RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 GPR12P47775 334 aa8.31□□□□□ -1.08
TTC39C-203ENST00000540918 KLF3P57682 345 aaPredicted RBP8.31□□□□□ -1.08
TTC39C-203ENST00000540918 BTG1P62324 171 aa8.31□□□□□ -1.08
TTC39C-203ENST00000540918 TESK1Q15569 626 aa8.31□□□□□ -1.08
TTC39C-203ENST00000540918 MICBQ29980 383 aa8.31□□□□□ -1.08
TTC39C-203ENST00000540918 PRAMEF5Q5TYX0 476 aa8.31□□□□□ -1.08
TTC39C-203ENST00000540918 TMEM108Q6UXF1 575 aa8.31□□□□□ -1.08
TTC39C-203ENST00000540918 C1QL2Q7Z5L3 287 aa8.31□□□□□ -1.08
TTC39C-203ENST00000540918 HPSE2Q8WWQ2 592 aa8.31□□□□□ -1.08
TTC39C-203ENST00000540918 PINX1Q96BK5 328 aaKnown RBP8.31□□□□□ -1.08
TTC39C-203ENST00000540918 ZNF426Q9BUY5 554 aa8.31□□□□□ -1.08
TTC39C-203ENST00000540918 SLC26A1Q9H2B4 701 aa8.31□□□□□ -1.08
TTC39C-203ENST00000540918 PPP1R3EQ9H7J1 279 aa8.31□□□□□ -1.08
TTC39C-203ENST00000540918 AK3Q9UIJ7 227 aa8.31□□□□□ -1.08
TTC39C-203ENST00000540918 CLDN16Q9Y5I7 305 aa8.31□□□□□ -1.08
TTC39C-203ENST00000540918 LYPD3O95274 346 aa8.31□□□□□ -1.08
TTC39C-203ENST00000540918 NPBWR2P48146 333 aa8.31□□□□□ -1.08
TTC39C-203ENST00000540918 AESQ08117 197 aa8.31□□□□□ -1.08
TTC39C-203ENST00000540918 UBE2V2Q15819 145 aa8.31□□□□□ -1.08
TTC39C-203ENST00000540918 TMUB2Q71RG4 321 aa8.31□□□□□ -1.08
TTC39C-203ENST00000540918 OR4A16Q8NH70 328 aa8.31□□□□□ -1.08
TTC39C-203ENST00000540918 UQCC2Q9BRT2 126 aa8.31□□□□□ -1.08
TTC39C-203ENST00000540918 ZNF703Q9H7S9 590 aaPredicted RBP8.31□□□□□ -1.08
TTC39C-203ENST00000540918 PARD6AQ9NPB6 346 aa8.31□□□□□ -1.08
TTC39C-203ENST00000540918 RPH3ALQ9UNE2 315 aa8.31□□□□□ -1.08
TTC39C-203ENST00000540918 KCNK7Q9Y2U2 307 aa8.31□□□□□ -1.08
TTC39C-203ENST00000540918 TANC1Q9C0D5 1861 aa8.31□□□□□ -1.08
TTC39C-203ENST00000540918 NDUFB6O95139 128 aa8.31□□□□□ -1.08
TTC39C-203ENST00000540918 GZMKP49863 264 aa8.31□□□□□ -1.08
TTC39C-203ENST00000540918 RPS23P62266 143 aaKnown RBP8.31□□□□□ -1.08
TTC39C-203ENST00000540918 ZP4Q12836 540 aa8.31□□□□□ -1.08
TTC39C-203ENST00000540918 KRBOX4Q5JUW0 171 aa8.31□□□□□ -1.08
TTC39C-203ENST00000540918 ATPAF1Q5TC12 328 aaPredicted RBP8.31□□□□□ -1.08
TTC39C-203ENST00000540918 ZNF767PQ75MW2 155 aa8.31□□□□□ -1.08
TTC39C-203ENST00000540918 ZCCHC24Q8N2G6 241 aaKnown RBP8.31□□□□□ -1.08
TTC39C-203ENST00000540918 OR13C8Q8NGS7 320 aa8.31□□□□□ -1.08
TTC39C-203ENST00000540918 HAS2Q92819 552 aa8.31□□□□□ -1.08
TTC39C-203ENST00000540918 PECRQ9BY49 303 aa8.31□□□□□ -1.08
TTC39C-203ENST00000540918 PLK3Q9H4B4 646 aa8.31□□□□□ -1.08
TTC39C-203ENST00000540918 PLEKHF2Q9H8W4 249 aa8.31□□□□□ -1.08
TTC39C-203ENST00000540918 RAXQ9Y2V3 346 aa8.31□□□□□ -1.08
TTC39C-203ENST00000540918 RFPL4AA6NLU0 287 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 SERPINE3A8MV23 424 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 ATP6V1G2-DDX39BF2Z307 99 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 RFPL4AL1F8VTS6 287 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 PDCD6O75340 191 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 HEXAP06865 529 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 APELAP0DMC3 54 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 COX7A1P24310 79 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 PTBP1P26599 531 aaKnown RBP eCLIP8.3□□□□□ -1.08
TTC39C-203ENST00000540918 SLC6A1P30531 599 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 HOXA6P31267 233 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 HOXA1P49639 335 aaPredicted RBP8.3□□□□□ -1.08
TTC39C-203ENST00000540918 LGALS4P56470 323 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 SMIM21Q3B7S5 101 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 OR10X1Q8NGY0 326 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 SLC25A38Q96DW6 304 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 PRRX2Q99811 253 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 SLA2Q9H6Q3 261 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 COL6A3P12111 3177 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 ANKHD1Q8IWZ3 2542 aaKnown RBP8.3□□□□□ -1.08
TTC39C-203ENST00000540918 HMGB3O15347 200 aaKnown RBP8.3□□□□□ -1.08
TTC39C-203ENST00000540918 PPIHO43447 177 aaKnown RBP8.3□□□□□ -1.08
TTC39C-203ENST00000540918 NEURL1O76050 574 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 GLAP06280 429 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 CELA3BP08861 270 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 ZNF17P17021 662 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 PSMB6P28072 239 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 TNFSF10P50591 281 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 F2RL1P55085 397 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 FOXO1Q12778 655 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 H2BFWTQ7Z2G1 175 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 CCDC28AQ8IWP9 274 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 LYG1Q8N1E2 194 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 ARHGEF39Q8N4T4 335 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 ST7LQ8TDW4 575 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 GALMQ96C23 342 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 PCDHGA9Q9Y5G4 932 aaKnown RBP8.3□□□□□ -1.08
TTC39C-203ENST00000540918 NKX6-3A6NJ46 265 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 M0R1X1 148 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 ST8SIA3O43173 380 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 C1QBP02746 253 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 ALDH3B1P43353 468 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 PLAURQ03405 335 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 PDZK1IP1Q13113 114 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 GGTLC2Q14390 218 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 ADAD2Q8NCV1 583 aaKnown RBP8.3□□□□□ -1.08
TTC39C-203ENST00000540918 GMPPAQ96IJ6 420 aaPredicted RBP8.3□□□□□ -1.08
TTC39C-203ENST00000540918 KLK13Q9UKR3 277 aa8.3□□□□□ -1.08
TTC39C-203ENST00000540918 KIF26AQ9ULI4 1882 aaPredicted RBP8.3□□□□□ -1.08
TTC39C-203ENST00000540918 FREM1Q5H8C1 2179 aa8.29□□□□□ -1.08
TTC39C-203ENST00000540918 NME2P1O60361 137 aa8.29□□□□□ -1.08
TTC39C-203ENST00000540918 CLPSP04118 112 aa8.29□□□□□ -1.08
TTC39C-203ENST00000540918 CEACAM1P13688 526 aa8.29□□□□□ -1.08
TTC39C-203ENST00000540918 BAXQ07812 192 aa8.29□□□□□ -1.08
TTC39C-203ENST00000540918 PDLIM3Q53GG5 364 aaPredicted RBP8.29□□□□□ -1.08
TTC39C-203ENST00000540918 LINC00114Q6XXX2 140 aa8.29□□□□□ -1.08
TTC39C-203ENST00000540918 LYG2Q86SG7 212 aa8.29□□□□□ -1.08
TTC39C-203ENST00000540918 C20orf24Q9BUV8 137 aa8.29□□□□□ -1.08
TTC39C-203ENST00000540918 PRELID3BQ9Y3B1 194 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms