RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 RAB18Q9NP72 206 aa17.02■□□□□ 0.32
CHFR-217ENST00000540537 IL36RNQ9UBH0 155 aa17.02■□□□□ 0.32
CHFR-217ENST00000540537 FAM90A8PA6NJQ4 464 aa17.01■□□□□ 0.31
CHFR-217ENST00000540537 IGHA1P01876 353 aa17.01■□□□□ 0.31
CHFR-217ENST00000540537 BCL3P20749 454 aa17.01■□□□□ 0.31
CHFR-217ENST00000540537 PEX2P28328 305 aa17.01■□□□□ 0.31
CHFR-217ENST00000540537 NPBWR2P48146 333 aa17.01■□□□□ 0.31
CHFR-217ENST00000540537 PDZK1IP1Q13113 114 aa17.01■□□□□ 0.31
CHFR-217ENST00000540537 LY6EQ16553 131 aa17.01■□□□□ 0.31
CHFR-217ENST00000540537 SPIN3Q5JUX0 258 aa17.01■□□□□ 0.31
CHFR-217ENST00000540537 ASPHD2Q6ICH7 369 aa17.01■□□□□ 0.31
CHFR-217ENST00000540537 SLC35E4Q6ICL7 350 aa17.01■□□□□ 0.31
CHFR-217ENST00000540537 CRIP3Q6Q6R5 217 aa17.01■□□□□ 0.31
CHFR-217ENST00000540537 LIAT1Q6ZQX7 453 aa17.01■□□□□ 0.31
CHFR-217ENST00000540537 ZBTB49Q6ZSB9 765 aa17.01■□□□□ 0.31
CHFR-217ENST00000540537 OR51A4Q8NGJ6 313 aa17.01■□□□□ 0.31
CHFR-217ENST00000540537 OR13C3Q8NGS6 347 aa17.01■□□□□ 0.31
CHFR-217ENST00000540537 OR10AC1Q8NH08 325 aa17.01■□□□□ 0.31
CHFR-217ENST00000540537 ZNF714Q96N38 554 aa17.01■□□□□ 0.31
CHFR-217ENST00000540537 SLC29A1Q99808 456 aa17.01■□□□□ 0.31
CHFR-217ENST00000540537 INPP5EQ9NRR6 644 aa17.01■□□□□ 0.31
CHFR-217ENST00000540537 FBLN5Q9UBX5 448 aa17.01■□□□□ 0.31
CHFR-217ENST00000540537 TBL2Q9Y4P3 447 aaKnown RBP17.01■□□□□ 0.31
CHFR-217ENST00000540537 hADV38S2A0JD32 116 aa17■□□□□ 0.31
CHFR-217ENST00000540537 ODF3BA8MYP8 253 aa17■□□□□ 0.31
CHFR-217ENST00000540537 FADS2O95864 444 aaKnown RBP17■□□□□ 0.31
CHFR-217ENST00000540537 RPSAP08865 295 aaKnown RBP17■□□□□ 0.31
CHFR-217ENST00000540537 OCM2P0CE71 109 aa17■□□□□ 0.31
CHFR-217ENST00000540537 OCMP0CE72 109 aaPredicted RBP17■□□□□ 0.31
CHFR-217ENST00000540537 IGHV1-8P0DP01 117 aa17■□□□□ 0.31
CHFR-217ENST00000540537 GABRR1P24046 479 aa17■□□□□ 0.31
CHFR-217ENST00000540537 GABRA5P31644 462 aa17■□□□□ 0.31
CHFR-217ENST00000540537 RAB40BQ12829 278 aa17■□□□□ 0.31
CHFR-217ENST00000540537 MRPL28Q13084 256 aaKnown RBP17■□□□□ 0.31
CHFR-217ENST00000540537 EDDM3AQ14507 147 aa17■□□□□ 0.31
CHFR-217ENST00000540537 GRK1Q15835 563 aa17■□□□□ 0.31
CHFR-217ENST00000540537 TCF23Q7RTU1 214 aa17■□□□□ 0.31
CHFR-217ENST00000540537 LHFPL4Q7Z7J7 247 aa17■□□□□ 0.31
CHFR-217ENST00000540537 LHFPL3Q86UP9 236 aa17■□□□□ 0.31
CHFR-217ENST00000540537 PQLC1Q8N2U9 271 aa17■□□□□ 0.31
CHFR-217ENST00000540537 ZNF676Q8N7Q3 588 aa17■□□□□ 0.31
CHFR-217ENST00000540537 OR52N4Q8NGI2 321 aa17■□□□□ 0.31
CHFR-217ENST00000540537 FOXRED1Q96CU9 486 aaPredicted RBP17■□□□□ 0.31
CHFR-217ENST00000540537 RANBP3Q9H6Z4 567 aaPredicted RBP17■□□□□ 0.31
CHFR-217ENST00000540537 HMG20AQ9NP66 347 aa17■□□□□ 0.31
CHFR-217ENST00000540537 GLS2Q9UI32 602 aa17■□□□□ 0.31
CHFR-217ENST00000540537 MYRFQ9Y2G1 1151 aa17■□□□□ 0.31
CHFR-217ENST00000540537 LINC00312Q9Y6C7 94 aa17■□□□□ 0.31
CHFR-217ENST00000540537 LOC100130705A0A1B0GUX0 176 aa16.99■□□□□ 0.31
CHFR-217ENST00000540537 VGLL3A8MV65 326 aa16.99■□□□□ 0.31
CHFR-217ENST00000540537 EBAG9O00559 213 aa16.99■□□□□ 0.31
CHFR-217ENST00000540537 PSPNO60542 156 aa16.99■□□□□ 0.31
CHFR-217ENST00000540537 ARG1P05089 322 aa16.99■□□□□ 0.31
CHFR-217ENST00000540537 PRKACAP17612 351 aa16.99■□□□□ 0.31
CHFR-217ENST00000540537 PAX6P26367 422 aa16.99■□□□□ 0.31
CHFR-217ENST00000540537 ZNF626Q68DY1 528 aa16.99■□□□□ 0.31
CHFR-217ENST00000540537 OR11H6Q8NGC7 330 aa16.99■□□□□ 0.31
CHFR-217ENST00000540537 OR13C9Q8NGT0 318 aa16.99■□□□□ 0.31
CHFR-217ENST00000540537 PPP1R35Q8TAP8 253 aa16.99■□□□□ 0.31
CHFR-217ENST00000540537 ZNF649Q9BS31 505 aa16.99■□□□□ 0.31
CHFR-217ENST00000540537 MMP27Q9H306 513 aa16.99■□□□□ 0.31
CHFR-217ENST00000540537 ISG20L2Q9H9L3 353 aaKnown RBP16.99■□□□□ 0.31
CHFR-217ENST00000540537 NEK6Q9HC98 313 aa16.99■□□□□ 0.31
CHFR-217ENST00000540537 ERVK13-1Q9NX77 482 aa16.99■□□□□ 0.31
CHFR-217ENST00000540537 MEX3AA1L020 520 aaKnown RBP16.98■□□□□ 0.31
CHFR-217ENST00000540537 TMEM212A6NML5 194 aa16.98■□□□□ 0.31
CHFR-217ENST00000540537 MGST3O14880 152 aa16.98■□□□□ 0.31
CHFR-217ENST00000540537 KDM4BO94953 1096 aa16.98■□□□□ 0.31
CHFR-217ENST00000540537 DUSP1P28562 367 aa16.98■□□□□ 0.31
CHFR-217ENST00000540537 ERP29P30040 261 aaKnown RBP16.98■□□□□ 0.31
CHFR-217ENST00000540537 C11orf88Q6PI97 169 aa16.98■□□□□ 0.31
CHFR-217ENST00000540537 SAXO1Q8IYX7 474 aa16.98■□□□□ 0.31
CHFR-217ENST00000540537 OR4S1Q8NGB4 309 aa16.98■□□□□ 0.31
CHFR-217ENST00000540537 OR4C13Q8NGP0 309 aa16.98■□□□□ 0.31
CHFR-217ENST00000540537 PIFOQ8TCI5 191 aa16.98■□□□□ 0.31
CHFR-217ENST00000540537 RFT1Q96AA3 541 aa16.98■□□□□ 0.31
CHFR-217ENST00000540537 MALSU1Q96EH3 234 aa16.98■□□□□ 0.31
CHFR-217ENST00000540537 CHST6Q9GZX3 395 aa16.98■□□□□ 0.31
CHFR-217ENST00000540537 ZCCHC4Q9H5U6 513 aa16.98■□□□□ 0.31
CHFR-217ENST00000540537 RHOFQ9HBH0 211 aa16.98■□□□□ 0.31
CHFR-217ENST00000540537 AMBNQ9NP70 447 aa16.98■□□□□ 0.31
CHFR-217ENST00000540537 MRPS18AQ9NVS2 196 aaKnown RBP16.98■□□□□ 0.31
CHFR-217ENST00000540537 FAM118AQ9NWS6 357 aa16.98■□□□□ 0.31
CHFR-217ENST00000540537 RPL36Q9Y3U8 105 aaKnown RBP16.98■□□□□ 0.31
CHFR-217ENST00000540537 IGKV1-12A0A0C4DH73 117 aa16.97■□□□□ 0.31
CHFR-217ENST00000540537 ALX3O95076 343 aa16.97■□□□□ 0.31
CHFR-217ENST00000540537 IGKV1D-12P01611 117 aa16.97■□□□□ 0.31
CHFR-217ENST00000540537 CCDC159P0C7I6 412 aa16.97■□□□□ 0.31
CHFR-217ENST00000540537 KIR2DS4P43632 304 aa16.97■□□□□ 0.31
CHFR-217ENST00000540537 OR3A1P47881 315 aa16.97■□□□□ 0.31
CHFR-217ENST00000540537 TPRX1Q8N7U7 411 aa16.97■□□□□ 0.31
CHFR-217ENST00000540537 HAVCR2Q8TDQ0 301 aa16.97■□□□□ 0.31
CHFR-217ENST00000540537 SPACA5Q96QH8 159 aa16.97■□□□□ 0.31
CHFR-217ENST00000540537 COMMD4Q9H0A8 199 aa16.97■□□□□ 0.31
CHFR-217ENST00000540537 EXOSC4Q9NPD3 245 aaKnown RBP16.97■□□□□ 0.31
CHFR-217ENST00000540537 SH2D1BO14796 132 aa16.96■□□□□ 0.31
CHFR-217ENST00000540537 ZFPL1O95159 310 aa16.96■□□□□ 0.31
CHFR-217ENST00000540537 CALCBP10092 127 aa16.96■□□□□ 0.31
CHFR-217ENST00000540537 EFNB2P52799 333 aa16.96■□□□□ 0.31
CHFR-217ENST00000540537 SNU13P55769 128 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms