RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 ALPLP05186 524 aa11.67□□□□□ -0.54
MSRB3-209ENST00000540804 UBCP0CG48 685 aaKnown RBP11.67□□□□□ -0.54
MSRB3-209ENST00000540804 PRKACAP17612 351 aa11.67□□□□□ -0.54
MSRB3-209ENST00000540804 RBP2P50120 134 aa11.67□□□□□ -0.54
MSRB3-209ENST00000540804 ATP1B3P54709 279 aa11.67□□□□□ -0.54
MSRB3-209ENST00000540804 MTCP1P56278 107 aa11.67□□□□□ -0.54
MSRB3-209ENST00000540804 CDC42P60953 191 aa11.67□□□□□ -0.54
MSRB3-209ENST00000540804 ACTA2P62736 377 aa11.67□□□□□ -0.54
MSRB3-209ENST00000540804 ACTG2P63267 376 aa11.67□□□□□ -0.54
MSRB3-209ENST00000540804 ACTC1P68032 377 aa11.67□□□□□ -0.54
MSRB3-209ENST00000540804 ACTA1P68133 377 aa11.67□□□□□ -0.54
MSRB3-209ENST00000540804 ZNF91Q05481 1191 aa11.67□□□□□ -0.54
MSRB3-209ENST00000540804 CNN3Q15417 329 aaKnown RBP11.67□□□□□ -0.54
MSRB3-209ENST00000540804 OR5D18Q8NGL1 313 aa11.67□□□□□ -0.54
MSRB3-209ENST00000540804 CFHR4Q92496 578 aa11.67□□□□□ -0.54
MSRB3-209ENST00000540804 RFKQ969G6 155 aa11.67□□□□□ -0.54
MSRB3-209ENST00000540804 ZNF714Q96N38 554 aa11.67□□□□□ -0.54
MSRB3-209ENST00000540804 OR5M11Q96RB7 305 aa11.67□□□□□ -0.54
MSRB3-209ENST00000540804 SERTAD4Q9NUC0 356 aa11.67□□□□□ -0.54
MSRB3-209ENST00000540804 IMPAD1Q9NX62 359 aa11.67□□□□□ -0.54
MSRB3-209ENST00000540804 TCF19Q9Y242 345 aa11.67□□□□□ -0.54
MSRB3-209ENST00000540804 DAPL1A0PJW8 107 aa11.66□□□□□ -0.54
MSRB3-209ENST00000540804 FAM172BPA6NC97 362 aa11.66□□□□□ -0.54
MSRB3-209ENST00000540804 VGLL3A8MV65 326 aa11.66□□□□□ -0.54
MSRB3-209ENST00000540804 E9PQ18 207 aa11.66□□□□□ -0.54
MSRB3-209ENST00000540804 J3QLW9 94 aa11.66□□□□□ -0.54
MSRB3-209ENST00000540804 PRB2P02812 416 aaPredicted RBP11.66□□□□□ -0.54
MSRB3-209ENST00000540804 CD28P10747 220 aa11.66□□□□□ -0.54
MSRB3-209ENST00000540804 ZNF19P17023 458 aa11.66□□□□□ -0.54
MSRB3-209ENST00000540804 OR3A1P47881 315 aa11.66□□□□□ -0.54
MSRB3-209ENST00000540804 TMED1Q13445 227 aa11.66□□□□□ -0.54
MSRB3-209ENST00000540804 KPNB1Q14974 876 aaKnown RBP11.66□□□□□ -0.54
MSRB3-209ENST00000540804 NSUN5P1Q3KNT7 163 aa11.66□□□□□ -0.54
MSRB3-209ENST00000540804 TMEM95Q3KNT9 176 aa11.66□□□□□ -0.54
MSRB3-209ENST00000540804 FBLN7Q53RD9 439 aa11.66□□□□□ -0.54
MSRB3-209ENST00000540804 FAM58AQ8N1B3 248 aa11.66□□□□□ -0.54
MSRB3-209ENST00000540804 ZNF676Q8N7Q3 588 aa11.66□□□□□ -0.54
MSRB3-209ENST00000540804 OR11H6Q8NGC7 330 aa11.66□□□□□ -0.54
MSRB3-209ENST00000540804 PP6455Q8WZ26 134 aa11.66□□□□□ -0.54
MSRB3-209ENST00000540804 MBOAT4Q96T53 435 aa11.66□□□□□ -0.54
MSRB3-209ENST00000540804 CDCA4Q9BXL8 241 aa11.66□□□□□ -0.54
MSRB3-209ENST00000540804 NPFFR1Q9GZQ6 430 aa11.66□□□□□ -0.54
MSRB3-209ENST00000540804 RANBP3Q9H6Z4 567 aaPredicted RBP11.66□□□□□ -0.54
MSRB3-209ENST00000540804 ING3Q9NXR8 418 aa11.66□□□□□ -0.54
MSRB3-209ENST00000540804 GSTK1Q9Y2Q3 226 aa11.66□□□□□ -0.54
MSRB3-209ENST00000540804 TBL2Q9Y4P3 447 aaKnown RBP11.66□□□□□ -0.54
MSRB3-209ENST00000540804 IGHV2-26A0A0B4J1V2 119 aa11.65□□□□□ -0.54
MSRB3-209ENST00000540804 TRBV2A0A0J9YWF9 115 aa11.65□□□□□ -0.54
MSRB3-209ENST00000540804 hADV38S2A0JD32 116 aa11.65□□□□□ -0.54
MSRB3-209ENST00000540804 SLC16A6O15403 523 aa11.65□□□□□ -0.54
MSRB3-209ENST00000540804 ZNF20P17024 532 aa11.65□□□□□ -0.54
MSRB3-209ENST00000540804 CD24P25063 80 aa11.65□□□□□ -0.54
MSRB3-209ENST00000540804 PEX2P28328 305 aa11.65□□□□□ -0.54
MSRB3-209ENST00000540804 GDNFP39905 211 aa11.65□□□□□ -0.54
MSRB3-209ENST00000540804 BLCAPP62952 87 aa11.65□□□□□ -0.54
MSRB3-209ENST00000540804 MEF2CQ06413 473 aaPredicted RBP11.65□□□□□ -0.54
MSRB3-209ENST00000540804 PDZK1IP1Q13113 114 aa11.65□□□□□ -0.54
MSRB3-209ENST00000540804 UTF1Q5T230 341 aa11.65□□□□□ -0.54
MSRB3-209ENST00000540804 PRAMEF5Q5TYX0 476 aa11.65□□□□□ -0.54
MSRB3-209ENST00000540804 TMEM244Q5VVB8 128 aa11.65□□□□□ -0.54
MSRB3-209ENST00000540804 LHFPL3Q86UP9 236 aa11.65□□□□□ -0.54
MSRB3-209ENST00000540804 CCDC54Q8NEL0 328 aa11.65□□□□□ -0.54
MSRB3-209ENST00000540804 DNAAF1Q8NEP3 725 aa11.65□□□□□ -0.54
MSRB3-209ENST00000540804 OR13C9Q8NGT0 318 aa11.65□□□□□ -0.54
MSRB3-209ENST00000540804 C10orf35Q96D05 121 aa11.65□□□□□ -0.54
MSRB3-209ENST00000540804 LGALS12Q96DT0 336 aa11.65□□□□□ -0.54
MSRB3-209ENST00000540804 MALSU1Q96EH3 234 aa11.65□□□□□ -0.54
MSRB3-209ENST00000540804 PELI1Q96FA3 418 aa11.65□□□□□ -0.54
MSRB3-209ENST00000540804 HRASLS5Q96KN8 279 aa11.65□□□□□ -0.54
MSRB3-209ENST00000540804 C4orf36Q96KX1 117 aa11.65□□□□□ -0.54
MSRB3-209ENST00000540804 OPALINQ96PE5 141 aa11.65□□□□□ -0.54
MSRB3-209ENST00000540804 ISG20L2Q9H9L3 353 aaKnown RBP11.65□□□□□ -0.54
MSRB3-209ENST00000540804 RAB18Q9NP72 206 aa11.65□□□□□ -0.54
MSRB3-209ENST00000540804 ABCB10Q9NRK6 738 aa11.65□□□□□ -0.54
MSRB3-209ENST00000540804 SESN1Q9Y6P5 492 aa11.65□□□□□ -0.54
MSRB3-209ENST00000540804 TGP01266 2768 aa11.65□□□□□ -0.54
MSRB3-209ENST00000540804 DNAH3Q8TD57 4116 aa11.64□□□□□ -0.55
MSRB3-209ENST00000540804 E9PI62 339 aa11.64□□□□□ -0.55
MSRB3-209ENST00000540804 OR2H2O95918 312 aa11.64□□□□□ -0.55
MSRB3-209ENST00000540804 RBP4P02753 201 aa11.64□□□□□ -0.55
MSRB3-209ENST00000540804 ISG15P05161 165 aa11.64□□□□□ -0.55
MSRB3-209ENST00000540804 HTR1AP08908 422 aa11.64□□□□□ -0.55
MSRB3-209ENST00000540804 GLIPR1P48060 266 aa11.64□□□□□ -0.55
MSRB3-209ENST00000540804 SNRPGP62308 76 aaKnown RBP11.64□□□□□ -0.55
MSRB3-209ENST00000540804 SLC34A1Q06495 639 aa11.64□□□□□ -0.55
MSRB3-209ENST00000540804 SCN1BQ07699 218 aa11.64□□□□□ -0.55
MSRB3-209ENST00000540804 ZNF146Q15072 292 aa11.64□□□□□ -0.55
MSRB3-209ENST00000540804 FDX2Q6P4F2 183 aa11.64□□□□□ -0.55
MSRB3-209ENST00000540804 LIAT1Q6ZQX7 453 aa11.64□□□□□ -0.55
MSRB3-209ENST00000540804 LHFPL2Q6ZUX7 228 aa11.64□□□□□ -0.55
MSRB3-209ENST00000540804 UTS2BQ765I0 119 aa11.64□□□□□ -0.55
MSRB3-209ENST00000540804 TRAPPC6BQ86SZ2 158 aa11.64□□□□□ -0.55
MSRB3-209ENST00000540804 CBR4Q8N4T8 237 aa11.64□□□□□ -0.55
MSRB3-209ENST00000540804 OR13C3Q8NGS6 347 aa11.64□□□□□ -0.55
MSRB3-209ENST00000540804 RPS4Y2Q8TD47 263 aa11.64□□□□□ -0.55
MSRB3-209ENST00000540804 TRUB1Q8WWH5 349 aaKnown RBP11.64□□□□□ -0.55
MSRB3-209ENST00000540804 FOXRED1Q96CU9 486 aaPredicted RBP11.64□□□□□ -0.55
MSRB3-209ENST00000540804 TMEM133Q9H2Q1 129 aa11.64□□□□□ -0.55
MSRB3-209ENST00000540804 HMG20AQ9NP66 347 aa11.64□□□□□ -0.55
MSRB3-209ENST00000540804 AMBNQ9NP70 447 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms