RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 RALYQ9UKM9 306 aaKnown RBP11.65□□□□□ -0.54
HCFC2-202ENST00000544223 ABCA4P78363 2273 aa11.65□□□□□ -0.54
HCFC2-202ENST00000544223 SPTAN1Q13813 2472 aaKnown RBP11.65□□□□□ -0.54
HCFC2-202ENST00000544223 DISC1C4P0D8 188 aa11.65□□□□□ -0.54
HCFC2-202ENST00000544223 VAMP1P23763 118 aa11.65□□□□□ -0.54
HCFC2-202ENST00000544223 CEACAM8P31997 349 aaPredicted RBP11.65□□□□□ -0.54
HCFC2-202ENST00000544223 TIMP3P35625 211 aa11.65□□□□□ -0.54
HCFC2-202ENST00000544223 SSBP1Q04837 148 aaKnown RBP11.65□□□□□ -0.54
HCFC2-202ENST00000544223 ZNF154Q13106 437 aa11.65□□□□□ -0.54
HCFC2-202ENST00000544223 PPP1R1AQ13522 171 aa11.65□□□□□ -0.54
HCFC2-202ENST00000544223 P2RY6Q15077 328 aa11.65□□□□□ -0.54
HCFC2-202ENST00000544223 CD276Q5ZPR3 534 aa11.65□□□□□ -0.54
HCFC2-202ENST00000544223 HOGA1Q86XE5 327 aa11.65□□□□□ -0.54
HCFC2-202ENST00000544223 TCTE3Q8IZS6 198 aa11.65□□□□□ -0.54
HCFC2-202ENST00000544223 OR5A2Q8NGI9 324 aa11.65□□□□□ -0.54
HCFC2-202ENST00000544223 OR5H14A6NHG9 310 aa11.64□□□□□ -0.55
HCFC2-202ENST00000544223 A8MXE2 369 aa11.64□□□□□ -0.55
HCFC2-202ENST00000544223 TRAPPC2LH3BP13 241 aa11.64□□□□□ -0.55
HCFC2-202ENST00000544223 NOS1APO75052 506 aaPredicted RBP11.64□□□□□ -0.55
HCFC2-202ENST00000544223 SCGNO76038 276 aa11.64□□□□□ -0.55
HCFC2-202ENST00000544223 CNOT4O95628 575 aaKnown RBP11.64□□□□□ -0.55
HCFC2-202ENST00000544223 GLRA1P23415 457 aa11.64□□□□□ -0.55
HCFC2-202ENST00000544223 OR3A3P47888 321 aa11.64□□□□□ -0.55
HCFC2-202ENST00000544223 DHRS2Q13268 280 aa11.64□□□□□ -0.55
HCFC2-202ENST00000544223 CHRFAM7AQ494W8 412 aa11.64□□□□□ -0.55
HCFC2-202ENST00000544223 OR2T35Q8NGX2 323 aa11.64□□□□□ -0.55
HCFC2-202ENST00000544223 SYT3Q9BQG1 590 aa11.64□□□□□ -0.55
HCFC2-202ENST00000544223 ZNF436Q9C0F3 470 aaPredicted RBP11.64□□□□□ -0.55
HCFC2-202ENST00000544223 OR51I2Q9H344 312 aa11.64□□□□□ -0.55
HCFC2-202ENST00000544223 DLL4Q9NR61 685 aa11.64□□□□□ -0.55
HCFC2-202ENST00000544223 CRYBG3Q68DQ2 2970 aa11.64□□□□□ -0.55
HCFC2-202ENST00000544223 CSMD1Q96PZ7 3565 aa11.64□□□□□ -0.55
HCFC2-202ENST00000544223 ATP6V1G2-DDX39BF2Z307 99 aa11.64□□□□□ -0.55
HCFC2-202ENST00000544223 G3V3Q6 166 aa11.64□□□□□ -0.55
HCFC2-202ENST00000544223 TIMM8AO60220 97 aaPredicted RBP11.64□□□□□ -0.55
HCFC2-202ENST00000544223 TSC22D2O75157 780 aa11.64□□□□□ -0.55
HCFC2-202ENST00000544223 HLA-AP01891 365 aaKnown RBP11.64□□□□□ -0.55
HCFC2-202ENST00000544223 FCGR3AP08637 254 aa11.64□□□□□ -0.55
HCFC2-202ENST00000544223 SSTR2P30874 369 aa11.64□□□□□ -0.55
HCFC2-202ENST00000544223 RAG2P55895 527 aa11.64□□□□□ -0.55
HCFC2-202ENST00000544223 PNLIPRP3Q17RR3 467 aa11.64□□□□□ -0.55
HCFC2-202ENST00000544223 AADACL3Q5VUY0 350 aa11.64□□□□□ -0.55
HCFC2-202ENST00000544223 LAMTOR1Q6IAA8 161 aa11.64□□□□□ -0.55
HCFC2-202ENST00000544223 C20orf204Q6ZNR8 217 aa11.64□□□□□ -0.55
HCFC2-202ENST00000544223 DPPA2Q7Z7J5 298 aa11.64□□□□□ -0.55
HCFC2-202ENST00000544223 ZBTB8BQ8NAP8 495 aaPredicted RBP11.64□□□□□ -0.55
HCFC2-202ENST00000544223 RELL2Q8NC24 303 aaPredicted RBP11.64□□□□□ -0.55
HCFC2-202ENST00000544223 NEK7Q8TDX7 302 aa11.64□□□□□ -0.55
HCFC2-202ENST00000544223 TREM2Q9NZC2 230 aa11.64□□□□□ -0.55
HCFC2-202ENST00000544223 SERPINE3A8MV23 424 aa11.63□□□□□ -0.55
HCFC2-202ENST00000544223 ANXA3P12429 323 aa11.63□□□□□ -0.55
HCFC2-202ENST00000544223 GNG3P63215 75 aa11.63□□□□□ -0.55
HCFC2-202ENST00000544223 NAAAQ02083 359 aa11.63□□□□□ -0.55
HCFC2-202ENST00000544223 OR8G1Q15617 311 aa11.63□□□□□ -0.55
HCFC2-202ENST00000544223 IGSF11Q5DX21 431 aa11.63□□□□□ -0.55
HCFC2-202ENST00000544223 ZBTB37Q5TC79 503 aa11.63□□□□□ -0.55
HCFC2-202ENST00000544223 SLC22A25Q6T423 547 aa11.63□□□□□ -0.55
HCFC2-202ENST00000544223 GPHA2Q96T91 129 aa11.63□□□□□ -0.55
HCFC2-202ENST00000544223 NUDT16L1Q9BRJ7 211 aaKnown RBP11.63□□□□□ -0.55
HCFC2-202ENST00000544223 PIPOXQ9P0Z9 390 aa11.63□□□□□ -0.55
HCFC2-202ENST00000544223 MGAT4AQ9UM21 535 aa11.63□□□□□ -0.55
HCFC2-202ENST00000544223 MEIKINA0A087WXM9 373 aa11.63□□□□□ -0.55
HCFC2-202ENST00000544223 ZNF780AO75290 641 aaPredicted RBP11.63□□□□□ -0.55
HCFC2-202ENST00000544223 PDCD6O75340 191 aa11.63□□□□□ -0.55
HCFC2-202ENST00000544223 IGLV1-44P01699 117 aa11.63□□□□□ -0.55
HCFC2-202ENST00000544223 GZMKP49863 264 aa11.63□□□□□ -0.55
HCFC2-202ENST00000544223 MEF2DQ14814 521 aa11.63□□□□□ -0.55
HCFC2-202ENST00000544223 PPA1Q15181 289 aa11.63□□□□□ -0.55
HCFC2-202ENST00000544223 C1orf162Q8NEQ5 155 aaPredicted RBP11.63□□□□□ -0.55
HCFC2-202ENST00000544223 OR5AP2Q8NGF4 316 aa11.63□□□□□ -0.55
HCFC2-202ENST00000544223 CPNE2Q96FN4 548 aaPredicted RBP11.63□□□□□ -0.55
HCFC2-202ENST00000544223 SEC22AQ96IW7 307 aa11.63□□□□□ -0.55
HCFC2-202ENST00000544223 PRRT1Q99946 306 aa11.63□□□□□ -0.55
HCFC2-202ENST00000544223 TMEM246Q9BRR3 403 aa11.63□□□□□ -0.55
HCFC2-202ENST00000544223 C5orf66Q9H5L9 145 aa11.63□□□□□ -0.55
HCFC2-202ENST00000544223 HSPB11Q9Y547 144 aa11.63□□□□□ -0.55
HCFC2-202ENST00000544223 TRGV8A0A0C4DH27 118 aa11.62□□□□□ -0.55
HCFC2-202ENST00000544223 SIRPB1O00241 398 aa11.62□□□□□ -0.55
HCFC2-202ENST00000544223 ATP6V1G1O75348 118 aa11.62□□□□□ -0.55
HCFC2-202ENST00000544223 KNG1P01042 644 aa11.62□□□□□ -0.55
HCFC2-202ENST00000544223 GSTT2P0CG29 244 aa11.62□□□□□ -0.55
HCFC2-202ENST00000544223 FXYD4P59646 89 aa11.62□□□□□ -0.55
HCFC2-202ENST00000544223 ARPC4P59998 168 aa11.62□□□□□ -0.55
HCFC2-202ENST00000544223 SLC9A3R2Q15599 337 aa11.62□□□□□ -0.55
HCFC2-202ENST00000544223 SEZ6L2Q6UXD5 910 aa11.62□□□□□ -0.55
HCFC2-202ENST00000544223 KCTD9Q7L273 389 aa11.62□□□□□ -0.55
HCFC2-202ENST00000544223 TMEM17Q86X19 198 aa11.62□□□□□ -0.55
HCFC2-202ENST00000544223 MKXQ8IYA7 352 aa11.62□□□□□ -0.55
HCFC2-202ENST00000544223 OR5T2Q8NGG2 359 aa11.62□□□□□ -0.55
HCFC2-202ENST00000544223 TERB2Q8NHR7 220 aa11.62□□□□□ -0.55
HCFC2-202ENST00000544223 TOMM40LQ969M1 308 aa11.62□□□□□ -0.55
HCFC2-202ENST00000544223 ZNF2Q9BSG1 426 aaPredicted RBP11.62□□□□□ -0.55
HCFC2-202ENST00000544223 CHMP1AQ9HD42 196 aaPredicted RBP11.62□□□□□ -0.55
HCFC2-202ENST00000544223 OR14J1Q9UGF5 321 aa11.62□□□□□ -0.55
HCFC2-202ENST00000544223 PURGQ9UJV8 347 aaKnown RBP11.62□□□□□ -0.55
HCFC2-202ENST00000544223 MPC1Q9Y5U8 109 aa11.62□□□□□ -0.55
HCFC2-202ENST00000544223 HIVEP3Q5T1R4 2406 aa11.62□□□□□ -0.55
HCFC2-202ENST00000544223 C1QBP02746 253 aa11.62□□□□□ -0.55
HCFC2-202ENST00000544223 RAC2P15153 192 aa11.62□□□□□ -0.55
HCFC2-202ENST00000544223 NAT1P18440 290 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms