RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 ACBD7Q8N6N7 88 aa10.6□□□□□ -0.71
SEMA4D-223ENST00000540475 ASCC1Q8N9N2 400 aaKnown RBP10.6□□□□□ -0.71
SEMA4D-223ENST00000540475 OR52N4Q8NGI2 321 aa10.6□□□□□ -0.71
SEMA4D-223ENST00000540475 OR13D1Q8NGV5 346 aa10.6□□□□□ -0.71
SEMA4D-223ENST00000540475 FGGYQ96C11 551 aa10.6□□□□□ -0.71
SEMA4D-223ENST00000540475 PELI1Q96FA3 418 aa10.6□□□□□ -0.71
SEMA4D-223ENST00000540475 ZNF714Q96N38 554 aa10.6□□□□□ -0.71
SEMA4D-223ENST00000540475 RHOFQ9HBH0 211 aa10.6□□□□□ -0.71
SEMA4D-223ENST00000540475 MRPS18AQ9NVS2 196 aaKnown RBP10.6□□□□□ -0.71
SEMA4D-223ENST00000540475 IMPAD1Q9NX62 359 aa10.6□□□□□ -0.71
SEMA4D-223ENST00000540475 LINC00312Q9Y6C7 94 aa10.6□□□□□ -0.71
SEMA4D-223ENST00000540475 PLXNB1O43157 2135 aa10.6□□□□□ -0.71
SEMA4D-223ENST00000540475 hADV38S2A0JD32 116 aa10.59□□□□□ -0.71
SEMA4D-223ENST00000540475 DAPL1A0PJW8 107 aa10.59□□□□□ -0.71
SEMA4D-223ENST00000540475 SNTNA6NMZ2 147 aa10.59□□□□□ -0.71
SEMA4D-223ENST00000540475 PSPNO60542 156 aa10.59□□□□□ -0.71
SEMA4D-223ENST00000540475 HAND1O96004 215 aa10.59□□□□□ -0.71
SEMA4D-223ENST00000540475 IGHA1P01876 353 aa10.59□□□□□ -0.71
SEMA4D-223ENST00000540475 RPSAP08865 295 aaKnown RBP10.59□□□□□ -0.71
SEMA4D-223ENST00000540475 BCL3P20749 454 aa10.59□□□□□ -0.71
SEMA4D-223ENST00000540475 COX7A1P24310 79 aa10.59□□□□□ -0.71
SEMA4D-223ENST00000540475 AZGP1P25311 298 aaKnown RBP10.59□□□□□ -0.71
SEMA4D-223ENST00000540475 PEX2P28328 305 aa10.59□□□□□ -0.71
SEMA4D-223ENST00000540475 MTCP1P56278 107 aa10.59□□□□□ -0.71
SEMA4D-223ENST00000540475 KPNB1Q14974 876 aaKnown RBP10.59□□□□□ -0.71
SEMA4D-223ENST00000540475 HERPUD1Q15011 391 aa10.59□□□□□ -0.71
SEMA4D-223ENST00000540475 LY6EQ16553 131 aa10.59□□□□□ -0.71
SEMA4D-223ENST00000540475 ZNF782Q6ZMW2 699 aaPredicted RBP10.59□□□□□ -0.71
SEMA4D-223ENST00000540475 SYS1Q8N2H4 156 aa10.59□□□□□ -0.71
SEMA4D-223ENST00000540475 OR4C13Q8NGP0 309 aa10.59□□□□□ -0.71
SEMA4D-223ENST00000540475 RHOXF1Q8NHV9 184 aa10.59□□□□□ -0.71
SEMA4D-223ENST00000540475 CORO2AQ92828 525 aa10.59□□□□□ -0.71
SEMA4D-223ENST00000540475 EMG1Q92979 244 aaKnown RBP10.59□□□□□ -0.71
SEMA4D-223ENST00000540475 FOXRED1Q96CU9 486 aaPredicted RBP10.59□□□□□ -0.71
SEMA4D-223ENST00000540475 LGALS12Q96DT0 336 aa10.59□□□□□ -0.71
SEMA4D-223ENST00000540475 HMG20AQ9NP66 347 aa10.59□□□□□ -0.71
SEMA4D-223ENST00000540475 RBFOX1Q9NWB1 397 aaKnown RBP10.59□□□□□ -0.71
SEMA4D-223ENST00000540475 IL36RNQ9UBH0 155 aa10.59□□□□□ -0.71
SEMA4D-223ENST00000540475 HHLA2Q9UM44 414 aa10.59□□□□□ -0.71
SEMA4D-223ENST00000540475 TCF19Q9Y242 345 aa10.59□□□□□ -0.71
SEMA4D-223ENST00000540475 ORC6Q9Y5N6 252 aa10.59□□□□□ -0.71
SEMA4D-223ENST00000540475 IGKV1-12A0A0C4DH73 117 aa10.58□□□□□ -0.72
SEMA4D-223ENST00000540475 A6NDX4 124 aa10.58□□□□□ -0.72
SEMA4D-223ENST00000540475 MGST3O14880 152 aa10.58□□□□□ -0.72
SEMA4D-223ENST00000540475 KDM4BO94953 1096 aa10.58□□□□□ -0.72
SEMA4D-223ENST00000540475 TSPAN15O95858 294 aa10.58□□□□□ -0.72
SEMA4D-223ENST00000540475 CYB5AP00167 134 aa10.58□□□□□ -0.72
SEMA4D-223ENST00000540475 IGKV1D-12P01611 117 aa10.58□□□□□ -0.72
SEMA4D-223ENST00000540475 HTR1AP08908 422 aa10.58□□□□□ -0.72
SEMA4D-223ENST00000540475 PIPP12273 146 aaPredicted RBP10.58□□□□□ -0.72
SEMA4D-223ENST00000540475 EDDM3BP56851 147 aa10.58□□□□□ -0.72
SEMA4D-223ENST00000540475 ACTA2P62736 377 aa10.58□□□□□ -0.72
SEMA4D-223ENST00000540475 ACTG2P63267 376 aa10.58□□□□□ -0.72
SEMA4D-223ENST00000540475 ALKBH1Q13686 389 aaKnown RBP10.58□□□□□ -0.72
SEMA4D-223ENST00000540475 GALEQ14376 348 aa10.58□□□□□ -0.72
SEMA4D-223ENST00000540475 C2orf68Q2NKX9 166 aa10.58□□□□□ -0.72
SEMA4D-223ENST00000540475 ZIK1Q3SY52 487 aaPredicted RBP10.58□□□□□ -0.72
SEMA4D-223ENST00000540475 MINOS1Q5TGZ0 78 aa10.58□□□□□ -0.72
SEMA4D-223ENST00000540475 CCBE1Q6UXH8 406 aaPredicted RBP10.58□□□□□ -0.72
SEMA4D-223ENST00000540475 C10orf67Q8IYJ2 551 aa10.58□□□□□ -0.72
SEMA4D-223ENST00000540475 SAXO1Q8IYX7 474 aa10.58□□□□□ -0.72
SEMA4D-223ENST00000540475 CBR4Q8N4T8 237 aa10.58□□□□□ -0.72
SEMA4D-223ENST00000540475 OR51A4Q8NGJ6 313 aa10.58□□□□□ -0.72
SEMA4D-223ENST00000540475 OR10AC1Q8NH08 325 aa10.58□□□□□ -0.72
SEMA4D-223ENST00000540475 WIPF2Q8TF74 440 aaPredicted RBP10.58□□□□□ -0.72
SEMA4D-223ENST00000540475 OPALINQ96PE5 141 aa10.58□□□□□ -0.72
SEMA4D-223ENST00000540475 MYCBPQ99417 103 aaPredicted RBP10.58□□□□□ -0.72
SEMA4D-223ENST00000540475 NPFFR1Q9GZQ6 430 aa10.58□□□□□ -0.72
SEMA4D-223ENST00000540475 COMMD4Q9H0A8 199 aa10.58□□□□□ -0.72
SEMA4D-223ENST00000540475 UBE2J1Q9Y385 318 aaPredicted RBP10.58□□□□□ -0.72
SEMA4D-223ENST00000540475 MINOS1-NBL1R4GNA1 71 aa10.58□□□□□ -0.72
SEMA4D-223ENST00000540475 FAM90A22PA8MWA6 464 aa10.57□□□□□ -0.72
SEMA4D-223ENST00000540475 MPZL2O60487 215 aa10.57□□□□□ -0.72
SEMA4D-223ENST00000540475 ARG1P05089 322 aa10.57□□□□□ -0.72
SEMA4D-223ENST00000540475 CSN2P05814 226 aa10.57□□□□□ -0.72
SEMA4D-223ENST00000540475 DBTP11182 482 aaKnown RBP10.57□□□□□ -0.72
SEMA4D-223ENST00000540475 OR3A1P47881 315 aa10.57□□□□□ -0.72
SEMA4D-223ENST00000540475 MRPL28Q13084 256 aaKnown RBP10.57□□□□□ -0.72
SEMA4D-223ENST00000540475 GRK1Q15835 563 aa10.57□□□□□ -0.72
SEMA4D-223ENST00000540475 ZBTB49Q6ZSB9 765 aa10.57□□□□□ -0.72
SEMA4D-223ENST00000540475 RNF144BQ7Z419 303 aa10.57□□□□□ -0.72
SEMA4D-223ENST00000540475 PARP16Q8N5Y8 322 aa10.57□□□□□ -0.72
SEMA4D-223ENST00000540475 OR4S1Q8NGB4 309 aa10.57□□□□□ -0.72
SEMA4D-223ENST00000540475 OR2T6Q8NHC8 308 aa10.57□□□□□ -0.72
SEMA4D-223ENST00000540475 C4orf36Q96KX1 117 aa10.57□□□□□ -0.72
SEMA4D-223ENST00000540475 Q96MT0 163 aa10.57□□□□□ -0.72
SEMA4D-223ENST00000540475 TMEM133Q9H2Q1 129 aa10.57□□□□□ -0.72
SEMA4D-223ENST00000540475 ZNF702PQ9H963 129 aa10.57□□□□□ -0.72
SEMA4D-223ENST00000540475 INPP5EQ9NRR6 644 aa10.57□□□□□ -0.72
SEMA4D-223ENST00000540475 SERTAD4Q9NUC0 356 aa10.57□□□□□ -0.72
SEMA4D-223ENST00000540475 AASSQ9UDR5 926 aa10.57□□□□□ -0.72
SEMA4D-223ENST00000540475 MYRFQ9Y2G1 1151 aa10.57□□□□□ -0.72
SEMA4D-223ENST00000540475 SIGLEC9Q9Y336 463 aa10.57□□□□□ -0.72
SEMA4D-223ENST00000540475 SESN1Q9Y6P5 492 aa10.57□□□□□ -0.72
SEMA4D-223ENST00000540475 J3QLW9 94 aa10.56□□□□□ -0.72
SEMA4D-223ENST00000540475 SH2D1BO14796 132 aa10.56□□□□□ -0.72
SEMA4D-223ENST00000540475 ZNF19P17023 458 aa10.56□□□□□ -0.72
SEMA4D-223ENST00000540475 ZNF20P17024 532 aa10.56□□□□□ -0.72
SEMA4D-223ENST00000540475 PRKACAP17612 351 aa10.56□□□□□ -0.72
SEMA4D-223ENST00000540475 DUSP1P28562 367 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms