RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 RBM24Q9BX46 236 aaKnown RBP4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 SRXN1Q9BYN0 137 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 ULBP2Q9BZM5 246 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 EGLN1Q9GZT9 426 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 HRH4Q9H3N8 390 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 NAA60Q9H7X0 242 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 PLEKHA2Q9HB19 425 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 TREM1Q9NP99 234 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 OR2S2Q9NQN1 319 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 GPR173Q9NS66 373 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 ZFP57Q9NU63 452 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 ZNF701Q9NV72 531 aaPredicted RBP4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 NECAP2Q9NVZ3 263 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 PLEK2Q9NYT0 353 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 GSKIPQ9P0R6 139 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 FBXL17Q9UF56 701 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 ZNF391Q9UJN7 358 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 PADI1Q9ULC6 663 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 FAM96BQ9Y3D0 163 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 HS3ST3B1Q9Y662 390 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 EML6Q6ZMW3 1958 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 KIAA1549Q9HCM3 1950 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 DMDP11532 3685 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 IGKV1-12A0A0C4DH73 117 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 MEX3AA1L020 520 aaKnown RBP4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 GJE1A6NN92 205 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 ZNF716A6NP11 495 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 C9JQL5 133 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 E5RGE8 158 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 NTN3O00634 580 aaPredicted RBP4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 SGCEO43556 437 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 MED6O75586 246 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 CBR3O75828 277 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 IFNA21P01568 189 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 IGKV1D-12P01611 117 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 MBPP02686 304 aaPredicted RBP4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 GLAP06280 429 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 TMEM225BP0DP42 221 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 FOLR2P14207 255 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 PVALBP20472 110 aaPredicted RBP4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 GABRR1P24046 479 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 HOXA6P31267 233 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 DVL1P1P54792 670 aaPredicted RBP4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 F2RL1P55085 397 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 TRA2AQ13595 282 aaKnown RBP eCLIP4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 DAZAP2Q15038 168 aaPredicted RBP4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 CNN3Q15417 329 aaKnown RBP4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 TAF9Q16594 264 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 RSPO4Q2I0M5 234 aaPredicted RBP4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 HLA-BQ31612 363 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 RNFT1Q5M7Z0 435 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 RAET1LQ5VY80 246 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 LYSMD4Q5XG99 296 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 ABLIM2Q6H8Q1 611 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 GGNQ86UU5 652 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 RPS19BP1Q86WX3 136 aaKnown RBP4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 FAM219AQ8IW50 185 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 SKA3Q8IX90 412 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 COMMD1Q8N668 190 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 AGBL5Q8NDL9 886 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 Q8NFD4 153 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 ADGRG7Q96K78 797 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 SULT4A1Q9BR01 284 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 SUCNR1Q9BXA5 334 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 RGCCQ9H4X1 137 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 TMEM231Q9H6L2 316 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 RNF122Q9H9V4 155 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 TMEM38BQ9NVV0 291 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 ZNF581Q9P0T4 197 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 DKKL1Q9UK85 242 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 PILRBQ9UKJ0 227 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 NSG2Q9Y328 171 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 STARD10Q9Y365 291 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 TIMM10BQ9Y5J6 103 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 FAM186AA6NE01 2351 aa4.5□□□□□ -1.69
ATPAF1-212ENST00000542495 ASCC3Q8N3C0 2202 aaKnown RBP4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 CABIN1Q9Y6J0 2220 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 CACNA1EQ15878 2313 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 CCDC187A0A096LP49 1063 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 hCG_38984A0A1B0GV85 526 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 PQLC2LA1A4F0 135 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 COLCA2A8K830 154 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 MASP2O00187 686 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 AQP7O14520 342 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 TNFSF11O14788 317 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 YKT6O15498 198 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 SPRY1O43609 319 aaPredicted RBP4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 ANGPTL7O43827 346 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 KLK3P07288 261 aaPredicted RBP4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 SFTA3P0C7M3 94 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 SEC11BP0C7V7 166 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 DANCRP0C864 163 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 ZNF728P0DKX0 622 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 ZNF32P17041 273 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 SRD5A2P31213 254 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 P2RY1P47900 373 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 RBP2P50120 134 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 RAB13P51153 203 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 RRADP55042 308 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 PIGPP57054 158 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms