RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 ZNF251Q9BRH9 671 aa13.34□□□□□ -0.27
CNOT9-208ENST00000542068 FBLN5Q9UBX5 448 aa13.34□□□□□ -0.27
CNOT9-208ENST00000542068 SERPINE3A8MV23 424 aa13.33□□□□□ -0.27
CNOT9-208ENST00000542068 K7ESF4 209 aa13.33□□□□□ -0.27
CNOT9-208ENST00000542068 CST7O76096 145 aa13.33□□□□□ -0.27
CNOT9-208ENST00000542068 OR2C1O95371 312 aa13.33□□□□□ -0.27
CNOT9-208ENST00000542068 OR8U8P0C7N1 319 aa13.33□□□□□ -0.27
CNOT9-208ENST00000542068 POLR2GP62487 172 aaKnown RBP eCLIP13.33□□□□□ -0.27
CNOT9-208ENST00000542068 SOHLH1Q5JUK2 328 aa13.33□□□□□ -0.27
CNOT9-208ENST00000542068 SUMF2Q8NBJ7 301 aa13.33□□□□□ -0.27
CNOT9-208ENST00000542068 OR51B6Q9H340 312 aa13.33□□□□□ -0.27
CNOT9-208ENST00000542068 CRYM-AS1A6NIL9 109 aa13.33□□□□□ -0.28
CNOT9-208ENST00000542068 THBS4P35443 961 aa13.33□□□□□ -0.28
CNOT9-208ENST00000542068 AGBL5Q8NDL9 886 aa13.33□□□□□ -0.28
CNOT9-208ENST00000542068 ESPL1Q14674 2120 aa13.33□□□□□ -0.28
CNOT9-208ENST00000542068 CCDC187A0A096LP49 1063 aa13.33□□□□□ -0.28
CNOT9-208ENST00000542068 E5RGE8 158 aa13.33□□□□□ -0.28
CNOT9-208ENST00000542068 H7C1Q1 480 aa13.33□□□□□ -0.28
CNOT9-208ENST00000542068 DHRS3O75911 302 aa13.33□□□□□ -0.28
CNOT9-208ENST00000542068 SLC35A1P78382 337 aa13.33□□□□□ -0.28
CNOT9-208ENST00000542068 S100A12P80511 92 aa13.33□□□□□ -0.28
CNOT9-208ENST00000542068 TLE1Q04724 770 aa13.33□□□□□ -0.28
CNOT9-208ENST00000542068 KIAA0141Q14154 515 aaPredicted RBP13.33□□□□□ -0.28
CNOT9-208ENST00000542068 HNF4GQ14541 408 aa13.33□□□□□ -0.28
CNOT9-208ENST00000542068 CRIP3Q6Q6R5 217 aa13.33□□□□□ -0.28
CNOT9-208ENST00000542068 FBXL14Q8N1E6 418 aa13.33□□□□□ -0.28
CNOT9-208ENST00000542068 NSG2Q9Y328 171 aa13.33□□□□□ -0.28
CNOT9-208ENST00000542068 CEACAM18A8MTB9 384 aa13.32□□□□□ -0.28
CNOT9-208ENST00000542068 CTSDP07339 412 aaPredicted RBP13.32□□□□□ -0.28
CNOT9-208ENST00000542068 MSR1P21757 451 aa13.32□□□□□ -0.28
CNOT9-208ENST00000542068 MSX1P28360 303 aa13.32□□□□□ -0.28
CNOT9-208ENST00000542068 SSR4P51571 173 aa13.32□□□□□ -0.28
CNOT9-208ENST00000542068 GRB2P62993 217 aaKnown RBP13.32□□□□□ -0.28
CNOT9-208ENST00000542068 PPA1Q15181 289 aa13.32□□□□□ -0.28
CNOT9-208ENST00000542068 ZNF674Q2M3X9 581 aa13.32□□□□□ -0.28
CNOT9-208ENST00000542068 C17orf78Q8N4C9 275 aa13.32□□□□□ -0.28
CNOT9-208ENST00000542068 FAM89BQ8N5H3 189 aa13.32□□□□□ -0.28
CNOT9-208ENST00000542068 SAP25Q8TEE9 199 aa13.32□□□□□ -0.28
CNOT9-208ENST00000542068 TCTEX1D2Q8WW35 142 aa13.32□□□□□ -0.28
CNOT9-208ENST00000542068 TGIF2Q9GZN2 237 aa13.32□□□□□ -0.28
CNOT9-208ENST00000542068 ANAPC10Q9UM13 185 aa13.32□□□□□ -0.28
CNOT9-208ENST00000542068 C10orf142B7Z368 130 aa13.32□□□□□ -0.28
CNOT9-208ENST00000542068 NDUFS6O75380 124 aaKnown RBP13.32□□□□□ -0.28
CNOT9-208ENST00000542068 SMIM6P0DI80 62 aa13.32□□□□□ -0.28
CNOT9-208ENST00000542068 PTGDSP41222 190 aa13.32□□□□□ -0.28
CNOT9-208ENST00000542068 STARD6P59095 220 aa13.32□□□□□ -0.28
CNOT9-208ENST00000542068 CDPF1Q6NVV7 123 aa13.32□□□□□ -0.28
CNOT9-208ENST00000542068 OR2G3Q8NGZ4 309 aa13.32□□□□□ -0.28
CNOT9-208ENST00000542068 OR6X1Q8NH79 312 aa13.32□□□□□ -0.28
CNOT9-208ENST00000542068 NAA60Q9H7X0 242 aa13.32□□□□□ -0.28
CNOT9-208ENST00000542068 SLC2A9Q9NRM0 540 aa13.32□□□□□ -0.28
CNOT9-208ENST00000542068 CXCL13O43927 109 aa13.31□□□□□ -0.28
CNOT9-208ENST00000542068 S100A8P05109 93 aa13.31□□□□□ -0.28
CNOT9-208ENST00000542068 TCN2P20062 427 aa13.31□□□□□ -0.28
CNOT9-208ENST00000542068 SUMO3P55854 103 aaPredicted RBP13.31□□□□□ -0.28
CNOT9-208ENST00000542068 FAM3AP98173 230 aa13.31□□□□□ -0.28
CNOT9-208ENST00000542068 ZNF442Q9H7R0 627 aa13.31□□□□□ -0.28
CNOT9-208ENST00000542068 CRLF2Q9HC73 371 aa13.31□□□□□ -0.28
CNOT9-208ENST00000542068 ZDHHC8Q9ULC8 765 aa13.31□□□□□ -0.28
CNOT9-208ENST00000542068 STARD10Q9Y365 291 aa13.31□□□□□ -0.28
CNOT9-208ENST00000542068 UBE2CO00762 179 aa13.31□□□□□ -0.28
CNOT9-208ENST00000542068 OR7C1O76099 320 aaPredicted RBP13.31□□□□□ -0.28
CNOT9-208ENST00000542068 DANCRP0C864 163 aa13.31□□□□□ -0.28
CNOT9-208ENST00000542068 RUNX1Q01196 453 aa13.31□□□□□ -0.28
CNOT9-208ENST00000542068 WIPI1Q5MNZ9 446 aaPredicted RBP13.31□□□□□ -0.28
CNOT9-208ENST00000542068 GJC3Q8NFK1 279 aa13.31□□□□□ -0.28
CNOT9-208ENST00000542068 HAS2Q92819 552 aa13.31□□□□□ -0.28
CNOT9-208ENST00000542068 NAT6Q93015 286 aa13.31□□□□□ -0.28
CNOT9-208ENST00000542068 P4HTMQ9NXG6 502 aa13.31□□□□□ -0.28
CNOT9-208ENST00000542068 SLC7A11Q9UPY5 501 aa13.31□□□□□ -0.28
CNOT9-208ENST00000542068 ADAMTS9Q9P2N4 1935 aa13.31□□□□□ -0.28
CNOT9-208ENST00000542068 H0YL77 283 aa13.31□□□□□ -0.28
CNOT9-208ENST00000542068 H3BP45 60 aa13.31□□□□□ -0.28
CNOT9-208ENST00000542068 SSSCA1O60232 199 aa13.31□□□□□ -0.28
CNOT9-208ENST00000542068 PRF1P14222 555 aa13.31□□□□□ -0.28
CNOT9-208ENST00000542068 FAM189A2Q15884 450 aa13.31□□□□□ -0.28
CNOT9-208ENST00000542068 ZNF774Q6NX45 483 aa13.31□□□□□ -0.28
CNOT9-208ENST00000542068 UBAC2Q8NBM4 344 aa13.31□□□□□ -0.28
CNOT9-208ENST00000542068 NUDT16L1Q9BRJ7 211 aaKnown RBP13.31□□□□□ -0.28
CNOT9-208ENST00000542068 METTL9Q9H1A3 318 aa13.31□□□□□ -0.28
CNOT9-208ENST00000542068 SLC35B3Q9H1N7 401 aa13.31□□□□□ -0.28
CNOT9-208ENST00000542068 PCED1AQ9H1Q7 454 aa13.31□□□□□ -0.28
CNOT9-208ENST00000542068 NELFAQ9H3P2 528 aa13.31□□□□□ -0.28
CNOT9-208ENST00000542068 NECAP2Q9NVZ3 263 aa13.31□□□□□ -0.28
CNOT9-208ENST00000542068 CHCHD2Q9Y6H1 151 aaPredicted RBP13.31□□□□□ -0.28
CNOT9-208ENST00000542068 A0A0G2JMM0 328 aa13.3□□□□□ -0.28
CNOT9-208ENST00000542068 A0A1W2PPB8 328 aa13.3□□□□□ -0.28
CNOT9-208ENST00000542068 A0A1W2PRS3 328 aa13.3□□□□□ -0.28
CNOT9-208ENST00000542068 NKX2-6A6NCS4 301 aa13.3□□□□□ -0.28
CNOT9-208ENST00000542068 KIR3DP1A8MWS1 328 aa13.3□□□□□ -0.28
CNOT9-208ENST00000542068 C3orf80F5H4A9 247 aa13.3□□□□□ -0.28
CNOT9-208ENST00000542068 ST8SIA3O43173 380 aa13.3□□□□□ -0.28
CNOT9-208ENST00000542068 LAMTOR5O43504 91 aa13.3□□□□□ -0.28
CNOT9-208ENST00000542068 ROS1P08922 2347 aa13.3□□□□□ -0.28
CNOT9-208ENST00000542068 AGAP20933 346 aa13.3□□□□□ -0.28
CNOT9-208ENST00000542068 HERV-K104P61576 105 aa13.3□□□□□ -0.28
CNOT9-208ENST00000542068 GNMTQ14749 295 aa13.3□□□□□ -0.28
CNOT9-208ENST00000542068 BORCS8Q96FH0 119 aa13.3□□□□□ -0.28
CNOT9-208ENST00000542068 RNF122Q9H9V4 155 aa13.3□□□□□ -0.28
CNOT9-208ENST00000542068 PLEKHA2Q9HB19 425 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms