RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 GZMHP20718 246 aa8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 FPR2P25090 351 aa8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 IL24Q13007 206 aa8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 CEBPEQ15744 281 aa8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 TMEM183BQ1AE95 376 aa8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 WDR38Q5JTN6 314 aa8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 MRPL2Q5T653 305 aaKnown RBP8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 FAM90A2PQ658T7 463 aa8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 NUP54Q7Z3B4 507 aa8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 GRINAQ7Z429 371 aa8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 ZFP62Q8NB50 900 aaPredicted RBP8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 MOB3AQ96BX8 217 aa8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 C4orf45Q96LM5 186 aa8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 TSSK2Q96PF2 358 aa8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 LPAR4Q99677 370 aa8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 PCBD2Q9H0N5 130 aa8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 TUBD1Q9UJT1 453 aa8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 PILRBQ9UKJ0 227 aa8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 SLC7A11Q9UPY5 501 aa8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 ARHGEF17Q96PE2 2063 aaPredicted RBP8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 FAM221AA4D161 298 aa8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 C4orf47A7E2U8 309 aa8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 YPEL1O60688 119 aa8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 TRAPPC6AO75865 159 aa8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 UBE2G2P60604 165 aa8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 RPL23AP62750 156 aaKnown RBP8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 MRPL49Q13405 166 aaKnown RBP8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 RTN4RL2Q86UN3 420 aa8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 TGIF2LYQ8IUE0 185 aa8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 OR10S1Q8NGN2 331 aa8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 LMX1AQ8TE12 382 aa8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 YPEL2Q96QA6 119 aa8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 OR8B4Q96RC9 309 aa8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 ZNF552Q9H707 407 aaPredicted RBP8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 FSCN3Q9NQT6 498 aa8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 TAS2R4Q9NYW5 299 aa8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 AK3Q9UIJ7 227 aa8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 RBM7Q9Y580 266 aaKnown RBP8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 A0A0A6YYD5 115 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 IGHV2-70DA0A0C4DH43 119 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 E5RGE8 158 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 GPR137BO60478 399 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 CTSBP07858 339 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 GNB3P16520 340 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 GLRA1P23415 457 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 ERVS71-1P61550 626 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 RAB11AP62491 216 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 DUSP8Q13202 625 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 MPV17LQ2QL34 196 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 FBLN7Q53RD9 439 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 OCIAD2Q56VL3 154 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 SP5Q6BEB4 398 aaPredicted RBP8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 FBXW12Q6X9E4 464 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 C10orf53Q8N6V4 93 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 OR2D3Q8NGH3 330 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 OR2I1PQ8NGU4 316 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 OR2G3Q8NGZ4 309 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 CLDND2Q8NHS1 167 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 FNDC9Q8TBE3 224 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 THRSPQ92748 146 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 IL22RA2Q969J5 263 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 VAMP8Q9BV40 100 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 SF3B5Q9BWJ5 86 aaKnown RBP8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 CTDSP1Q9GZU7 261 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 NSG2Q9Y328 171 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 ENTPD2Q9Y5L3 495 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 COX11Q9Y6N1 276 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 FIGNL2A6NMB9 653 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 RPS27P42677 84 aaKnown RBP8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 SSR2P43308 183 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 EFNA3P52797 238 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 GPR18Q14330 331 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 LDLRAD2Q5SZI1 272 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 TPTE2P1Q5T6R2 138 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 H1FOOQ8IZA3 346 aaPredicted RBP8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 IL22RA1Q8N6P7 574 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 NECAP1Q8NC96 275 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 ZNF738Q8NE65 137 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 ZNF845Q96IR2 970 aaPredicted RBP8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 TBL1XR1Q9BZK7 514 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 OR10A5Q9H207 317 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 SDF2L1Q9HCN8 221 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 CACNA1EQ15878 2313 aa8.29□□□□□ -1.08
CTNNA1-243ENST00000540387 GOLGA4Q13439 2230 aaKnown RBP8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 NPIPA5A0A0B4J1W7 369 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 PATE3B3GLJ2 98 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 NPIPA7E9PJI5 369 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 KNG1P01042 644 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 IFNA21P01568 189 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 NBEAP1P0C6P0 100 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 NPIPA8P0DM63 369 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 RPS4Y1P22090 263 aaKnown RBP8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 CDC34P49427 236 aaPredicted RBP8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 ZNF41P51814 821 aaPredicted RBP8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 ACOT6Q3I5F7 207 aaPredicted RBP8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 ACTL10Q5JWF8 245 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 FBXO42Q6P3S6 717 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 UNQ5815/PRO19632Q6UWF5 114 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 ZNF793Q6ZN11 406 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 CDC20BQ86Y33 519 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms