RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 OR8H2Q8N162 312 aa10.64□□□□□ -0.71
TNFRSF1A-215ENST00000543359 FAM58AQ8N1B3 248 aa10.64□□□□□ -0.71
TNFRSF1A-215ENST00000543359 DYNAPQ8N1N2 210 aa10.64□□□□□ -0.71
TNFRSF1A-215ENST00000543359 ASCC1Q8N9N2 400 aaKnown RBP10.64□□□□□ -0.71
TNFRSF1A-215ENST00000543359 PPP1R35Q8TAP8 253 aa10.64□□□□□ -0.71
TNFRSF1A-215ENST00000543359 EMG1Q92979 244 aaKnown RBP10.64□□□□□ -0.71
TNFRSF1A-215ENST00000543359 SPSB1Q96BD6 273 aa10.64□□□□□ -0.71
TNFRSF1A-215ENST00000543359 SNX22Q96L94 193 aa10.64□□□□□ -0.71
TNFRSF1A-215ENST00000543359 HEXA-AS1Q9H8Q6 139 aa10.64□□□□□ -0.71
TNFRSF1A-215ENST00000543359 INPP5EQ9NRR6 644 aa10.64□□□□□ -0.71
TNFRSF1A-215ENST00000543359 RNF114Q9Y508 228 aa10.64□□□□□ -0.71
TNFRSF1A-215ENST00000543359 KIAA2026Q5HYC2 2103 aa10.64□□□□□ -0.71
TNFRSF1A-215ENST00000543359 A0A1W2PPH5 198 aa10.63□□□□□ -0.71
TNFRSF1A-215ENST00000543359 MEX3AA1L020 520 aaKnown RBP10.63□□□□□ -0.71
TNFRSF1A-215ENST00000543359 ODF3BA8MYP8 253 aa10.63□□□□□ -0.71
TNFRSF1A-215ENST00000543359 KDM4BO94953 1096 aa10.63□□□□□ -0.71
TNFRSF1A-215ENST00000543359 ALX3O95076 343 aa10.63□□□□□ -0.71
TNFRSF1A-215ENST00000543359 FADS2O95864 444 aaKnown RBP10.63□□□□□ -0.71
TNFRSF1A-215ENST00000543359 HAND1O96004 215 aa10.63□□□□□ -0.71
TNFRSF1A-215ENST00000543359 PAHP00439 452 aa10.63□□□□□ -0.71
TNFRSF1A-215ENST00000543359 RBP4P02753 201 aa10.63□□□□□ -0.71
TNFRSF1A-215ENST00000543359 CALCBP10092 127 aa10.63□□□□□ -0.71
TNFRSF1A-215ENST00000543359 DUSP1P28562 367 aa10.63□□□□□ -0.71
TNFRSF1A-215ENST00000543359 TGFBR2P37173 567 aa10.63□□□□□ -0.71
TNFRSF1A-215ENST00000543359 MEF2CQ06413 473 aaPredicted RBP10.63□□□□□ -0.71
TNFRSF1A-215ENST00000543359 SMN1Q16637 294 aaKnown RBP10.63□□□□□ -0.71
TNFRSF1A-215ENST00000543359 LPCAT4Q643R3 524 aa10.63□□□□□ -0.71
TNFRSF1A-215ENST00000543359 ASPHD2Q6ICH7 369 aa10.63□□□□□ -0.71
TNFRSF1A-215ENST00000543359 TREML4Q6UXN2 200 aa10.63□□□□□ -0.71
TNFRSF1A-215ENST00000543359 ZNF782Q6ZMW2 699 aaPredicted RBP10.63□□□□□ -0.71
TNFRSF1A-215ENST00000543359 LHFPL2Q6ZUX7 228 aa10.63□□□□□ -0.71
TNFRSF1A-215ENST00000543359 LHFPL4Q7Z7J7 247 aa10.63□□□□□ -0.71
TNFRSF1A-215ENST00000543359 Q8IYB0 196 aa10.63□□□□□ -0.71
TNFRSF1A-215ENST00000543359 OPALINQ96PE5 141 aa10.63□□□□□ -0.71
TNFRSF1A-215ENST00000543359 SPACA5Q96QH8 159 aa10.63□□□□□ -0.71
TNFRSF1A-215ENST00000543359 SSX3Q99909 188 aa10.63□□□□□ -0.71
TNFRSF1A-215ENST00000543359 PDCD1LG2Q9BQ51 273 aa10.63□□□□□ -0.71
TNFRSF1A-215ENST00000543359 JAM3Q9BX67 310 aa10.63□□□□□ -0.71
TNFRSF1A-215ENST00000543359 HMG20AQ9NP66 347 aa10.63□□□□□ -0.71
TNFRSF1A-215ENST00000543359 FGF20Q9NP95 211 aaPredicted RBP10.63□□□□□ -0.71
TNFRSF1A-215ENST00000543359 RPL36Q9Y3U8 105 aaKnown RBP10.63□□□□□ -0.71
TNFRSF1A-215ENST00000543359 H3BUX3 64 aa10.62□□□□□ -0.71
TNFRSF1A-215ENST00000543359 ZNF20P17024 532 aa10.62□□□□□ -0.71
TNFRSF1A-215ENST00000543359 COX7A1P24310 79 aa10.62□□□□□ -0.71
TNFRSF1A-215ENST00000543359 OR3A1P47881 315 aa10.62□□□□□ -0.71
TNFRSF1A-215ENST00000543359 POU3F4P49335 361 aa10.62□□□□□ -0.71
TNFRSF1A-215ENST00000543359 ZP1P60852 638 aa10.62□□□□□ -0.71
TNFRSF1A-215ENST00000543359 DHRS7BQ6IAN0 325 aaPredicted RBP10.62□□□□□ -0.71
TNFRSF1A-215ENST00000543359 SLC35E4Q6ICL7 350 aa10.62□□□□□ -0.71
TNFRSF1A-215ENST00000543359 ZNF529Q6P280 563 aa10.62□□□□□ -0.71
TNFRSF1A-215ENST00000543359 PARP16Q8N5Y8 322 aa10.62□□□□□ -0.71
TNFRSF1A-215ENST00000543359 ZNF676Q8N7Q3 588 aa10.62□□□□□ -0.71
TNFRSF1A-215ENST00000543359 OR4S1Q8NGB4 309 aa10.62□□□□□ -0.71
TNFRSF1A-215ENST00000543359 OR11H6Q8NGC7 330 aa10.62□□□□□ -0.71
TNFRSF1A-215ENST00000543359 OR13C3Q8NGS6 347 aa10.62□□□□□ -0.71
TNFRSF1A-215ENST00000543359 OR13C9Q8NGT0 318 aa10.62□□□□□ -0.71
TNFRSF1A-215ENST00000543359 RPS4Y2Q8TD47 263 aa10.62□□□□□ -0.71
TNFRSF1A-215ENST00000543359 RGP1Q92546 391 aaPredicted RBP10.62□□□□□ -0.71
TNFRSF1A-215ENST00000543359 RFT1Q96AA3 541 aa10.62□□□□□ -0.71
TNFRSF1A-215ENST00000543359 RDH12Q96NR8 316 aa10.62□□□□□ -0.71
TNFRSF1A-215ENST00000543359 CHST6Q9GZX3 395 aa10.62□□□□□ -0.71
TNFRSF1A-215ENST00000543359 ZCCHC4Q9H5U6 513 aa10.62□□□□□ -0.71
TNFRSF1A-215ENST00000543359 SMPD3Q9NY59 655 aaPredicted RBP10.62□□□□□ -0.71
TNFRSF1A-215ENST00000543359 hCG_1809904A0A1W2PP81 198 aa10.61□□□□□ -0.71
TNFRSF1A-215ENST00000543359 A0A1W2PPE2 198 aa10.61□□□□□ -0.71
TNFRSF1A-215ENST00000543359 A0A1W2PR64 198 aa10.61□□□□□ -0.71
TNFRSF1A-215ENST00000543359 A0A1W2PRV1 198 aa10.61□□□□□ -0.71
TNFRSF1A-215ENST00000543359 BTBD17A6NE02 478 aa10.61□□□□□ -0.71
TNFRSF1A-215ENST00000543359 TMEM212A6NML5 194 aa10.61□□□□□ -0.71
TNFRSF1A-215ENST00000543359 VGLL3A8MV65 326 aa10.61□□□□□ -0.71
TNFRSF1A-215ENST00000543359 BAG2O95816 211 aa10.61□□□□□ -0.71
TNFRSF1A-215ENST00000543359 IGHV1-8P0DP01 117 aa10.61□□□□□ -0.71
TNFRSF1A-215ENST00000543359 PRKACAP17612 351 aa10.61□□□□□ -0.71
TNFRSF1A-215ENST00000543359 LMO1P25800 156 aa10.61□□□□□ -0.71
TNFRSF1A-215ENST00000543359 ERP29P30040 261 aaKnown RBP10.61□□□□□ -0.71
TNFRSF1A-215ENST00000543359 GTF2A1P52655 376 aaPredicted RBP10.61□□□□□ -0.71
TNFRSF1A-215ENST00000543359 MRPL28Q13084 256 aaKnown RBP10.61□□□□□ -0.71
TNFRSF1A-215ENST00000543359 GRK1Q15835 563 aa10.61□□□□□ -0.71
TNFRSF1A-215ENST00000543359 LRRC75BQ2VPJ9 315 aa10.61□□□□□ -0.71
TNFRSF1A-215ENST00000543359 KLHL22Q53GT1 634 aa10.61□□□□□ -0.71
TNFRSF1A-215ENST00000543359 SPIN3Q5JUX0 258 aa10.61□□□□□ -0.71
TNFRSF1A-215ENST00000543359 ZNF691Q5VV52 312 aa10.61□□□□□ -0.71
TNFRSF1A-215ENST00000543359 ZNF626Q68DY1 528 aa10.61□□□□□ -0.71
TNFRSF1A-215ENST00000543359 XAF1Q6GPH4 301 aa10.61□□□□□ -0.71
TNFRSF1A-215ENST00000543359 Q6P435 159 aa10.61□□□□□ -0.71
TNFRSF1A-215ENST00000543359 GDPD3Q7L5L3 318 aa10.61□□□□□ -0.71
TNFRSF1A-215ENST00000543359 SAXO1Q8IYX7 474 aa10.61□□□□□ -0.71
TNFRSF1A-215ENST00000543359 TPRX1Q8N7U7 411 aa10.61□□□□□ -0.71
TNFRSF1A-215ENST00000543359 MRPL48Q96GC5 212 aaKnown RBP10.61□□□□□ -0.71
TNFRSF1A-215ENST00000543359 COMMD4Q9H0A8 199 aa10.61□□□□□ -0.71
TNFRSF1A-215ENST00000543359 FBLN5Q9UBX5 448 aa10.61□□□□□ -0.71
TNFRSF1A-215ENST00000543359 hADV38S2A0JD32 116 aa10.6□□□□□ -0.71
TNFRSF1A-215ENST00000543359 CHST1O43916 411 aa10.6□□□□□ -0.71
TNFRSF1A-215ENST00000543359 MMP23AO75900 390 aa10.6□□□□□ -0.71
TNFRSF1A-215ENST00000543359 CLIC3O95833 236 aa10.6□□□□□ -0.71
TNFRSF1A-215ENST00000543359 OR2H2O95918 312 aa10.6□□□□□ -0.71
TNFRSF1A-215ENST00000543359 CYB5AP00167 134 aa10.6□□□□□ -0.71
TNFRSF1A-215ENST00000543359 GABRR1P24046 479 aa10.6□□□□□ -0.71
TNFRSF1A-215ENST00000543359 PEX2P28328 305 aa10.6□□□□□ -0.71
TNFRSF1A-215ENST00000543359 ETV1P50549 477 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms