RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 GSK3AP49840 483 aa14.1□□□□□ -0.15
VARS2-212ENST00000542001 FUT6P51993 359 aa14.1□□□□□ -0.15
VARS2-212ENST00000542001 TGIF1Q15583 401 aa14.1□□□□□ -0.15
VARS2-212ENST00000542001 OR10V1Q8NGI7 309 aa14.1□□□□□ -0.15
VARS2-212ENST00000542001 FBXO17Q96EF6 278 aa14.1□□□□□ -0.15
VARS2-212ENST00000542001 GDF15Q99988 308 aa14.1□□□□□ -0.15
VARS2-212ENST00000542001 SPG11Q96JI7 2443 aa14.1□□□□□ -0.15
VARS2-212ENST00000542001 SERPINA7P05543 415 aa14.1□□□□□ -0.15
VARS2-212ENST00000542001 PGA4P0DJD7 388 aa14.1□□□□□ -0.15
VARS2-212ENST00000542001 PGA3P0DJD8 388 aa14.1□□□□□ -0.15
VARS2-212ENST00000542001 PNLIPRP3Q17RR3 467 aa14.1□□□□□ -0.15
VARS2-212ENST00000542001 OR10C1Q96KK4 312 aa14.1□□□□□ -0.15
VARS2-212ENST00000542001 CUL9Q8IWT3 2517 aa14.1□□□□□ -0.15
VARS2-212ENST00000542001 A0A087WZY1 265 aa14.1□□□□□ -0.15
VARS2-212ENST00000542001 GPR137BO60478 399 aa14.1□□□□□ -0.15
VARS2-212ENST00000542001 LIFP15018 202 aa14.1□□□□□ -0.15
VARS2-212ENST00000542001 AADACP22760 399 aa14.1□□□□□ -0.15
VARS2-212ENST00000542001 ZNF266Q14584 549 aa14.1□□□□□ -0.15
VARS2-212ENST00000542001 OR8G1Q15617 311 aa14.1□□□□□ -0.15
VARS2-212ENST00000542001 UBE2V2Q15819 145 aa14.1□□□□□ -0.15
VARS2-212ENST00000542001 HIKESHIQ53FT3 197 aa14.1□□□□□ -0.15
VARS2-212ENST00000542001 OR13G1Q8NGZ3 307 aa14.1□□□□□ -0.15
VARS2-212ENST00000542001 FAM206AQ9NX38 181 aa14.1□□□□□ -0.15
VARS2-212ENST00000542001 HNF1AP20823 631 aa14.09□□□□□ -0.15
VARS2-212ENST00000542001 IGSF11Q5DX21 431 aa14.09□□□□□ -0.15
VARS2-212ENST00000542001 CLRN3Q8NCR9 226 aa14.09□□□□□ -0.15
VARS2-212ENST00000542001 FER1L6-AS2Q96M78 137 aa14.09□□□□□ -0.15
VARS2-212ENST00000542001 SSX3Q99909 188 aa14.09□□□□□ -0.15
VARS2-212ENST00000542001 NPDC1Q9NQX5 325 aaPredicted RBP14.09□□□□□ -0.15
VARS2-212ENST00000542001 TP53TG5Q9Y2B4 290 aa14.09□□□□□ -0.15
VARS2-212ENST00000542001 KIR2DS1A0A191URI9 304 aa14.09□□□□□ -0.15
VARS2-212ENST00000542001 IGHEP01854 428 aa14.09□□□□□ -0.15
VARS2-212ENST00000542001 KIR2DS4P43632 304 aa14.09□□□□□ -0.15
VARS2-212ENST00000542001 KIR2DS1Q14954 304 aa14.09□□□□□ -0.15
VARS2-212ENST00000542001 MPPED2Q15777 294 aa14.09□□□□□ -0.15
VARS2-212ENST00000542001 IZUMO4Q1ZYL8 232 aa14.09□□□□□ -0.15
VARS2-212ENST00000542001 FAM24BQ8N5W8 94 aa14.09□□□□□ -0.15
VARS2-212ENST00000542001 OR1J1Q8NGS3 322 aa14.09□□□□□ -0.15
VARS2-212ENST00000542001 SPSB1Q96BD6 273 aa14.09□□□□□ -0.15
VARS2-212ENST00000542001 RPUSD4Q96CM3 377 aaKnown RBP14.09□□□□□ -0.15
VARS2-212ENST00000542001 COLQQ9Y215 455 aaPredicted RBP14.09□□□□□ -0.15
VARS2-212ENST00000542001 A0A1W2PPV4 95 aa14.09□□□□□ -0.15
VARS2-212ENST00000542001 H7C1Q1 480 aa14.09□□□□□ -0.15
VARS2-212ENST00000542001 SCAND1P57086 179 aa14.09□□□□□ -0.15
VARS2-212ENST00000542001 NKX6-1P78426 367 aaPredicted RBP14.09□□□□□ -0.15
VARS2-212ENST00000542001 ZNF92Q03936 586 aa14.09□□□□□ -0.15
VARS2-212ENST00000542001 COL13A1Q5TAT6 717 aaPredicted RBP14.09□□□□□ -0.15
VARS2-212ENST00000542001 PRSS54Q6PEW0 395 aa14.09□□□□□ -0.15
VARS2-212ENST00000542001 OR5C1Q8NGR4 320 aa14.09□□□□□ -0.15
VARS2-212ENST00000542001 RSRP1Q9BUV0 290 aa14.09□□□□□ -0.15
VARS2-212ENST00000542001 UNKLQ9H9P5 680 aaKnown RBP14.09□□□□□ -0.15
VARS2-212ENST00000542001 ZNF319Q9P2F9 582 aa14.09□□□□□ -0.15
VARS2-212ENST00000542001 LHX6Q9UPM6 363 aa14.09□□□□□ -0.15
VARS2-212ENST00000542001 ZNF705GA8MUZ8 300 aaPredicted RBP14.08□□□□□ -0.16
VARS2-212ENST00000542001 OR10AD1Q8NGE0 317 aa14.08□□□□□ -0.16
VARS2-212ENST00000542001 PFDN5Q99471 154 aa14.08□□□□□ -0.16
VARS2-212ENST00000542001 NIPSNAP3BQ9BS92 247 aa14.08□□□□□ -0.16
VARS2-212ENST00000542001 RAB18Q9NP72 206 aa14.08□□□□□ -0.16
VARS2-212ENST00000542001 HEYLQ9NQ87 328 aaPredicted RBP14.08□□□□□ -0.16
VARS2-212ENST00000542001 TREM2Q9NZC2 230 aa14.08□□□□□ -0.16
VARS2-212ENST00000542001 IGKV3D-11A0A0A0MRZ8 115 aa14.08□□□□□ -0.16
VARS2-212ENST00000542001 DHRS7CA6NNS2 312 aa14.08□□□□□ -0.16
VARS2-212ENST00000542001 TTLL8A6PVC2 850 aa14.08□□□□□ -0.16
VARS2-212ENST00000542001 PDCD6O75340 191 aa14.08□□□□□ -0.16
VARS2-212ENST00000542001 IFNA1P01562 189 aa14.08□□□□□ -0.16
VARS2-212ENST00000542001 GP1BAP07359 652 aa14.08□□□□□ -0.16
VARS2-212ENST00000542001 RFPL3SP0C7P2 107 aa14.08□□□□□ -0.16
VARS2-212ENST00000542001 S100PP25815 95 aa14.08□□□□□ -0.16
VARS2-212ENST00000542001 CALCRP30988 508 aa14.08□□□□□ -0.16
VARS2-212ENST00000542001 PTGER4P35408 488 aa14.08□□□□□ -0.16
VARS2-212ENST00000542001 NHLH2Q02577 135 aa14.08□□□□□ -0.16
VARS2-212ENST00000542001 PJVKQ0ZLH3 352 aa14.08□□□□□ -0.16
VARS2-212ENST00000542001 TBC1D28Q2M2D7 210 aa14.08□□□□□ -0.16
VARS2-212ENST00000542001 ANKRD55Q3KP44 614 aa14.08□□□□□ -0.16
VARS2-212ENST00000542001 C1orf210Q8IVY1 113 aa14.08□□□□□ -0.16
VARS2-212ENST00000542001 HEATR1Q9H583 2144 aaKnown RBP14.08□□□□□ -0.16
VARS2-212ENST00000542001 TNFSF18Q9UNG2 199 aa14.08□□□□□ -0.16
VARS2-212ENST00000542001 SHISA7A6NL88 538 aa14.08□□□□□ -0.16
VARS2-212ENST00000542001 METTL15P1P0C7V9 234 aa14.08□□□□□ -0.16
VARS2-212ENST00000542001 F2RL1P55085 397 aa14.08□□□□□ -0.16
VARS2-212ENST00000542001 SPEM2Q0P670 501 aa14.08□□□□□ -0.16
VARS2-212ENST00000542001 PIEZO2Q9H5I5 2752 aa14.08□□□□□ -0.16
VARS2-212ENST00000542001 SLC22A20A6NK97 555 aa14.07□□□□□ -0.16
VARS2-212ENST00000542001 GUK1Q16774 197 aa14.07□□□□□ -0.16
VARS2-212ENST00000542001 ATRAIDQ6UW56 229 aa14.07□□□□□ -0.16
VARS2-212ENST00000542001 SLC2A9Q9NRM0 540 aa14.07□□□□□ -0.16
VARS2-212ENST00000542001 GHRLQ9UBU3 117 aa14.07□□□□□ -0.16
VARS2-212ENST00000542001 TMEM218A2RU14 115 aa14.07□□□□□ -0.16
VARS2-212ENST00000542001 MSGN1A6NI15 193 aa14.07□□□□□ -0.16
VARS2-212ENST00000542001 ZBTB25P24278 435 aa14.07□□□□□ -0.16
VARS2-212ENST00000542001 KIAA0141Q14154 515 aaPredicted RBP14.07□□□□□ -0.16
VARS2-212ENST00000542001 ATP1A1-AS1Q5TC04 95 aa14.07□□□□□ -0.16
VARS2-212ENST00000542001 WDSUB1Q8N9V3 476 aa14.07□□□□□ -0.16
VARS2-212ENST00000542001 PCED1AQ9H1Q7 454 aa14.07□□□□□ -0.16
VARS2-212ENST00000542001 UCK1Q9HA47 277 aa14.07□□□□□ -0.16
VARS2-212ENST00000542001 CCL28Q9NRJ3 127 aa14.07□□□□□ -0.16
VARS2-212ENST00000542001 SLC7A10Q9NS82 523 aa14.07□□□□□ -0.16
VARS2-212ENST00000542001 OR2C1O95371 312 aa14.07□□□□□ -0.16
VARS2-212ENST00000542001 GLAP06280 429 aa14.07□□□□□ -0.16
VARS2-212ENST00000542001 NQO2P16083 231 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms