RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 ZNF319Q9P2F9 582 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 HSF4Q9ULV5 492 aa7.15□□□□□ -1.26
CHD4-208ENST00000540960 PIGBOS1A0A0B4J2F0 54 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 C7orf66A4D0T2 115 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 A6NIN4 97 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 VSTM5A8MXK1 200 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 RAB27BO00194 218 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 MSTNO14793 375 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 NDUFB6O95139 128 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 RAB3DO95716 219 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 MPIG6BO95866 241 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 PLAUP00749 431 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 IGHV4-39P01824 125 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 GLAP06280 429 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 FAM157BP0CG42 384 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 IGHV4-31P0DP07 118 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 RAC2P15153 192 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 HIST1H1DP16402 221 aaKnown RBP7.14□□□□□ -1.27
CHD4-208ENST00000540960 MGMTP16455 207 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 C4BPBP20851 252 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 CCNOP22674 350 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 IL32P24001 234 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 GIFP27352 417 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 KIR2DL2P43627 348 aaPredicted RBP7.14□□□□□ -1.27
CHD4-208ENST00000540960 ZNF92Q03936 586 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 ARFRP1Q13795 201 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 GK2Q14410 553 aaPredicted RBP7.14□□□□□ -1.27
CHD4-208ENST00000540960 UBE2V2Q15819 145 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 GABRA6Q16445 453 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 SLC22A6Q4U2R8 563 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 RNASE10Q5GAN6 216 aaKnown RBP7.14□□□□□ -1.27
CHD4-208ENST00000540960 CD276Q5ZPR3 534 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 FIP1L1Q6UN15 594 aaKnown RBP7.14□□□□□ -1.27
CHD4-208ENST00000540960 FBXW12Q6X9E4 464 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 C22orf34Q6ZV56 151 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 MOB3CQ70IA8 216 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 Q8IYB0 196 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 CPEB3Q8NE35 698 aaKnown RBP7.14□□□□□ -1.27
CHD4-208ENST00000540960 UBASH3BQ8TF42 649 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 HPS1Q92902 700 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 GCDHQ92947 438 aaPredicted RBP7.14□□□□□ -1.27
CHD4-208ENST00000540960 SNAPC3Q92966 411 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 MUCL1Q96DR8 90 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 SEH1LQ96EE3 360 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 NEDD4LQ96PU5 975 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 PAPOLGQ9BWT3 736 aaKnown RBP7.14□□□□□ -1.27
CHD4-208ENST00000540960 ALX4Q9H161 411 aaPredicted RBP7.14□□□□□ -1.27
CHD4-208ENST00000540960 MMP28Q9H239 520 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 RIMS4Q9H426 269 aaPredicted RBP7.14□□□□□ -1.27
CHD4-208ENST00000540960 MYOZ1Q9NP98 299 aaPredicted RBP7.14□□□□□ -1.27
CHD4-208ENST00000540960 NUDT15Q9NV35 164 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 ELOVL5Q9NYP7 299 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 PRSS50Q9UI38 385 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 POLDIP2Q9Y2S7 368 aa7.14□□□□□ -1.27
CHD4-208ENST00000540960 PRR14LQ5THK1 2151 aa7.13□□□□□ -1.27
CHD4-208ENST00000540960 PCNX3Q9H6A9 2034 aa7.13□□□□□ -1.27
CHD4-208ENST00000540960 LOC100509620A0A075B734 347 aa7.13□□□□□ -1.27
CHD4-208ENST00000540960 IGKV1-9A0A0C4DH69 117 aa7.13□□□□□ -1.27
CHD4-208ENST00000540960 FAM230AA0A1W2PPH8 454 aa7.13□□□□□ -1.27
CHD4-208ENST00000540960 OR5H1A6NKK0 313 aa7.13□□□□□ -1.27
CHD4-208ENST00000540960 TMEM210A6NLX4 147 aa7.13□□□□□ -1.27
CHD4-208ENST00000540960 CD300LBA8K4G0 201 aa7.13□□□□□ -1.27
CHD4-208ENST00000540960 CD74P04233 296 aa7.13□□□□□ -1.27
CHD4-208ENST00000540960 SPNP16150 400 aa7.13□□□□□ -1.27
CHD4-208ENST00000540960 IGHV1-2P23083 117 aa7.13□□□□□ -1.27
CHD4-208ENST00000540960 CDKN1AP38936 164 aa7.13□□□□□ -1.27
CHD4-208ENST00000540960 VEGFCP49767 419 aa7.13□□□□□ -1.27
CHD4-208ENST00000540960 EIF2B2P49770 351 aaKnown RBP7.13□□□□□ -1.27
CHD4-208ENST00000540960 MECP2P51608 486 aaKnown RBP7.13□□□□□ -1.27
CHD4-208ENST00000540960 TAS2R31P59538 309 aa7.13□□□□□ -1.27
CHD4-208ENST00000540960 SELENOVP59797 346 aa7.13□□□□□ -1.27
CHD4-208ENST00000540960 UBE2MP61081 183 aaKnown RBP7.13□□□□□ -1.27
CHD4-208ENST00000540960 RRAS2P62070 204 aaPredicted RBP7.13□□□□□ -1.27
CHD4-208ENST00000540960 RPS23P62266 143 aaKnown RBP7.13□□□□□ -1.27
CHD4-208ENST00000540960 GNG3P63215 75 aa7.13□□□□□ -1.27
CHD4-208ENST00000540960 PDZK1IP1Q13113 114 aa7.13□□□□□ -1.27
CHD4-208ENST00000540960 MAB21L1Q13394 359 aa7.13□□□□□ -1.27
CHD4-208ENST00000540960 ZNF260Q3ZCT1 412 aa7.13□□□□□ -1.27
CHD4-208ENST00000540960 ZFP69Q49AA0 526 aa7.13□□□□□ -1.27
CHD4-208ENST00000540960 TIMM23BQ5SRD1 257 aa7.13□□□□□ -1.27
CHD4-208ENST00000540960 SFRP5Q5T4F7 317 aa7.13□□□□□ -1.27
CHD4-208ENST00000540960 CYB5R2Q6BCY4 276 aa7.13□□□□□ -1.27
CHD4-208ENST00000540960 FAHD2BQ6P2I3 314 aaPredicted RBP7.13□□□□□ -1.27
CHD4-208ENST00000540960 BHLHA15Q7RTS1 189 aaPredicted RBP7.13□□□□□ -1.27
CHD4-208ENST00000540960 MDP1Q86V88 176 aa7.13□□□□□ -1.27
CHD4-208ENST00000540960 LSRQ86X29 649 aaPredicted RBP7.13□□□□□ -1.27
CHD4-208ENST00000540960 ARRDC1Q8N5I2 433 aa7.13□□□□□ -1.27
CHD4-208ENST00000540960 PIGCQ92535 297 aa7.13□□□□□ -1.27
CHD4-208ENST00000540960 SLC7A6Q92536 515 aa7.13□□□□□ -1.27
CHD4-208ENST00000540960 DACT3Q96B18 629 aaPredicted RBP7.13□□□□□ -1.27
CHD4-208ENST00000540960 FAHD2AQ96GK7 314 aa7.13□□□□□ -1.27
CHD4-208ENST00000540960 OCSTAMPQ9BR26 566 aa7.13□□□□□ -1.27
CHD4-208ENST00000540960 RTL8AQ9BWD3 113 aa7.13□□□□□ -1.27
CHD4-208ENST00000540960 PKIBQ9C010 78 aa7.13□□□□□ -1.27
CHD4-208ENST00000540960 SELENOIQ9C0D9 397 aa7.13□□□□□ -1.27
CHD4-208ENST00000540960 LPAR5Q9H1C0 372 aa7.13□□□□□ -1.27
CHD4-208ENST00000540960 NOX3Q9HBY0 568 aa7.13□□□□□ -1.27
CHD4-208ENST00000540960 SLC2A8Q9NY64 477 aa7.13□□□□□ -1.27
CHD4-208ENST00000540960 KLK11Q9UBX7 282 aa7.13□□□□□ -1.27
CHD4-208ENST00000540960 LAMP3Q9UQV4 416 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms