 739 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 SESN1Q9Y6P5 492 aa3.16□□□□□ -1.9
SNHG1-220ENST00000544550 NUP214P35658 2090 aaPredicted RBP3.16□□□□□ -1.9
SNHG1-220ENST00000544550 STAB2Q8WWQ8 2551 aa3.15□□□□□ -1.9
SNHG1-220ENST00000544550 KIAA1109Q2LD37 5005 aa3.15□□□□□ -1.9
SNHG1-220ENST00000544550 A0A087X0M5 115 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 hCG_38984A0A1B0GV85 526 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 A0A1B0GX30 115 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 hADV38S2A0JD32 116 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 RFPL4AA6NLU0 287 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 RFPL4AL1F8VTS6 287 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 UBDO15205 165 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 BIRC5O15392 142 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 SPAG7O75391 227 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 NDUFB2O95178 105 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 RENP00797 406 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 CST4P01036 141 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 IFNA14P01570 189 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 TFF1P04155 84 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 SHBGP04278 402 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 OR5H8P0DN80 308 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 PIPP12273 146 aaPredicted RBP3.15□□□□□ -1.91
SNHG1-220ENST00000544550 ARSBP15848 533 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms