RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 ZNF596Q8TC21 504 aa21.35■■□□□ 1.01
CHFR-218ENST00000540963 TMEM82A0PJX8 343 aa21.34■■□□□ 1.01
CHFR-218ENST00000540963 PEX2P28328 305 aa21.34■■□□□ 1.01
CHFR-218ENST00000540963 SLC6A1P30531 599 aa21.34■■□□□ 1.01
CHFR-218ENST00000540963 ACTR3P61158 418 aa21.34■■□□□ 1.01
CHFR-218ENST00000540963 BDH1Q02338 343 aa21.34■■□□□ 1.01
CHFR-218ENST00000540963 EDDM3AQ14507 147 aa21.34■■□□□ 1.01
CHFR-218ENST00000540963 SLX4IPQ5VYV7 408 aa21.34■■□□□ 1.01
CHFR-218ENST00000540963 FAHD1Q6P587 224 aa21.34■■□□□ 1.01
CHFR-218ENST00000540963 ENTHD1Q8IYW4 607 aa21.34■■□□□ 1.01
CHFR-218ENST00000540963 MTCH1Q9NZJ7 389 aa21.34■■□□□ 1.01
CHFR-218ENST00000540963 IKZF2Q9UKS7 526 aa21.34■■□□□ 1.01
CHFR-218ENST00000540963 SLC7A11Q9UPY5 501 aa21.34■■□□□ 1.01
CHFR-218ENST00000540963 UBE2J1Q9Y385 318 aaPredicted RBP21.34■■□□□ 1.01
CHFR-218ENST00000540963 A0A1B0GTI1 187 aa21.33■■□□□ 1.01
CHFR-218ENST00000540963 BCL2L15Q5TBC7 163 aa21.33■■□□□ 1.01
CHFR-218ENST00000540963 CREB3L1Q96BA8 519 aa21.33■■□□□ 1.01
CHFR-218ENST00000540963 ZNF556Q9HAH1 456 aa21.33■■□□□ 1.01
CHFR-218ENST00000540963 COPS3Q9UNS2 423 aa21.33■■□□□ 1.01
CHFR-218ENST00000540963 R4GMQ9 66 aa21.33■■□□□ 1.01
CHFR-218ENST00000540963 AMY1AP04745 511 aa21.32■■□□□ 1
CHFR-218ENST00000540963 AMY2AP04746 511 aa21.32■■□□□ 1
CHFR-218ENST00000540963 EPHA2P29317 976 aa21.32■■□□□ 1
CHFR-218ENST00000540963 ERP29P30040 261 aaKnown RBP21.32■■□□□ 1
CHFR-218ENST00000540963 CRISP1P54107 249 aa21.32■■□□□ 1
CHFR-218ENST00000540963 EFNB1P98172 346 aa21.32■■□□□ 1
CHFR-218ENST00000540963 ETV3LQ6ZN32 361 aa21.32■■□□□ 1
CHFR-218ENST00000540963 BCDIN3DQ7Z5W3 292 aaKnown RBP21.32■■□□□ 1
CHFR-218ENST00000540963 Q8IYB0 196 aa21.32■■□□□ 1
CHFR-218ENST00000540963 MNTQ99583 582 aa21.32■■□□□ 1
CHFR-218ENST00000540963 TVP23BQ9NYZ1 205 aa21.32■■□□□ 1
CHFR-218ENST00000540963 OR52A1Q9UKL2 312 aa21.32■■□□□ 1
CHFR-218ENST00000540963 HHLA2Q9UM44 414 aa21.32■■□□□ 1
CHFR-218ENST00000540963 LEUTXA8MZ59 168 aa21.31■■□□□ 1
CHFR-218ENST00000540963 F8VVB4 439 aa21.31■■□□□ 1
CHFR-218ENST00000540963 F8VWA3 439 aa21.31■■□□□ 1
CHFR-218ENST00000540963 MITFO75030 526 aaPredicted RBP21.31■■□□□ 1
CHFR-218ENST00000540963 MRPL3P09001 348 aaKnown RBP21.31■■□□□ 1
CHFR-218ENST00000540963 HOXB6P17509 224 aaKnown RBP21.31■■□□□ 1
CHFR-218ENST00000540963 CCL1P22362 96 aa21.31■■□□□ 1
CHFR-218ENST00000540963 THBS3P49746 956 aa21.31■■□□□ 1
CHFR-218ENST00000540963 BNIP1Q12981 228 aa21.31■■□□□ 1
CHFR-218ENST00000540963 GRK1Q15835 563 aa21.31■■□□□ 1
CHFR-218ENST00000540963 C10orf99Q6UWK7 81 aa21.31■■□□□ 1
CHFR-218ENST00000540963 ABHD12Q8N2K0 398 aa21.31■■□□□ 1
CHFR-218ENST00000540963 PAPOLBQ9NRJ5 636 aaKnown RBP21.31■■□□□ 1
CHFR-218ENST00000540963 GTF2A1LQ9UNN4 478 aa21.31■■□□□ 1
CHFR-218ENST00000540963 PCDHGB5Q9Y5G0 923 aa21.31■■□□□ 1
CHFR-218ENST00000540963 SNX5Q9Y5X3 404 aa21.31■■□□□ 1
CHFR-218ENST00000540963 FAM230AA0A1W2PPH8 454 aa21.3■■□□□ 1
CHFR-218ENST00000540963 M0R129 80 aa21.3■■□□□ 1
CHFR-218ENST00000540963 MGST3O14880 152 aa21.3■■□□□ 1
CHFR-218ENST00000540963 PRKYO43930 277 aa21.3■■□□□ 1
CHFR-218ENST00000540963 HAND1O96004 215 aa21.3■■□□□ 1
CHFR-218ENST00000540963 IGLV1-47P01700 117 aa21.3■■□□□ 1
CHFR-218ENST00000540963 CD24P25063 80 aa21.3■■□□□ 1
CHFR-218ENST00000540963 CEACAM3P40198 252 aa21.3■■□□□ 1
CHFR-218ENST00000540963 FUT6P51993 359 aa21.3■■□□□ 1
CHFR-218ENST00000540963 UNQ9370/PRO34162Q6UXP9 181 aa21.3■■□□□ 1
CHFR-218ENST00000540963 RNF144BQ7Z419 303 aa21.3■■□□□ 1
CHFR-218ENST00000540963 EGFL6Q8IUX8 553 aa21.3■■□□□ 1
CHFR-218ENST00000540963 OR52N4Q8NGI2 321 aa21.3■■□□□ 1
CHFR-218ENST00000540963 TRMT10AQ8TBZ6 339 aaKnown RBP21.3■■□□□ 1
CHFR-218ENST00000540963 NRBF2Q96F24 287 aa21.3■■□□□ 1
CHFR-218ENST00000540963 CNN2Q99439 309 aaKnown RBP21.3■■□□□ 1
CHFR-218ENST00000540963 GAL3ST2Q9H3Q3 398 aa21.3■■□□□ 1
CHFR-218ENST00000540963 PSMB11A5LHX3 300 aa21.29■■□□□ 1
CHFR-218ENST00000540963 CD34P28906 385 aa21.29■■□□□ 1
CHFR-218ENST00000540963 PTGES3Q15185 160 aaKnown RBP21.29■■□□□ 1
CHFR-218ENST00000540963 SNAPC1Q16533 368 aa21.29■■□□□ 1
CHFR-218ENST00000540963 ZNF322Q6U7Q0 402 aaPredicted RBP21.29■■□□□ 1
CHFR-218ENST00000540963 HEPN1Q6WQI6 88 aa21.29■■□□□ 1
CHFR-218ENST00000540963 TPRX1Q8N7U7 411 aa21.29■■□□□ 1
CHFR-218ENST00000540963 GLS2Q9UI32 602 aa21.29■■□□□ 1
CHFR-218ENST00000540963 U3KQK5 164 aa21.29■■□□□ 1
CHFR-218ENST00000540963 KIAA2026Q5HYC2 2103 aa21.28■■□□□ 1
CHFR-218ENST00000540963 A6NIN4 97 aa21.28■■□□□ 1
CHFR-218ENST00000540963 MMP23AO75900 390 aa21.28■■□□□ 1
CHFR-218ENST00000540963 IGHA1P01876 353 aa21.28■■□□□ 1
CHFR-218ENST00000540963 GABRR1P24046 479 aa21.28■■□□□ 1
CHFR-218ENST00000540963 P2RX3P56373 397 aa21.28■■□□□ 1
CHFR-218ENST00000540963 ZNF91Q05481 1191 aa21.28■■□□□ 1
CHFR-218ENST00000540963 CCDC144NLQ6NUI1 221 aa21.28■■□□□ 1
CHFR-218ENST00000540963 TRAPPC6BQ86SZ2 158 aa21.28■■□□□ 1
CHFR-218ENST00000540963 EMG1Q92979 244 aaKnown RBP21.28■■□□□ 1
CHFR-218ENST00000540963 SLAMF9Q96A28 289 aa21.28■■□□□ 1
CHFR-218ENST00000540963 ZNF649Q9BS31 505 aa21.28■■□□□ 1
CHFR-218ENST00000540963 TTTY10Q9BZA0 68 aa21.28■■□□□ 1
CHFR-218ENST00000540963 PLEKHA1Q9HB21 404 aa21.28■■□□□ 1
CHFR-218ENST00000540963 ZFP57Q9NU63 452 aa21.28■■□□□ 1
CHFR-218ENST00000540963 OOSP1A8MZH6 123 aa21.27■■□□□ 1
CHFR-218ENST00000540963 PSPNO60542 156 aa21.27■■□□□ 1
CHFR-218ENST00000540963 GATBO75879 557 aaKnown RBP21.27■■□□□ 1
CHFR-218ENST00000540963 MYCNOSP40205 109 aa21.27■■□□□ 1
CHFR-218ENST00000540963 CDC42P60953 191 aa21.27■■□□□ 1
CHFR-218ENST00000540963 CXCR4P61073 352 aa21.27■■□□□ 1
CHFR-218ENST00000540963 RPL23AP62750 156 aaKnown RBP21.27■■□□□ 1
CHFR-218ENST00000540963 DGCR2P98153 550 aa21.27■■□□□ 1
CHFR-218ENST00000540963 ZNF146Q15072 292 aa21.27■■□□□ 1
CHFR-218ENST00000540963 UBE2V2Q15819 145 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms